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The map label for this gene is rpoZ

Identifier: 162447171

GI number: 162447171

Start: 314611

End: 314826

Strand: Direct

Name: rpoZ

Synonym: ACL_0305

Alternate gene names: NA

Gene position: 314611-314826 (Clockwise)

Preceding gene: 162447170

Following gene: 162447172

Centisome position: 21.02

GC content: 30.56

Gene sequence:

>216_bases
ATGAAAAAAAGAAAACATGGTTTAAACTACCCAACAATTGACGTACTATTAGAAAAGATTGATTCTAAGTATAAATTAGT
ATATGCAGCGAGTAAAGTTGCTCATATCATTGAAAGAGAAAATTTGGATGTTAAAGATTCCAAATCAGTCACAAGTGTAG
GCAAAGCGTTAGAAGAAATTGCAAATGGTAAAGTAACTGTTACGTTCATTGACTAA

Upstream 100 bases:

>100_bases
GTAAATAATGCTGCAGATCGTATTATGGCGATCATTCGTGCAGAACATGCACGTACTCAAAGAACTATTCAAAAATATCA
ACAGTTAATGGAGGAATAAC

Downstream 100 bases:

>100_bases
TGAACATAACAGTTTTTTTATTAAAATATGTTAAAAGATTATAGAATGTTCATGATTTATCAATAAGTGTACACAATTTT
AGTATAATATAAACAAGGTG

Product: DNA-directed RNA polymerase subunit omega

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase Subunit Omega; DNA-Directed RNA Polymerase Omega Subunit

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MKKRKHGLNYPTIDVLLEKIDSKYKLVYAASKVAHIIERENLDVKDSKSVTSVGKALEEIANGKVTVTFID

Sequences:

>Translated_71_residues
MKKRKHGLNYPTIDVLLEKIDSKYKLVYAASKVAHIIERENLDVKDSKSVTSVGKALEEIANGKVTVTFID
>Mature_71_residues
MKKRKHGLNYPTIDVLLEKIDSKYKLVYAASKVAHIIERENLDVKDSKSVTSVGKALEEIANGKVTVTFID

Specific function: Unknown

COG id: COG1758

COG function: function code K; DNA-directed RNA polymerase, subunit K/omega

Gene ontology:
GO:0003677: DNA-directed RNA polymerase subunit omega
GO:0003899: DNA-directed RNA polymerase subunit omega
GO:0006351: DNA-directed RNA polymerase subunit omega
GO:0016740: DNA-directed RNA polymerase subunit omega
GO:0016779: DNA-directed RNA polymerase subunit omega
GO:0030880: DNA-directed RNA polymerase subunit omega

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7960; Mature: 7960

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRKHGLNYPTIDVLLEKIDSKYKLVYAASKVAHIIERENLDVKDSKSVTSVGKALEEI
CCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ANGKVTVTFID
CCCCEEEEEEC
>Mature Secondary Structure
MKKRKHGLNYPTIDVLLEKIDSKYKLVYAASKVAHIIERENLDVKDSKSVTSVGKALEEI
CCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ANGKVTVTFID
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA