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The map label for this gene is ybaF [H]

Identifier: 162446995

GI number: 162446995

Start: 107147

End: 108151

Strand: Direct

Name: ybaF [H]

Synonym: ACL_0125

Alternate gene names: 162446995

Gene position: 107147-108151 (Clockwise)

Preceding gene: 162446994

Following gene: 162446996

Centisome position: 7.16

GC content: 30.55

Gene sequence:

>1005_bases
ATGAATATTAAAATAGGGCAATATATAGCAGGTAATTCTATACTACATAAACTAGATCCTAGAATTAAAATCATGAGCAT
GATTTTACTTATTGTAGCAATCTTTTTAGTACCAATTAATTTAGAACCGAAAAATATCATTTGGATGATTTCATTATTCC
TATTTTCATTAGGTGCTGTCTTTTTATCAGGTATTCGTATTGGCAAAGTACTTCAGGGTCTTAAAGCAATTGTTTTCTTA
ATGACTTTCACATTTATCATTCAACTATTTACCATTCAACCGGTAGACGAAACAGCCATACTTGACCAACCAATGACTTT
AAGTCTTATATCTGTTATTGGTCTAGTATTACTAACGTTTTTCTATCACTATTTAAAACCTAAAATTAAATTCCGTACCA
CTTGGTTTTTTACATATGTCATACTGATATTTGTTTTACAGTGGTTGGTTATAATGTATGTGCCATCTTATGACTTAGTA
TTTAACTTTGATTATAATTTTAAAGTCTTTCCATCAGGGCTGATTCGTGGTGGATTTATCTTCTTAAGAATTATCGCTGT
GATGGTGATTGCATCGCTTCTTACATTTACAACCTCTACAATTGAATTAAATGATGGCTTAGAATCTTTAATGAAACCAT
TAAGAGTGATTAAAGTGCCAACCTATATTTTTTCAATGATGATTTCTTTAACACTAAGATCAATTCCAACATTACTTGTT
GAAACAGATAAGATTATGAAAGCTCAAACCTCTCGTGGAGCGGACTTTAATGAATCTACACTACGTCAAAAGATTCGACA
AATTATCGCACTCTTAATTCCGGTATTCGTTATTAGTTTTGATAGAGCAGATGATTTAAGTAATGCGATGGAAGCTAGAG
GCTATATTATTGGAGAACCTAGAACGAAATTGGATGTCTATAAAATCAACTATAAAGATATTATAATTTTAAGTGTTGTC
ATACTCATAATTATTGGATTGTTGGTGACTAGATTTGCGTTATAA

Upstream 100 bases:

>100_bases
CAATGAAAGTATTAAATCATCTGCATCATACATTAGGCTATCCTAAGAAGTTAGTACTATCCAATGATGAACTCCTTAAA
CATTTAAAGGAGGTACAAAA

Downstream 100 bases:

>100_bases
GGCAATTTTCAGTTATGATGGCACAAATTATAGTGGCTATCAAAAACAAATTAATCAATTAGGTATTCAAACAGTTATCG
AAAAAGCATTTAGGCTGATG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNIKIGQYIAGNSILHKLDPRIKIMSMILLIVAIFLVPINLEPKNIIWMISLFLFSLGAVFLSGIRIGKVLQGLKAIVFL
MTFTFIIQLFTIQPVDETAILDQPMTLSLISVIGLVLLTFFYHYLKPKIKFRTTWFFTYVILIFVLQWLVIMYVPSYDLV
FNFDYNFKVFPSGLIRGGFIFLRIIAVMVIASLLTFTTSTIELNDGLESLMKPLRVIKVPTYIFSMMISLTLRSIPTLLV
ETDKIMKAQTSRGADFNESTLRQKIRQIIALLIPVFVISFDRADDLSNAMEARGYIIGEPRTKLDVYKINYKDIIILSVV
ILIIIGLLVTRFAL

Sequences:

>Translated_334_residues
MNIKIGQYIAGNSILHKLDPRIKIMSMILLIVAIFLVPINLEPKNIIWMISLFLFSLGAVFLSGIRIGKVLQGLKAIVFL
MTFTFIIQLFTIQPVDETAILDQPMTLSLISVIGLVLLTFFYHYLKPKIKFRTTWFFTYVILIFVLQWLVIMYVPSYDLV
FNFDYNFKVFPSGLIRGGFIFLRIIAVMVIASLLTFTTSTIELNDGLESLMKPLRVIKVPTYIFSMMISLTLRSIPTLLV
ETDKIMKAQTSRGADFNESTLRQKIRQIIALLIPVFVISFDRADDLSNAMEARGYIIGEPRTKLDVYKINYKDIIILSVV
ILIIIGLLVTRFAL
>Mature_334_residues
MNIKIGQYIAGNSILHKLDPRIKIMSMILLIVAIFLVPINLEPKNIIWMISLFLFSLGAVFLSGIRIGKVLQGLKAIVFL
MTFTFIIQLFTIQPVDETAILDQPMTLSLISVIGLVLLTFFYHYLKPKIKFRTTWFFTYVILIFVLQWLVIMYVPSYDLV
FNFDYNFKVFPSGLIRGGFIFLRIIAVMVIASLLTFTTSTIELNDGLESLMKPLRVIKVPTYIFSMMISLTLRSIPTLLV
ETDKIMKAQTSRGADFNESTLRQKIRQIIALLIPVFVISFDRADDLSNAMEARGYIIGEPRTKLDVYKINYKDIIILSVV
ILIIIGLLVTRFAL

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 38155; Mature: 38155

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKIGQYIAGNSILHKLDPRIKIMSMILLIVAIFLVPINLEPKNIIWMISLFLFSLGAV
CCCEECCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FLSGIRIGKVLQGLKAIVFLMTFTFIIQLFTIQPVDETAILDQPMTLSLISVIGLVLLTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
FYHYLKPKIKFRTTWFFTYVILIFVLQWLVIMYVPSYDLVFNFDYNFKVFPSGLIRGGFI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHHHHHHH
FLRIIAVMVIASLLTFTTSTIELNDGLESLMKPLRVIKVPTYIFSMMISLTLRSIPTLLV
HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETDKIMKAQTSRGADFNESTLRQKIRQIIALLIPVFVISFDRADDLSNAMEARGYIIGEP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCC
RTKLDVYKINYKDIIILSVVILIIIGLLVTRFAL
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIKIGQYIAGNSILHKLDPRIKIMSMILLIVAIFLVPINLEPKNIIWMISLFLFSLGAV
CCCEECCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FLSGIRIGKVLQGLKAIVFLMTFTFIIQLFTIQPVDETAILDQPMTLSLISVIGLVLLTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
FYHYLKPKIKFRTTWFFTYVILIFVLQWLVIMYVPSYDLVFNFDYNFKVFPSGLIRGGFI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHHHHHHH
FLRIIAVMVIASLLTFTTSTIELNDGLESLMKPLRVIKVPTYIFSMMISLTLRSIPTLLV
HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETDKIMKAQTSRGADFNESTLRQKIRQIIALLIPVFVISFDRADDLSNAMEARGYIIGEP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCC
RTKLDVYKINYKDIIILSVVILIIIGLLVTRFAL
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]