| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is yitT [H]
Identifier: 162447003
GI number: 162447003
Start: 116690
End: 117679
Strand: Direct
Name: yitT [H]
Synonym: ACL_0133
Alternate gene names: 162447003
Gene position: 116690-117679 (Clockwise)
Preceding gene: 162447002
Following gene: 162447004
Centisome position: 7.79
GC content: 34.34
Gene sequence:
>990_bases ATGAATAAACTTAAAGCTTGGATTGGTTCCACAAAGTTTCAAAGGCAAATTAAACCAGAAATAAAAAGAACGATCGCTGT CATAGTATTTACAGTGATTTATGGTATTGGTGTTACCTGGTTTTTAGAGGCTAGTGTTATACCAATGTATACCGGTGGTA TACCAGGGCTAGCACAATTAATTAGAGATTTTATGAAGTTCACGCTTGGCATTGACACTTCTGGGTGGGAAGGTTTATTT TTTGGATTGTTTATTACACTATCCAATATACCAATTATGATTTTAGGTTGGTTTGGTGTATCTAAGAAATTTGTTATTTA CTCCATGATTTCAGTTATTATTCAAGCAACCATGTTAGGATTTATTCCTTCTATTAATATTGGATTATCAAGCGAATCTC AAGCCTTGACAGCAACCATTTTAGGTGGAATATTCATAGGTATTGGTGTGGGTGGTGCCTTAAAATATGGTACATCCACG GGTGGACTTGATGTCATTGCACAATATATTTCATTAAAAAAAGGACAAAGCGTCGGCTTTGTCTCAATGGTATTAAATAT TGTAACAGCTTTACTGGGTGGTTTAATCACAGCACCCGACCTGATTGCAAGAGGTGTTTTACCAGGTGTTACCCAAACAC TTGCGGCAGCAGGTATCGTTATTAGTTATACCATTTTAAGATTAATTATTACAACGATTGTTACAGATAAACTGCATACC GCTTATCATTTTACAATGGTTGAAGTGATCACCAATAATCCACAAGACATTGTTTCTGATATTTTATCAAACATTTACCG TGGGGTTACATTAATTAATGTTCAAGGTGGTTATACAAAACAAGATAAGACATTAATTAAAGTAGTGATTTCAAGTTATG AGTTTACGACACTTCATCAGCTTGTTAATAGGCTAGATAGTAAAGCATTTATTGTTGTGACACCAGTAAAACAAGTCTAT GGTAATTTTAAAAAGCGCACCATTGCATAA
Upstream 100 bases:
>100_bases ACATTTGGGTTATACCCAGAACAACAAATTGGTACTGCAAAAGTATTATTTGAAAGATTTGATTTAGAAAAGAAATTAAA TGAGATTATAGGGTAAATAG
Downstream 100 bases:
>100_bases TAATTTTTAATAGGGGGATTTATGAAAGACTTTATTATAGCTACAACACCAACACTTGAAGGATATCGTATTGTTAAATA CATTGATGTGATCTTTGAAG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNKLKAWIGSTKFQRQIKPEIKRTIAVIVFTVIYGIGVTWFLEASVIPMYTGGIPGLAQLIRDFMKFTLGIDTSGWEGLF FGLFITLSNIPIMILGWFGVSKKFVIYSMISVIIQATMLGFIPSINIGLSSESQALTATILGGIFIGIGVGGALKYGTST GGLDVIAQYISLKKGQSVGFVSMVLNIVTALLGGLITAPDLIARGVLPGVTQTLAAAGIVISYTILRLIITTIVTDKLHT AYHFTMVEVITNNPQDIVSDILSNIYRGVTLINVQGGYTKQDKTLIKVVISSYEFTTLHQLVNRLDSKAFIVVTPVKQVY GNFKKRTIA
Sequences:
>Translated_329_residues MNKLKAWIGSTKFQRQIKPEIKRTIAVIVFTVIYGIGVTWFLEASVIPMYTGGIPGLAQLIRDFMKFTLGIDTSGWEGLF FGLFITLSNIPIMILGWFGVSKKFVIYSMISVIIQATMLGFIPSINIGLSSESQALTATILGGIFIGIGVGGALKYGTST GGLDVIAQYISLKKGQSVGFVSMVLNIVTALLGGLITAPDLIARGVLPGVTQTLAAAGIVISYTILRLIITTIVTDKLHT AYHFTMVEVITNNPQDIVSDILSNIYRGVTLINVQGGYTKQDKTLIKVVISSYEFTTLHQLVNRLDSKAFIVVTPVKQVY GNFKKRTIA >Mature_329_residues MNKLKAWIGSTKFQRQIKPEIKRTIAVIVFTVIYGIGVTWFLEASVIPMYTGGIPGLAQLIRDFMKFTLGIDTSGWEGLF FGLFITLSNIPIMILGWFGVSKKFVIYSMISVIIQATMLGFIPSINIGLSSESQALTATILGGIFIGIGVGGALKYGTST GGLDVIAQYISLKKGQSVGFVSMVLNIVTALLGGLITAPDLIARGVLPGVTQTLAAAGIVISYTILRLIITTIVTDKLHT AYHFTMVEVITNNPQDIVSDILSNIYRGVTLINVQGGYTKQDKTLIKVVISSYEFTTLHQLVNRLDSKAFIVVTPVKQVY GNFKKRTIA
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 35680; Mature: 35680
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKAWIGSTKFQRQIKPEIKRTIAVIVFTVIYGIGVTWFLEASVIPMYTGGIPGLAQL CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHH IRDFMKFTLGIDTSGWEGLFFGLFITLSNIPIMILGWFGVSKKFVIYSMISVIIQATMLG HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH FIPSINIGLSSESQALTATILGGIFIGIGVGGALKYGTSTGGLDVIAQYISLKKGQSVGF HCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCHH VSMVLNIVTALLGGLITAPDLIARGVLPGVTQTLAAAGIVISYTILRLIITTIVTDKLHT HHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYHFTMVEVITNNPQDIVSDILSNIYRGVTLINVQGGYTKQDKTLIKVVISSYEFTTLHQ HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHH LVNRLDSKAFIVVTPVKQVYGNFKKRTIA HHHHHCCCEEEEEECHHHHHCCHHHHCCC >Mature Secondary Structure MNKLKAWIGSTKFQRQIKPEIKRTIAVIVFTVIYGIGVTWFLEASVIPMYTGGIPGLAQL CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHH IRDFMKFTLGIDTSGWEGLFFGLFITLSNIPIMILGWFGVSKKFVIYSMISVIIQATMLG HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH FIPSINIGLSSESQALTATILGGIFIGIGVGGALKYGTSTGGLDVIAQYISLKKGQSVGF HCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCHH VSMVLNIVTALLGGLITAPDLIARGVLPGVTQTLAAAGIVISYTILRLIITTIVTDKLHT HHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYHFTMVEVITNNPQDIVSDILSNIYRGVTLINVQGGYTKQDKTLIKVVISSYEFTTLHQ HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHH LVNRLDSKAFIVVTPVKQVYGNFKKRTIA HHHHHCCCEEEEEECHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226659; 9025291; 9353931; 9384377 [H]