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The map label for this gene is yrrO [H]

Identifier: 162447211

GI number: 162447211

Start: 361103

End: 362284

Strand: Direct

Name: yrrO [H]

Synonym: ACL_0345

Alternate gene names: 162447211

Gene position: 361103-362284 (Clockwise)

Preceding gene: 162447210

Following gene: 162447212

Centisome position: 24.12

GC content: 33.93

Gene sequence:

>1182_bases
ATGACTGAACTACTCGCTCCAGCTGGAGATTTAGATAAACTAAAGATTGCTATTATATATGGCGCAGATGCTGTATTTAT
TGGAGGTAAACAATTTAGTTTACGTGCCAATGCATCAAACTTTACAAAAGAAGATCTAATTGAAGGTTGTAAGTTCGCAC
ATGATCGTGGCAAAAAAGTGTATGTTACAACAAACGTGATACCACATCAAAAAGATAAAGAAGGCTTAATTGAATATTTA
AAAATATTAGAAGAAGCTAAAGTAGATGCAATTATTGCAGCAAGTCCTTTAATTATTAATACCGCTTTAAAACATACAAA
CCTAGAAGTGCATATTTCTACTCAACAATCAGCATTAAACGTCCCAACAGTAAACTATTGGTACAATAAAGGTGCTACAA
GGGTTGTTTTAGGACGTGATATTGATTTAAACGACATTGAACACATTACTAAACATGTAGACGCTGAAATCGAAGTATTT
ATCCATGGTGGTATGTGTGCAGGTTACAGTGGACGCTGTTCACTTTCTAACCACTTAACCAATAGAGATGCAAACCGTGG
TGGATGTGCACACACATGCCGCTGGTTCTTTGAACTACAAAAGAATGGAGAAATAGAAGCAGATATTCCATTTAGCATGG
GTTCAAAAGATTTAAGTGCGGTTAAAGAAATTACTAGACTTATGGATATTGGTGTTTCATCATTAAAAATTGAAGGCCGC
ATGAAATCACTACATTATATTGCAACAGTAGTAAATACGTATCGTCGTATTATTGATGAATATACTGAAACTGGTGCAAT
CAAAAACTATGAACTTTATGAAGAAATGCTGAAAAATGCTGAAAATAGAGAAACATCTCATGGTTTCTTTTATGGACTAC
CTACTAAAGATCAACAACTTTATGAAAAACGTAGTGAACGTGTGATGCAAAACTTTGTTGGGTTAATTCTTGACTATAAC
GAAGAAACTAAATATGCAACTGTTGAAACCAAAAACGTCTTTGTCTTAGAAGACTTAGAAGTATTTTCTCCTAAACACGC
ATCAAAGACCTTCTTAAATACTTCAATGATGAACTCCAATCAAGAAGTGATTACAAGAGCAGCACGTGCAAGAGAAAAAA
TACAAGTCTATATTCCGTTTAAAGTTGAACCATTTGATATGTTAAGAGCTAAAAGAACCTAA

Upstream 100 bases:

>100_bases
TATAAAAATAACGACTTTGACTTACAACTTATCACCGATTATAAACAAACACTACATGATGGATTCTTATTTGATGAGTC
TACAATTAAGGGAGAGAAAA

Downstream 100 bases:

>100_bases
AACAAGTCAGGGCGAAAATGACTAAAATATTTACCTTCTATCCTATAATAGACTTATAAGGATAGGAGGTATTTTTATGA
AAACAATGAAAAACAAACCC

Product: peptidase U32 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MTELLAPAGDLDKLKIAIIYGADAVFIGGKQFSLRANASNFTKEDLIEGCKFAHDRGKKVYVTTNVIPHQKDKEGLIEYL
KILEEAKVDAIIAASPLIINTALKHTNLEVHISTQQSALNVPTVNYWYNKGATRVVLGRDIDLNDIEHITKHVDAEIEVF
IHGGMCAGYSGRCSLSNHLTNRDANRGGCAHTCRWFFELQKNGEIEADIPFSMGSKDLSAVKEITRLMDIGVSSLKIEGR
MKSLHYIATVVNTYRRIIDEYTETGAIKNYELYEEMLKNAENRETSHGFFYGLPTKDQQLYEKRSERVMQNFVGLILDYN
EETKYATVETKNVFVLEDLEVFSPKHASKTFLNTSMMNSNQEVITRAARAREKIQVYIPFKVEPFDMLRAKRT

Sequences:

>Translated_393_residues
MTELLAPAGDLDKLKIAIIYGADAVFIGGKQFSLRANASNFTKEDLIEGCKFAHDRGKKVYVTTNVIPHQKDKEGLIEYL
KILEEAKVDAIIAASPLIINTALKHTNLEVHISTQQSALNVPTVNYWYNKGATRVVLGRDIDLNDIEHITKHVDAEIEVF
IHGGMCAGYSGRCSLSNHLTNRDANRGGCAHTCRWFFELQKNGEIEADIPFSMGSKDLSAVKEITRLMDIGVSSLKIEGR
MKSLHYIATVVNTYRRIIDEYTETGAIKNYELYEEMLKNAENRETSHGFFYGLPTKDQQLYEKRSERVMQNFVGLILDYN
EETKYATVETKNVFVLEDLEVFSPKHASKTFLNTSMMNSNQEVITRAARAREKIQVYIPFKVEPFDMLRAKRT
>Mature_392_residues
TELLAPAGDLDKLKIAIIYGADAVFIGGKQFSLRANASNFTKEDLIEGCKFAHDRGKKVYVTTNVIPHQKDKEGLIEYLK
ILEEAKVDAIIAASPLIINTALKHTNLEVHISTQQSALNVPTVNYWYNKGATRVVLGRDIDLNDIEHITKHVDAEIEVFI
HGGMCAGYSGRCSLSNHLTNRDANRGGCAHTCRWFFELQKNGEIEADIPFSMGSKDLSAVKEITRLMDIGVSSLKIEGRM
KSLHYIATVVNTYRRIIDEYTETGAIKNYELYEEMLKNAENRETSHGFFYGLPTKDQQLYEKRSERVMQNFVGLILDYNE
ETKYATVETKNVFVLEDLEVFSPKHASKTFLNTSMMNSNQEVITRAARAREKIQVYIPFKVEPFDMLRAKRT

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=436, Percent_Identity=33.9449541284404, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI87081910, Length=262, Percent_Identity=38.1679389312977, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1789548, Length=292, Percent_Identity=29.1095890410959, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 44563; Mature: 44432

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLAPAGDLDKLKIAIIYGADAVFIGGKQFSLRANASNFTKEDLIEGCKFAHDRGKKV
CCCCCCCCCCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEE
YVTTNVIPHQKDKEGLIEYLKILEEAKVDAIIAASPLIINTALKHTNLEVHISTQQSALN
EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEHHHHHCCEEEEEECCCCCCC
VPTVNYWYNKGATRVVLGRDIDLNDIEHITKHVDAEIEVFIHGGMCAGYSGRCSLSNHLT
CCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCHHHHCC
NRDANRGGCAHTCRWFFELQKNGEIEADIPFSMGSKDLSAVKEITRLMDIGVSSLKIEGR
CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCH
MKSLHYIATVVNTYRRIIDEYTETGAIKNYELYEEMLKNAENRETSHGFFYGLPTKDQQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
YEKRSERVMQNFVGLILDYNEETKYATVETKNVFVLEDLEVFSPKHASKTFLNTSMMNSN
HHHHHHHHHHHHHHEEEECCCCCCEEEEEECCEEEEECHHHCCCCCCHHHHHHHHHCCCC
QEVITRAARAREKIQVYIPFKVEPFDMLRAKRT
HHHHHHHHHCCCEEEEEEEEEECHHHHHHCCCC
>Mature Secondary Structure 
TELLAPAGDLDKLKIAIIYGADAVFIGGKQFSLRANASNFTKEDLIEGCKFAHDRGKKV
CCCCCCCCCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEE
YVTTNVIPHQKDKEGLIEYLKILEEAKVDAIIAASPLIINTALKHTNLEVHISTQQSALN
EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEHHHHHCCEEEEEECCCCCCC
VPTVNYWYNKGATRVVLGRDIDLNDIEHITKHVDAEIEVFIHGGMCAGYSGRCSLSNHLT
CCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCHHHHCC
NRDANRGGCAHTCRWFFELQKNGEIEADIPFSMGSKDLSAVKEITRLMDIGVSSLKIEGR
CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCH
MKSLHYIATVVNTYRRIIDEYTETGAIKNYELYEEMLKNAENRETSHGFFYGLPTKDQQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
YEKRSERVMQNFVGLILDYNEETKYATVETKNVFVLEDLEVFSPKHASKTFLNTSMMNSN
HHHHHHHHHHHHHHEEEECCCCCCEEEEEECCEEEEECHHHCCCCCCHHHHHHHHHCCCC
QEVITRAARAREKIQVYIPFKVEPFDMLRAKRT
HHHHHHHHHCCCEEEEEEEEEECHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]