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The map label for this gene is ydaM [C]

Identifier: 162447533

GI number: 162447533

Start: 706142

End: 708145

Strand: Direct

Name: ydaM [C]

Synonym: ACL_0673

Alternate gene names: 162447533

Gene position: 706142-708145 (Clockwise)

Preceding gene: 162447531

Following gene: 162447536

Centisome position: 47.17

GC content: 32.53

Gene sequence:

>2004_bases
ATGGATATAAGTGCGTTAATAGATATGATCGTATCTATATCAAATAACATTTTGATTTTACTATCCATAGTCTTTTTATA
CACGCTTTCTAACTATGAACTTTATAAGCATAAACGCATTAAACAAGTAGTAACCGGTATTGTTGTCGGATTTTTGACTT
TATTTTTAATGACCAATCCAATGGTATTTGAAGAAGGTATTGTTTTTGATACAAGAACCATACTTATACCAATATCCGGT
GTATTCTTTGGGCCGATTACTACAATCATAGCGAGTATCATTGCCATTGCTTACAGAGTTAATTTAGGTGGAGTTGGTAT
GATGGTGGGTATATCAACAATCGTCATTAGTGCAGTGATTGGTATTTTGTGGCGTTATATATTCAGACGTCATAAATTTA
AAAACAAATATTTAGAGTATTATATTTTAGGCTTTACATCGAATGCTCTTGTATTTCTGCTCATGTTCTTTTTACCAGAC
AGTTTAAATGTCATTAGACAAGTATTTCCGATTTATCTTATCCTCTTTCCGGTTGTTACGATGTTAACTGGTGTAGTCAT
TAAACAGCAACAGTTTAGAATACAAGCAAGCAACCTTGAAAAAGCTCAAATGCTATTACTTCAAAGTTCTATAGATGCTT
CACACAACGTGGAAATATATGTAGTGGATAGTGCCTACAATTATCTGACCTTTAATATTTTTCATAAGAATCAAATAAAA
GCATATTTTAATGTAGAAATTGATGTAGGGTTTAATGTACTATCCTTATTAAAGGATGATAATAGAAGAACACGTATTAA
AACATCAATTGATAGTGCTTTAAAGGGTGAAATAATTCATGATGTCATATATACTACATTACCTGGTAATAAAATTATAG
AGGAACGTTTTACACCACTTCGACGTGGACATGATATTTTAGGGGTAACAGTTTTCATCAGAGATATTACTGAACAACGT
CTACATGAAGACTCTATTATGAGATTAAGTTATTATGATGGCCTTACAGGGTTACCAAATAGAAGATATTTTCAAGAAAA
ATTAGTAGAAGTTAATGATAATCAATACTGTCCTGTATCAATCATTACATGTGATATCAATGGCTTGAAACTCTTTAATG
ACGCATTGGGACATAAAATGGGAGATTTGGTACTTGTTAAAGTAGCAGAAATTCTTACCAGACACTTATTACCAAATGGT
ACAGTTAGCCGTATAGGTGGCGATGAATTTATATTTATTCTACCAAACACGGATTATGATACAGCCCTTAAGATGATGGA
AAAAGTCGATAATGAATTTGATAAACATCTATTTAATGGTTTAAAACTCTCAGTTTCTTATGGGATTGCGACTAAATTAG
AAGGTGATCATATCGATGATGTTCTAAAACAAAGTGAAGTACAAATGCATAAGAGTAAACTCTTTGAAAAAGCATCTCAC
CGCAGTGAATTTATTAAATCTATCTTAAATACCTTGAGAGAAAAAAATCCTCGAGAAAAGGATCATTCTACTAGGGTAGC
TACCATCTGTACAGAAATTGGTAAATTCCTAGGTATGAAAAAACATGATCTAAATTTACTCGAGGCGATCGCATCACTTC
ATGATATTGGAAAGATTGCTATTGATGAAGCCATCTTGAATAAACCAGGCAAACTAACACCTAAAGAATGGGAAGCAATT
AAAAAGCACCCTGAAATTGGTTATAGAATTATTTCTACTGCCCCTGAATATGCAGAAATTGCAGAGGATATATTATCCCA
CCATGAACATTTTAATGGTCAAGGCTATCCAAGAGGGTTAAGCGGTGAAGATATTCCTATTAGAGCTAGAATAGTTTCGA
TTGCTGATGCTTATGATGCTATGGTATCTAGGCGAACTTATAAAGAGCCTATGACACACGAACAAGCAATTTTAGAAATT
AAACGCTGTTCAGGTACTCAGTTTGATCCTAATTTAGTGAATATATTTGTTGATTTAATTGAGAATGGCGTATTATACCT
ATAA

Upstream 100 bases:

>100_bases
ATTCACTATTTTACAGTAAAAATTAGTAGGGTGATATTATAGTAACGCGGTTTAAAATTTGTTATAATTGACTTGTAATA
GAAAAATAAAAGGAGTTTTT

Downstream 100 bases:

>100_bases
TTAAAAAGGGTACACATGGATAGTAAATATCTTAATCTGTACCCTTTTTATGTTTGTAACCTCGTAGTTAACGTTTAAAC
CAATAGCCTATAGATCTTCC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MDISALIDMIVSISNNILILLSIVFLYTLSNYELYKHKRIKQVVTGIVVGFLTLFLMTNPMVFEEGIVFDTRTILIPISG
VFFGPITTIIASIIAIAYRVNLGGVGMMVGISTIVISAVIGILWRYIFRRHKFKNKYLEYYILGFTSNALVFLLMFFLPD
SLNVIRQVFPIYLILFPVVTMLTGVVIKQQQFRIQASNLEKAQMLLLQSSIDASHNVEIYVVDSAYNYLTFNIFHKNQIK
AYFNVEIDVGFNVLSLLKDDNRRTRIKTSIDSALKGEIIHDVIYTTLPGNKIIEERFTPLRRGHDILGVTVFIRDITEQR
LHEDSIMRLSYYDGLTGLPNRRYFQEKLVEVNDNQYCPVSIITCDINGLKLFNDALGHKMGDLVLVKVAEILTRHLLPNG
TVSRIGGDEFIFILPNTDYDTALKMMEKVDNEFDKHLFNGLKLSVSYGIATKLEGDHIDDVLKQSEVQMHKSKLFEKASH
RSEFIKSILNTLREKNPREKDHSTRVATICTEIGKFLGMKKHDLNLLEAIASLHDIGKIAIDEAILNKPGKLTPKEWEAI
KKHPEIGYRIISTAPEYAEIAEDILSHHEHFNGQGYPRGLSGEDIPIRARIVSIADAYDAMVSRRTYKEPMTHEQAILEI
KRCSGTQFDPNLVNIFVDLIENGVLYL

Sequences:

>Translated_667_residues
MDISALIDMIVSISNNILILLSIVFLYTLSNYELYKHKRIKQVVTGIVVGFLTLFLMTNPMVFEEGIVFDTRTILIPISG
VFFGPITTIIASIIAIAYRVNLGGVGMMVGISTIVISAVIGILWRYIFRRHKFKNKYLEYYILGFTSNALVFLLMFFLPD
SLNVIRQVFPIYLILFPVVTMLTGVVIKQQQFRIQASNLEKAQMLLLQSSIDASHNVEIYVVDSAYNYLTFNIFHKNQIK
AYFNVEIDVGFNVLSLLKDDNRRTRIKTSIDSALKGEIIHDVIYTTLPGNKIIEERFTPLRRGHDILGVTVFIRDITEQR
LHEDSIMRLSYYDGLTGLPNRRYFQEKLVEVNDNQYCPVSIITCDINGLKLFNDALGHKMGDLVLVKVAEILTRHLLPNG
TVSRIGGDEFIFILPNTDYDTALKMMEKVDNEFDKHLFNGLKLSVSYGIATKLEGDHIDDVLKQSEVQMHKSKLFEKASH
RSEFIKSILNTLREKNPREKDHSTRVATICTEIGKFLGMKKHDLNLLEAIASLHDIGKIAIDEAILNKPGKLTPKEWEAI
KKHPEIGYRIISTAPEYAEIAEDILSHHEHFNGQGYPRGLSGEDIPIRARIVSIADAYDAMVSRRTYKEPMTHEQAILEI
KRCSGTQFDPNLVNIFVDLIENGVLYL
>Mature_667_residues
MDISALIDMIVSISNNILILLSIVFLYTLSNYELYKHKRIKQVVTGIVVGFLTLFLMTNPMVFEEGIVFDTRTILIPISG
VFFGPITTIIASIIAIAYRVNLGGVGMMVGISTIVISAVIGILWRYIFRRHKFKNKYLEYYILGFTSNALVFLLMFFLPD
SLNVIRQVFPIYLILFPVVTMLTGVVIKQQQFRIQASNLEKAQMLLLQSSIDASHNVEIYVVDSAYNYLTFNIFHKNQIK
AYFNVEIDVGFNVLSLLKDDNRRTRIKTSIDSALKGEIIHDVIYTTLPGNKIIEERFTPLRRGHDILGVTVFIRDITEQR
LHEDSIMRLSYYDGLTGLPNRRYFQEKLVEVNDNQYCPVSIITCDINGLKLFNDALGHKMGDLVLVKVAEILTRHLLPNG
TVSRIGGDEFIFILPNTDYDTALKMMEKVDNEFDKHLFNGLKLSVSYGIATKLEGDHIDDVLKQSEVQMHKSKLFEKASH
RSEFIKSILNTLREKNPREKDHSTRVATICTEIGKFLGMKKHDLNLLEAIASLHDIGKIAIDEAILNKPGKLTPKEWEAI
KKHPEIGYRIISTAPEYAEIAEDILSHHEHFNGQGYPRGLSGEDIPIRARIVSIADAYDAMVSRRTYKEPMTHEQAILEI
KRCSGTQFDPNLVNIFVDLIENGVLYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI87081881, Length=168, Percent_Identity=32.1428571428571, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788381, Length=205, Percent_Identity=25.8536585365854, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081974, Length=161, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87082007, Length=144, Percent_Identity=28.4722222222222, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786584, Length=171, Percent_Identity=28.6549707602339, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787541, Length=165, Percent_Identity=29.6969696969697, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI145693134, Length=134, Percent_Identity=29.8507462686567, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787816, Length=161, Percent_Identity=29.1925465838509, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787262, Length=108, Percent_Identity=30.5555555555556, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081977, Length=175, Percent_Identity=29.7142857142857, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75929; Mature: 75929

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISALIDMIVSISNNILILLSIVFLYTLSNYELYKHKRIKQVVTGIVVGFLTLFLMTNP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MVFEEGIVFDTRTILIPISGVFFGPITTIIASIIAIAYRVNLGGVGMMVGISTIVISAVI
CEEECCEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GILWRYIFRRHKFKNKYLEYYILGFTSNALVFLLMFFLPDSLNVIRQVFPIYLILFPVVT
HHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MLTGVVIKQQQFRIQASNLEKAQMLLLQSSIDASHNVEIYVVDSAYNYLTFNIFHKNQIK
HHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCEE
AYFNVEIDVGFNVLSLLKDDNRRTRIKTSIDSALKGEIIHDVIYTTLPGNKIIEERFTPL
EEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHH
RRGHDILGVTVFIRDITEQRLHEDSIMRLSYYDGLTGLPNRRYFQEKLVEVNDNQYCPVS
HCCCCHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEE
IITCDINGLKLFNDALGHKMGDLVLVKVAEILTRHLLPNGTVSRIGGDEFIFILPNTDYD
EEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCHH
TALKMMEKVDNEFDKHLFNGLKLSVSYGIATKLEGDHIDDVLKQSEVQMHKSKLFEKASH
HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RSEFIKSILNTLREKNPREKDHSTRVATICTEIGKFLGMKKHDLNLLEAIASLHDIGKIA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IDEAILNKPGKLTPKEWEAIKKHPEIGYRIISTAPEYAEIAEDILSHHEHFNGQGYPRGL
HHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCC
SGEDIPIRARIVSIADAYDAMVSRRTYKEPMTHEQAILEIKRCSGTQFDPNLVNIFVDLI
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ENGVLYL
HCCCCCC
>Mature Secondary Structure
MDISALIDMIVSISNNILILLSIVFLYTLSNYELYKHKRIKQVVTGIVVGFLTLFLMTNP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MVFEEGIVFDTRTILIPISGVFFGPITTIIASIIAIAYRVNLGGVGMMVGISTIVISAVI
CEEECCEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GILWRYIFRRHKFKNKYLEYYILGFTSNALVFLLMFFLPDSLNVIRQVFPIYLILFPVVT
HHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MLTGVVIKQQQFRIQASNLEKAQMLLLQSSIDASHNVEIYVVDSAYNYLTFNIFHKNQIK
HHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCEE
AYFNVEIDVGFNVLSLLKDDNRRTRIKTSIDSALKGEIIHDVIYTTLPGNKIIEERFTPL
EEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHH
RRGHDILGVTVFIRDITEQRLHEDSIMRLSYYDGLTGLPNRRYFQEKLVEVNDNQYCPVS
HCCCCHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEE
IITCDINGLKLFNDALGHKMGDLVLVKVAEILTRHLLPNGTVSRIGGDEFIFILPNTDYD
EEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCHH
TALKMMEKVDNEFDKHLFNGLKLSVSYGIATKLEGDHIDDVLKQSEVQMHKSKLFEKASH
HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RSEFIKSILNTLREKNPREKDHSTRVATICTEIGKFLGMKKHDLNLLEAIASLHDIGKIA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IDEAILNKPGKLTPKEWEAIKKHPEIGYRIISTAPEYAEIAEDILSHHEHFNGQGYPRGL
HHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCC
SGEDIPIRARIVSIADAYDAMVSRRTYKEPMTHEQAILEIKRCSGTQFDPNLVNIFVDLI
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ENGVLYL
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]