| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is focB [C]
Identifier: 162447512
GI number: 162447512
Start: 678970
End: 679611
Strand: Direct
Name: focB [C]
Synonym: ACL_0652
Alternate gene names: 162447512
Gene position: 678970-679611 (Clockwise)
Preceding gene: 162447511
Following gene: 162447513
Centisome position: 45.36
GC content: 31.31
Gene sequence:
>642_bases ATGGAAAAACACATAAAAACACTATTAAGTGCCATGATGGCTGGTGCACTCATTGCCATAGCAGGTACAACTTATTTATA TTTAAAAGCAGACCATACAATCATCGGTGCATTCTTATTTGCATTTGGATTACTCTGTGTCGTTACACTAGATTACAAGT TATATACAGGTCGTATTGGTTATATTATCGATAAGGAAAAATCTTATATCATCGAGATATTATGGATTATACTTGGTAAT CTATTAGGTTCAATCTTAATAGCAAGTATTATTTACTTAGCTAATTATGAAGTCATTATTCAAACAGCTAAAACACTCGT TGAAACTAAGTTATCTAGAAATATATTGGAGATATTTGGTCTATCTATAATGTGCGGTATGATGATGTACTTAGGTGTTG ATGGTTATAAGCGCATCGAAAATCACGTTGCTAAAGTCGTAGTTAACATCTTTGCAGTAGCAATATTTGTGATTTTAGGA TTTGAACACTCAATCGCAAACATTTATTACTTTTTACTAGCTAATGAATATAGTTGGTATATGCTCTTTGCATTTGTAGT GATGCTTATAGGTAATGGTGTTGGTGCAGTTATTTTAAATAGTATAGAAAAATTTGGATCACTAAAGAAGCCTAATCAAT AG
Upstream 100 bases:
>100_bases ATCTAATTTAAGTAAAAAATACACAATTTAAATTCTAATTATAGGTTTACTTGTAATAATATTTACTTTTCGTATAATTG TATTGAAGAGGAAGTATACA
Downstream 100 bases:
>100_bases ATTAAGCTTCTTTTTTTGGTAAAATATCACTATAGAAGGTGATATGATGAAAAATGGTGTTGTAGTAATTACAGGTGCTA GCTCTGGTATAGGGAAAAGC
Product: integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MEKHIKTLLSAMMAGALIAIAGTTYLYLKADHTIIGAFLFAFGLLCVVTLDYKLYTGRIGYIIDKEKSYIIEILWIILGN LLGSILIASIIYLANYEVIIQTAKTLVETKLSRNILEIFGLSIMCGMMMYLGVDGYKRIENHVAKVVVNIFAVAIFVILG FEHSIANIYYFLLANEYSWYMLFAFVVMLIGNGVGAVILNSIEKFGSLKKPNQ
Sequences:
>Translated_213_residues MEKHIKTLLSAMMAGALIAIAGTTYLYLKADHTIIGAFLFAFGLLCVVTLDYKLYTGRIGYIIDKEKSYIIEILWIILGN LLGSILIASIIYLANYEVIIQTAKTLVETKLSRNILEIFGLSIMCGMMMYLGVDGYKRIENHVAKVVVNIFAVAIFVILG FEHSIANIYYFLLANEYSWYMLFAFVVMLIGNGVGAVILNSIEKFGSLKKPNQ >Mature_213_residues MEKHIKTLLSAMMAGALIAIAGTTYLYLKADHTIIGAFLFAFGLLCVVTLDYKLYTGRIGYIIDKEKSYIIEILWIILGN LLGSILIASIIYLANYEVIIQTAKTLVETKLSRNILEIFGLSIMCGMMMYLGVDGYKRIENHVAKVVVNIFAVAIFVILG FEHSIANIYYFLLANEYSWYMLFAFVVMLIGNGVGAVILNSIEKFGSLKKPNQ
Specific function: Involved In The Bidirectional Transport Of Formate (By Similarity). [C]
COG id: COG2116
COG function: function code P; Formate/nitrite family of transporters
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23804; Mature: 23804
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKHIKTLLSAMMAGALIAIAGTTYLYLKADHTIIGAFLFAFGLLCVVTLDYKLYTGRIG CCHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEECCEE YIIDKEKSYIIEILWIILGNLLGSILIASIIYLANYEVIIQTAKTLVETKLSRNILEIFG EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIMCGMMMYLGVDGYKRIENHVAKVVVNIFAVAIFVILGFEHSIANIYYFLLANEYSWY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH MLFAFVVMLIGNGVGAVILNSIEKFGSLKKPNQ HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEKHIKTLLSAMMAGALIAIAGTTYLYLKADHTIIGAFLFAFGLLCVVTLDYKLYTGRIG CCHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEECCEE YIIDKEKSYIIEILWIILGNLLGSILIASIIYLANYEVIIQTAKTLVETKLSRNILEIFG EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIMCGMMMYLGVDGYKRIENHVAKVVVNIFAVAIFVILGFEHSIANIYYFLLANEYSWY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH MLFAFVVMLIGNGVGAVILNSIEKFGSLKKPNQ HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA