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The map label for this gene is ftsY [H]

Identifier: 162447213

GI number: 162447213

Start: 362961

End: 363917

Strand: Direct

Name: ftsY [H]

Synonym: ACL_0347

Alternate gene names: 162447213

Gene position: 362961-363917 (Clockwise)

Preceding gene: 162447212

Following gene: 162447214

Centisome position: 24.25

GC content: 30.62

Gene sequence:

>957_bases
ATGGGTTTTTTCTCACGTCTGTTTAAAAAGAAACCAAAAAATGATAAATATCAAATGGGTCTACATAAAAGTAGAAGTTC
ATTTGATAACTTAAAGAAATTATTAGATGAGTCTGATACGATTAATGATGATTTATTTGATGCTATAGAAGATTTACTTA
TCTCTGCCGATATTGGTGTAGATACTGTTTTACATTTTACAAATGAACTTCGAAATGAAGTTATAAATAAACAATTTGAA
AATCCAAGTGACTTAAGTGAAACGATTGTTGATAAATTATTTGAAATATATTTAAAAGATGAATTTGTAGATACAACATT
AAGTTTTACAGAAGGCGAAGTCAATGTCTTTTTATTTGTAGGAGTTAATGGTGTTGGTAAAACAACTACTATTGGTAAAC
TTGCAAAACAATATAAAGACCAAGGTAAAAAAGTCTTAATGGTTGCAGGTGATACCTTTAGAGCTGGTGCAATTGAACAA
CTTTATGAGTGGAGTAAGCGTGCCAAGGTAGATTTTTACCAAAAAGATGCTGGATCTGACCCTTCAAGTGTCATATTTGA
AGCACTAGAAAAAGCTAAAAAAGAAACATATGACCTTGTATTAGTCGATACTGCTGGTAGACTTCAAAATAAAGTGAACT
TAATGAATGAGTTATCAAAAATGAAACGTGTCATTGAAAAAGCTCTACCAAGTCAACCTGCTGAAACATTACTGGTTATT
GATGCAACTACTGGTCAAAATGGTATGAATCAAGCAAAAGTGTTTAATGAAGCAACAGATCTAACTGGGATTGTTTTAAC
CAAGTTAGATGGTACTGCAAAAGGTGGTATTGTACTTGCGATTAGACACTTATATAACCTACCAATTAAATATGTAGGCC
TTGGTGAAAAAATTGATGATTTAGTACCATTTGATATAGAAGATTATATTTATAACCTATTTAAAGGATTCTTCTAA

Upstream 100 bases:

>100_bases
AAAACAAGGGCAAGAAGATAACCATAATCTGTCAAAGAGCCTTTATAAAAATATGTAATTATGATAAAATACTATAGATA
AATAAAGGAAGTGACCAAGG

Downstream 100 bases:

>100_bases
TGGAAAACTTAGAAAAAACAGAATATTTAAATACACTTTATAGTTTTTATAGTGAACTATTAACGGATAAACAACAAGCT
TACTATACAAACTATTACCA

Product: signal recognition particle GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGFFSRLFKKKPKNDKYQMGLHKSRSSFDNLKKLLDESDTINDDLFDAIEDLLISADIGVDTVLHFTNELRNEVINKQFE
NPSDLSETIVDKLFEIYLKDEFVDTTLSFTEGEVNVFLFVGVNGVGKTTTIGKLAKQYKDQGKKVLMVAGDTFRAGAIEQ
LYEWSKRAKVDFYQKDAGSDPSSVIFEALEKAKKETYDLVLVDTAGRLQNKVNLMNELSKMKRVIEKALPSQPAETLLVI
DATTGQNGMNQAKVFNEATDLTGIVLTKLDGTAKGGIVLAIRHLYNLPIKYVGLGEKIDDLVPFDIEDYIYNLFKGFF

Sequences:

>Translated_318_residues
MGFFSRLFKKKPKNDKYQMGLHKSRSSFDNLKKLLDESDTINDDLFDAIEDLLISADIGVDTVLHFTNELRNEVINKQFE
NPSDLSETIVDKLFEIYLKDEFVDTTLSFTEGEVNVFLFVGVNGVGKTTTIGKLAKQYKDQGKKVLMVAGDTFRAGAIEQ
LYEWSKRAKVDFYQKDAGSDPSSVIFEALEKAKKETYDLVLVDTAGRLQNKVNLMNELSKMKRVIEKALPSQPAETLLVI
DATTGQNGMNQAKVFNEATDLTGIVLTKLDGTAKGGIVLAIRHLYNLPIKYVGLGEKIDDLVPFDIEDYIYNLFKGFF
>Mature_317_residues
GFFSRLFKKKPKNDKYQMGLHKSRSSFDNLKKLLDESDTINDDLFDAIEDLLISADIGVDTVLHFTNELRNEVINKQFEN
PSDLSETIVDKLFEIYLKDEFVDTTLSFTEGEVNVFLFVGVNGVGKTTTIGKLAKQYKDQGKKVLMVAGDTFRAGAIEQL
YEWSKRAKVDFYQKDAGSDPSSVIFEALEKAKKETYDLVLVDTAGRLQNKVNLMNELSKMKRVIEKALPSQPAETLLVID
ATTGQNGMNQAKVFNEATDLTGIVLTKLDGTAKGGIVLAIRHLYNLPIKYVGLGEKIDDLVPFDIEDYIYNLFKGFF

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:
GO:0000166: Signal recognition particle GTPase
GO:0005525: Signal recognition particle GTPase
GO:0006614: Signal recognition particle GTPase
GO:0017111: Signal recognition particle GTPase

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=287, Percent_Identity=32.404181184669, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI226371618, Length=205, Percent_Identity=39.0243902439024, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI295424842, Length=341, Percent_Identity=29.3255131964809, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI23308697, Length=341, Percent_Identity=29.3255131964809, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=36.2962962962963, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI1789874, Length=313, Percent_Identity=45.3674121405751, Blast_Score=248, Evalue=5e-67,
Organism=Escherichia coli, GI1788963, Length=271, Percent_Identity=38.0073800738007, Blast_Score=180, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17539958, Length=287, Percent_Identity=31.7073170731707, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI193206261, Length=323, Percent_Identity=29.4117647058824, Blast_Score=117, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=290, Percent_Identity=33.1034482758621, Blast_Score=166, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6320498, Length=334, Percent_Identity=27.8443113772455, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=287, Percent_Identity=30.6620209059233, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24641198, Length=307, Percent_Identity=29.6416938110749, Blast_Score=111, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35758; Mature: 35627

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFSRLFKKKPKNDKYQMGLHKSRSSFDNLKKLLDESDTINDDLFDAIEDLLISADIGV
CCHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
DTVLHFTNELRNEVINKQFENPSDLSETIVDKLFEIYLKDEFVDTTLSFTEGEVNVFLFV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEE
GVNGVGKTTTIGKLAKQYKDQGKKVLMVAGDTFRAGAIEQLYEWSKRAKVDFYQKDAGSD
ECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCC
PSSVIFEALEKAKKETYDLVLVDTAGRLQNKVNLMNELSKMKRVIEKALPSQPAETLLVI
HHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
DATTGQNGMNQAKVFNEATDLTGIVLTKLDGTAKGGIVLAIRHLYNLPIKYVGLGEKIDD
EECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHH
LVPFDIEDYIYNLFKGFF
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GFFSRLFKKKPKNDKYQMGLHKSRSSFDNLKKLLDESDTINDDLFDAIEDLLISADIGV
CHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
DTVLHFTNELRNEVINKQFENPSDLSETIVDKLFEIYLKDEFVDTTLSFTEGEVNVFLFV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEE
GVNGVGKTTTIGKLAKQYKDQGKKVLMVAGDTFRAGAIEQLYEWSKRAKVDFYQKDAGSD
ECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCC
PSSVIFEALEKAKKETYDLVLVDTAGRLQNKVNLMNELSKMKRVIEKALPSQPAETLLVI
HHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
DATTGQNGMNQAKVFNEATDLTGIVLTKLDGTAKGGIVLAIRHLYNLPIKYVGLGEKIDD
EECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHH
LVPFDIEDYIYNLFKGFF
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]