Click here to switch to the map view.

The map label for this gene is ykrA [H]

Identifier: 162447176

GI number: 162447176

Start: 320666

End: 321445

Strand: Direct

Name: ykrA [H]

Synonym: ACL_0310

Alternate gene names: 162447176

Gene position: 320666-321445 (Clockwise)

Preceding gene: 162447174

Following gene: 162447177

Centisome position: 21.42

GC content: 31.79

Gene sequence:

>780_bases
ATGAAGAAATTATTTGTATTTGATTTAGATAATACACTACGATCAACCAATTTAAGAAAAATCTTACCAAATACTAAAAA
GCTGATTCAAGAAATATCTGCAAATCCGGATTATGTGCTTGCACTTGCAACCGGTAGAGGATTAGCAAAATTAGATGTCC
TAGAAGATATGGACTCATTTTTTAAATATAAAATCTTAGTCAATGGTGCCATTACCTTAGAAGATAATCTCATCTTAAAT
GAAAATCATATTAAAAAAGAAGTTGTTGAAGATATCATAAATGCAGCTAATCAAAGAAATATTGCAGTAGGCTTAGTTGG
CATGAAGGATGAGGTCGTCACTTTTATAGATAAAGAAGTAGAAAAAGCATTTGATAATTTTGTCGACAAAAAACCAAAAG
CACAACCCACATTTTATCTAGAACAACATGTATATCAAATGTGGGTCTTTCATAAAGATGAAAAGATGCTTGAAAAAGAA
ATTAGGCAACACCAAGATTTAGAAATATATCATTGGCATGATGGTGGTTTTGATATTGTACCTAAAGGGATATCTAAAGC
ATCAGCACTTAAAGAACTGATGAAGAAATATCCGGATTATCAAGTGATTGCTGTAGGCGATGGACATAATGATCTAGATA
TGATACGATTAGCTGATGTCGGTATCATCATGAAAATTTCACGTGGGATTAAAGATGCACAAGGAAGTTTTCAATATGTA
GCACCTCATGTAGATCATGATGCGCTCTATGATTTTTTAAAAACACAACACATCATATAA

Upstream 100 bases:

>100_bases
CGTAACGTAAAATTATGTTAATTACATTATACACTATAATTTCAAAATTATAAAACTTTTGTTTCATGATAAAATAGTTA
GTGTAAAGATTGAGGTACTT

Downstream 100 bases:

>100_bases
GGAGTTAACAAAATGTATAAGACATATGTATTAGAAAATGATTATTTAAAAGTAGAAGCAATTGATTATGCTGCAAGCAT
CTATCAAATATATCTAAAAG

Product: HAD superfamily protein, hydrolase 3-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKKLFVFDLDNTLRSTNLRKILPNTKKLIQEISANPDYVLALATGRGLAKLDVLEDMDSFFKYKILVNGAITLEDNLILN
ENHIKKEVVEDIINAANQRNIAVGLVGMKDEVVTFIDKEVEKAFDNFVDKKPKAQPTFYLEQHVYQMWVFHKDEKMLEKE
IRQHQDLEIYHWHDGGFDIVPKGISKASALKELMKKYPDYQVIAVGDGHNDLDMIRLADVGIIMKISRGIKDAQGSFQYV
APHVDHDALYDFLKTQHII

Sequences:

>Translated_259_residues
MKKLFVFDLDNTLRSTNLRKILPNTKKLIQEISANPDYVLALATGRGLAKLDVLEDMDSFFKYKILVNGAITLEDNLILN
ENHIKKEVVEDIINAANQRNIAVGLVGMKDEVVTFIDKEVEKAFDNFVDKKPKAQPTFYLEQHVYQMWVFHKDEKMLEKE
IRQHQDLEIYHWHDGGFDIVPKGISKASALKELMKKYPDYQVIAVGDGHNDLDMIRLADVGIIMKISRGIKDAQGSFQYV
APHVDHDALYDFLKTQHII
>Mature_259_residues
MKKLFVFDLDNTLRSTNLRKILPNTKKLIQEISANPDYVLALATGRGLAKLDVLEDMDSFFKYKILVNGAITLEDNLILN
ENHIKKEVVEDIINAANQRNIAVGLVGMKDEVVTFIDKEVEKAFDNFVDKKPKAQPTFYLEQHVYQMWVFHKDEKMLEKE
IRQHQDLEIYHWHDGGFDIVPKGISKASALKELMKKYPDYQVIAVGDGHNDLDMIRLADVGIIMKISRGIKDAQGSFQYV
APHVDHDALYDFLKTQHII

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29770; Mature: 29770

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFVFDLDNTLRSTNLRKILPNTKKLIQEISANPDYVLALATGRGLAKLDVLEDMDSF
CCEEEEEECCCHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
FKYKILVNGAITLEDNLILNENHIKKEVVEDIINAANQRNIAVGLVGMKDEVVTFIDKEV
HEEEEEEEEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
EKAFDNFVDKKPKAQPTFYLEQHVYQMWVFHKDEKMLEKEIRQHQDLEIYHWHDGGFDIV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCEEEEEECCCCEEC
PKGISKASALKELMKKYPDYQVIAVGDGHNDLDMIRLADVGIIMKISRGIKDAQGSFQYV
CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHEEEHHCCHHEEHHHCCCCCCCCCEEEE
APHVDHDALYDFLKTQHII
CCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLFVFDLDNTLRSTNLRKILPNTKKLIQEISANPDYVLALATGRGLAKLDVLEDMDSF
CCEEEEEECCCHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
FKYKILVNGAITLEDNLILNENHIKKEVVEDIINAANQRNIAVGLVGMKDEVVTFIDKEV
HEEEEEEEEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
EKAFDNFVDKKPKAQPTFYLEQHVYQMWVFHKDEKMLEKEIRQHQDLEIYHWHDGGFDIV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCEEEEEECCCCEEC
PKGISKASALKELMKKYPDYQVIAVGDGHNDLDMIRLADVGIIMKISRGIKDAQGSFQYV
CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHEEEHHCCHHEEHHHCCCCCCCCCEEEE
APHVDHDALYDFLKTQHII
CCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]