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The map label for this gene is rpe [H]

Identifier: 162447123

GI number: 162447123

Start: 253469

End: 254101

Strand: Direct

Name: rpe [H]

Synonym: ACL_0253

Alternate gene names: 162447123

Gene position: 253469-254101 (Clockwise)

Preceding gene: 162447122

Following gene: 162447124

Centisome position: 16.93

GC content: 34.91

Gene sequence:

>633_bases
ATGAAAGTTGCACCGTCGATATTGACAGCAAATTTTATACGCTTGGAAGACGAGCTTAAATCCATCGAGGAAGGTTCGGA
TTATATTCATGTGGACGTTATGGATGGCCACTTTGTACCAAACATTAGTTTTGGACCAGCGATAGTTTCGCAAATTGGTG
AACTCACTAAACTACCAATGGATATTCATCTTATGGTAGAGCACCCATTAGATTGGATTGATAAAGTAATCTTTCCAACT
ACAGAATTTATTACAATCCATGCGGAATGTAACAGATTTAAAGAAAGTATTCGCAGAATTCTTTATTTAGGTAAAAAAGC
TGGTTTAGCAATTAAACCAAGCACAGATGTAGATTTTATTAAACCATACTTAAGTCAACTAGACCTTGTATTAGTCATGG
GTGTTGAACCTGGATATGGTGGACAATTATTCATCCAAAATCAATTGAAAAAAATCGAAGAACTTGCACAACTTAAAGAA
GAAAACGGATATCACTACGAAATTCAAGTAGATGGTGGTATTAACGTTTCTACAGCAAAACAAGTCAAAGATGCAGGAGC
AACCATAGTTGTTGCAGGTACATTTATCTTTAATTACGAAGATCGTAAAGAAAGAATCGAATCACTTAAATAG

Upstream 100 bases:

>100_bases
AAATCAAATCAAAAGAAATATTACAATCAAGGTATGATAGTTACTTAAATTTCGTAGAAATATTAAAAAATAGAAAAGAA
AAGTATTAGGAGGGGACAAA

Downstream 100 bases:

>100_bases
TCATGAACGTCTATTTGATCGTACATCCTGTACCAAATAACTTAAAACAAATCATTAAAAAGCCCGCTTATGTGATCGCA
GTCGATCAAGGGCTTTTTGA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKVAPSILTANFIRLEDELKSIEEGSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLPMDIHLMVEHPLDWIDKVIFPT
TEFITIHAECNRFKESIRRILYLGKKAGLAIKPSTDVDFIKPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKE
ENGYHYEIQVDGGINVSTAKQVKDAGATIVVAGTFIFNYEDRKERIESLK

Sequences:

>Translated_210_residues
MKVAPSILTANFIRLEDELKSIEEGSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLPMDIHLMVEHPLDWIDKVIFPT
TEFITIHAECNRFKESIRRILYLGKKAGLAIKPSTDVDFIKPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKE
ENGYHYEIQVDGGINVSTAKQVKDAGATIVVAGTFIFNYEDRKERIESLK
>Mature_210_residues
MKVAPSILTANFIRLEDELKSIEEGSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLPMDIHLMVEHPLDWIDKVIFPT
TEFITIHAECNRFKESIRRILYLGKKAGLAIKPSTDVDFIKPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKE
ENGYHYEIQVDGGINVSTAKQVKDAGATIVVAGTFIFNYEDRKERIESLK

Specific function: D-ALLOSE METABOLISM. ESSENTIAL FOR THIS PATHWAY. [C]

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:
GO:0003824: Ribulose-phosphate 3-epimerase
GO:0004750: Ribulose-phosphate 3-epimerase
GO:0005975: Ribulose-phosphate 3-epimerase
GO:0008152: Ribulose-phosphate 3-epimerase
GO:0016853: Ribulose-phosphate 3-epimerase

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=214, Percent_Identity=38.785046728972, Blast_Score=151, Evalue=5e-37,
Organism=Homo sapiens, GI219879828, Length=214, Percent_Identity=37.3831775700935, Blast_Score=142, Evalue=2e-34,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=30.952380952381, Blast_Score=89, Evalue=3e-18,
Organism=Escherichia coli, GI1790523, Length=207, Percent_Identity=38.1642512077295, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1789788, Length=215, Percent_Identity=38.1395348837209, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1790754, Length=210, Percent_Identity=30.952380952381, Blast_Score=94, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=215, Percent_Identity=37.2093023255814, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6322341, Length=223, Percent_Identity=38.1165919282511, Blast_Score=145, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=38.6792452830189, Blast_Score=144, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23664; Mature: 23664

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAPSILTANFIRLEDELKSIEEGSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLPM
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
DIHLMVEHPLDWIDKVIFPTTEFITIHAECNRFKESIRRILYLGKKAGLAIKPSTDVDFI
EEEEEEECCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHH
KPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKEENGYHYEIQVDGGINVSTAK
HHHHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
QVKDAGATIVVAGTFIFNYEDRKERIESLK
HHHHCCCEEEEEEEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MKVAPSILTANFIRLEDELKSIEEGSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLPM
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
DIHLMVEHPLDWIDKVIFPTTEFITIHAECNRFKESIRRILYLGKKAGLAIKPSTDVDFI
EEEEEEECCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHH
KPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKEENGYHYEIQVDGGINVSTAK
HHHHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
QVKDAGATIVVAGTFIFNYEDRKERIESLK
HHHHCCCEEEEEEEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]