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The map label for this gene is deoB

Identifier: 162447540

GI number: 162447540

Start: 714150

End: 715343

Strand: Direct

Name: deoB

Synonym: ACL_0680

Alternate gene names: 162447540

Gene position: 714150-715343 (Clockwise)

Preceding gene: 162447539

Following gene: 162447545

Centisome position: 47.71

GC content: 34.17

Gene sequence:

>1194_bases
ATGAGATTTAAAAGAGTATTTTTAATCGTCATGGACTCTTTAGGAGTCGGTGCATCAGAAGATGCAAATCAATATTTTAA
TGAAGGGGTAGACGATACAAAAGCAAATACGTTTGGTCATATTGCAGAAAGTATGGATCTTAGAATACCTAATTTAGAGA
AGCTTGGTGTAGGTAATATCATACCTATAAAAGGTACTAAATCAGTTGAATTATCCTCATCTTATGTAACAAAAATTCGT
GAAAAATCACTAGGAAAAGATACGATGACAGGTCATTGGGAAATCATGGGCTTGTATGTTACAACACCATTTCAAACCTT
TACAGACACTGGTTTTCCAAAAGAATTACTAGATGAATTAGAAGAAAGAACCGGACGTAAAATCATCGGTAATATCGCAG
CAAGTGGTACTGAAATATTAAAGGATTTAGGTGAAGAACACATGAGGACTGGAGACTTAATTGTCTACACATCCGCAGAC
AGTGTACTTCAAATTGCGATGCATGAAGAGATCATTCCTATTGAAGAACAATACAGAATTTCTGCAATTGCACGTGACAT
TACAATGAGACCAGACTGGAAAGTTGGACGTGTAATTACAAGACCATTCTTAGGTACAAATAAGGACAACTTTAAGCGCA
CAAGTAATAGAAAAGATTATGCATTAAAACCAAGTGAAGAGACAACTTTAAACTTCCTAAGTGATGCTAATTATGATGTC
ATCGCACTAGGTAAAATCAATGATATTTTTGATGGTTACGGTATCAATAAATACAGTAAAACAGTATCGAATGATGATGG
TATGAAACAGATTACAGAGTGGGCTAAAAAAGATTTTACAGGATTATGTTTCTTAAATCTAGTAGACTTTGATGCACTCT
ACGGACACCGCAGAGACCCTCATGGATATGGTAAAGCAATCATGGATATGGATAGTCAATTACCTGAATTAATGGCTAAT
TTAAATGAAGATGATTTACTCATTTTAACAGCTGATCATGGTAATGATCCAACCTATGTTGGTACCGATCATACAAGAGA
ATTTGTACCAATGATAGCTTATAGCAAGTCATTTAAATCAGGTGGTAGCCTACCAATACTTAATACATTTGCCGATTTAG
GAAGTACAATTTCTGATAACTTTAAAGTCAAAAAAACAGAGCATGGTGACAGTTTCTTAAGTAAATTAAAATAA

Upstream 100 bases:

>100_bases
ATGAAGATATATCGACTACACAAATCTATACACACATCTCACAATCAAGATTAAAACAAGTTTATAACAAAACTCATCCA
AGAGCAAAGGAGAATAACAA

Downstream 100 bases:

>100_bases
ATCAATGTTTACTAAATATAAACAAGGTGTAGAAATACTGCACCTTTTTATTTTGCAATAATATGACGAATAAAGTCTGA
ATGATGTATATAAATATTTT

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRFKRVFLIVMDSLGVGASEDANQYFNEGVDDTKANTFGHIAESMDLRIPNLEKLGVGNIIPIKGTKSVELSSSYVTKIR
EKSLGKDTMTGHWEIMGLYVTTPFQTFTDTGFPKELLDELEERTGRKIIGNIAASGTEILKDLGEEHMRTGDLIVYTSAD
SVLQIAMHEEIIPIEEQYRISAIARDITMRPDWKVGRVITRPFLGTNKDNFKRTSNRKDYALKPSEETTLNFLSDANYDV
IALGKINDIFDGYGINKYSKTVSNDDGMKQITEWAKKDFTGLCFLNLVDFDALYGHRRDPHGYGKAIMDMDSQLPELMAN
LNEDDLLILTADHGNDPTYVGTDHTREFVPMIAYSKSFKSGGSLPILNTFADLGSTISDNFKVKKTEHGDSFLSKLK

Sequences:

>Translated_397_residues
MRFKRVFLIVMDSLGVGASEDANQYFNEGVDDTKANTFGHIAESMDLRIPNLEKLGVGNIIPIKGTKSVELSSSYVTKIR
EKSLGKDTMTGHWEIMGLYVTTPFQTFTDTGFPKELLDELEERTGRKIIGNIAASGTEILKDLGEEHMRTGDLIVYTSAD
SVLQIAMHEEIIPIEEQYRISAIARDITMRPDWKVGRVITRPFLGTNKDNFKRTSNRKDYALKPSEETTLNFLSDANYDV
IALGKINDIFDGYGINKYSKTVSNDDGMKQITEWAKKDFTGLCFLNLVDFDALYGHRRDPHGYGKAIMDMDSQLPELMAN
LNEDDLLILTADHGNDPTYVGTDHTREFVPMIAYSKSFKSGGSLPILNTFADLGSTISDNFKVKKTEHGDSFLSKLK
>Mature_397_residues
MRFKRVFLIVMDSLGVGASEDANQYFNEGVDDTKANTFGHIAESMDLRIPNLEKLGVGNIIPIKGTKSVELSSSYVTKIR
EKSLGKDTMTGHWEIMGLYVTTPFQTFTDTGFPKELLDELEERTGRKIIGNIAASGTEILKDLGEEHMRTGDLIVYTSAD
SVLQIAMHEEIIPIEEQYRISAIARDITMRPDWKVGRVITRPFLGTNKDNFKRTSNRKDYALKPSEETTLNFLSDANYDV
IALGKINDIFDGYGINKYSKTVSNDDGMKQITEWAKKDFTGLCFLNLVDFDALYGHRRDPHGYGKAIMDMDSQLPELMAN
LNEDDLLILTADHGNDPTYVGTDHTREFVPMIAYSKSFKSGGSLPILNTFADLGSTISDNFKVKKTEHGDSFLSKLK

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:
GO:0000287: Phosphopentomutase
GO:0003824: Phosphopentomutase
GO:0005737: Phosphopentomutase
GO:0008152: Phosphopentomutase
GO:0008973: Phosphopentomutase
GO:0009117: Phosphopentomutase
GO:0016853: Phosphopentomutase
GO:0043094: Phosphopentomutase
GO:0046872: Phosphopentomutase

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=413, Percent_Identity=42.6150121065375, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1789781, Length=421, Percent_Identity=26.8408551068884, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_ACHLI (A9NG16)

Other databases:

- EMBL:   CP000896
- RefSeq:   YP_001620672.1
- ProteinModelPortal:   A9NG16
- SMR:   A9NG16
- GeneID:   5803244
- GenomeReviews:   CP000896_GR
- KEGG:   acl:ACL_0680
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- BioCyc:   ALAI441768:ACL_0680-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 44506; Mature: 44506

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKRVFLIVMDSLGVGASEDANQYFNEGVDDTKANTFGHIAESMDLRIPNLEKLGVGNI
CCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCE
IPIKGTKSVELSSSYVTKIREKSLGKDTMTGHWEIMGLYVTTPFQTFTDTGFPKELLDEL
EECCCCCCEECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHCCCCCCHHHHHHH
EERTGRKIIGNIAASGTEILKDLGEEHMRTGDLIVYTSADSVLQIAMHEEIIPIEEQYRI
HHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHH
SAIARDITMRPDWKVGRVITRPFLGTNKDNFKRTSNRKDYALKPSEETTLNFLSDANYDV
HHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCEECCCCCHHHHHHCCCCCCE
IALGKINDIFDGYGINKYSKTVSNDDGMKQITEWAKKDFTGLCFLNLVDFDALYGHRRDP
EEECCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCC
HGYGKAIMDMDSQLPELMANLNEDDLLILTADHGNDPTYVGTDHTREFVPMIAYSKSFKS
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHCC
GGSLPILNTFADLGSTISDNFKVKKTEHGDSFLSKLK
CCCCCHHHHHHHHCCHHCCCEEEEECCCCHHHHHHCC
>Mature Secondary Structure
MRFKRVFLIVMDSLGVGASEDANQYFNEGVDDTKANTFGHIAESMDLRIPNLEKLGVGNI
CCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCE
IPIKGTKSVELSSSYVTKIREKSLGKDTMTGHWEIMGLYVTTPFQTFTDTGFPKELLDEL
EECCCCCCEECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHCCCCCCHHHHHHH
EERTGRKIIGNIAASGTEILKDLGEEHMRTGDLIVYTSADSVLQIAMHEEIIPIEEQYRI
HHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHH
SAIARDITMRPDWKVGRVITRPFLGTNKDNFKRTSNRKDYALKPSEETTLNFLSDANYDV
HHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCEECCCCCHHHHHHCCCCCCE
IALGKINDIFDGYGINKYSKTVSNDDGMKQITEWAKKDFTGLCFLNLVDFDALYGHRRDP
EEECCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCC
HGYGKAIMDMDSQLPELMANLNEDDLLILTADHGNDPTYVGTDHTREFVPMIAYSKSFKS
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHCC
GGSLPILNTFADLGSTISDNFKVKKTEHGDSFLSKLK
CCCCCHHHHHHHHCCHHCCCEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA