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The map label for this gene is rsgA [H]

Identifier: 162447122

GI number: 162447122

Start: 252573

End: 253457

Strand: Direct

Name: rsgA [H]

Synonym: ACL_0252

Alternate gene names: 162447122

Gene position: 252573-253457 (Clockwise)

Preceding gene: 162447121

Following gene: 162447123

Centisome position: 16.87

GC content: 30.85

Gene sequence:

>885_bases
GTGTATGAAGGTTATGCAAAGGGTAAATTTAGAAAGGTGAGAGTGGATAAAGACTCAAGCTTTAATAAGAACATCACAAA
AAGCACTAAAAAAGATGTCAAAGACATCGTTTTAAGTCCTAAAGTTGGTGACATTATCCATTATAGTTTTGAATCTGATC
AGTACATGATTACTGAAGTGCTTGAAAGAAAAAATGAACTTATTAGACCAGATGTTGCAAACATTGATCAAGTATTATTG
GTCTTTTCGGCCATGAGACCGGATTTTAGTTTTAATTTATTGGATAAATTTCTAGTGATATTAAAACATCATGAATTAAC
ACCTGTTATTGTGGTATCTAAAGTAGACTTAATGACGGATGAAAATTTAAAATCTCTTAAAGAAGATTTAAAATTTTATG
AACCATTTTACGATATACATTATGTTAATAGTAAAGCACGCATTGGTATTGATACATTAGATGGTATATTTGAAGATAAA
ATCACGATTTTAGCAGGTCAAACAGGCGCAGGCAAGTCAACACTTTTAAATGCACTTAGACCTGAACTAGAATTAAAAAC
TCAAGAAATATCAGATGCTCTTGGTCGTGGAAAGCACACAACCAGACATTCTGAACTCTACGAGTTTGGTGGTGGGTATA
TTTGTGATACACCAGGATTTAGTAAAGTAGACTTTGAATTTCATGATTATACGACACTAAAAGACTACTTTGTAGACTTT
GCTAAGTATAGTGATCAGTGTAAGTTTGGTCATAGTTGTTTACATATCAACGAGCCTAATTGCATGGTTAAAGAAAAAAT
CAAATCAAAAGAAATATTACAATCAAGGTATGATAGTTACTTAAATTTCGTAGAAATATTAAAAAATAGAAAAGAAAAGT
ATTAG

Upstream 100 bases:

>100_bases
AGTCAAAATCTATAAGGAGATACTTACATTTTTGAATAAAGCACGTGTAATTAAATTAATCGGAGGCTTATATAGCTTTA
AAGACCTTAAGACGCAAACA

Downstream 100 bases:

>100_bases
GAGGGGACAAAATGAAAGTTGCACCGTCGATATTGACAGCAAATTTTATACGCTTGGAAGACGAGCTTAAATCCATCGAG
GAAGGTTCGGATTATATTCA

Product: RNA-binding GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MYEGYAKGKFRKVRVDKDSSFNKNITKSTKKDVKDIVLSPKVGDIIHYSFESDQYMITEVLERKNELIRPDVANIDQVLL
VFSAMRPDFSFNLLDKFLVILKHHELTPVIVVSKVDLMTDENLKSLKEDLKFYEPFYDIHYVNSKARIGIDTLDGIFEDK
ITILAGQTGAGKSTLLNALRPELELKTQEISDALGRGKHTTRHSELYEFGGGYICDTPGFSKVDFEFHDYTTLKDYFVDF
AKYSDQCKFGHSCLHINEPNCMVKEKIKSKEILQSRYDSYLNFVEILKNRKEKY

Sequences:

>Translated_294_residues
MYEGYAKGKFRKVRVDKDSSFNKNITKSTKKDVKDIVLSPKVGDIIHYSFESDQYMITEVLERKNELIRPDVANIDQVLL
VFSAMRPDFSFNLLDKFLVILKHHELTPVIVVSKVDLMTDENLKSLKEDLKFYEPFYDIHYVNSKARIGIDTLDGIFEDK
ITILAGQTGAGKSTLLNALRPELELKTQEISDALGRGKHTTRHSELYEFGGGYICDTPGFSKVDFEFHDYTTLKDYFVDF
AKYSDQCKFGHSCLHINEPNCMVKEKIKSKEILQSRYDSYLNFVEILKNRKEKY
>Mature_294_residues
MYEGYAKGKFRKVRVDKDSSFNKNITKSTKKDVKDIVLSPKVGDIIHYSFESDQYMITEVLERKNELIRPDVANIDQVLL
VFSAMRPDFSFNLLDKFLVILKHHELTPVIVVSKVDLMTDENLKSLKEDLKFYEPFYDIHYVNSKARIGIDTLDGIFEDK
ITILAGQTGAGKSTLLNALRPELELKTQEISDALGRGKHTTRHSELYEFGGGYICDTPGFSKVDFEFHDYTTLKDYFVDF
AKYSDQCKFGHSCLHINEPNCMVKEKIKSKEILQSRYDSYLNFVEILKNRKEKY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=249, Percent_Identity=33.7349397590361, Blast_Score=148, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34051; Mature: 34051

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEGYAKGKFRKVRVDKDSSFNKNITKSTKKDVKDIVLSPKVGDIIHYSFESDQYMITEV
CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH
LERKNELIRPDVANIDQVLLVFSAMRPDFSFNLLDKFLVILKHHELTPVIVVSKVDLMTD
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHCC
ENLKSLKEDLKFYEPFYDIHYVNSKARIGIDTLDGIFEDKITILAGQTGAGKSTLLNALR
HHHHHHHHHHHHHCCHHEEEEECCCCEECHHHHHHHHHCCEEEEECCCCCCHHHHHHHHC
PELELKTQEISDALGRGKHTTRHSELYEFGGGYICDTPGFSKVDFEFHDYTTLKDYFVDF
CHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCEEEEEECCCHHHHHHHHHH
AKYSDQCKFGHSCLHINEPNCMVKEKIKSKEILQSRYDSYLNFVEILKNRKEKY
HHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYEGYAKGKFRKVRVDKDSSFNKNITKSTKKDVKDIVLSPKVGDIIHYSFESDQYMITEV
CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH
LERKNELIRPDVANIDQVLLVFSAMRPDFSFNLLDKFLVILKHHELTPVIVVSKVDLMTD
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHCC
ENLKSLKEDLKFYEPFYDIHYVNSKARIGIDTLDGIFEDKITILAGQTGAGKSTLLNALR
HHHHHHHHHHHHHCCHHEEEEECCCCEECHHHHHHHHHCCEEEEECCCCCCHHHHHHHHC
PELELKTQEISDALGRGKHTTRHSELYEFGGGYICDTPGFSKVDFEFHDYTTLKDYFVDF
CHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCEEEEEECCCHHHHHHHHHH
AKYSDQCKFGHSCLHINEPNCMVKEKIKSKEILQSRYDSYLNFVEILKNRKEKY
HHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA