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The map label for this gene is rpmJ

Identifier: 162446981

GI number: 162446981

Start: 96157

End: 96273

Strand: Direct

Name: rpmJ

Synonym: ACL_0111

Alternate gene names: 162446981

Gene position: 96157-96273 (Clockwise)

Preceding gene: 162446980

Following gene: 162446982

Centisome position: 6.42

GC content: 39.32

Gene sequence:

>117_bases
ATGAAAGTTAAAGCATCAGTTAAAAAGCGCAGCGCAGATGACATCATTGTGCGCCGCAAAGGTCGCGTATACGTGATCAA
CAAAAAAAATAGAAGACACAATCAAAGACAAGGTTAA

Upstream 100 bases:

>100_bases
CATACGCATTTTACCTGGTGATAAAGTAACAGTTGAATTATCACCATATGATTTATCACGCGGACGTATAACATACCGCA
AAAAATAAGGAGCAATTAAA

Downstream 100 bases:

>100_bases
GGAGATTAAACTATGGCAAGAATTGCAGGAGTAGACATCCCTACTCAAAAACGAGTGGTTATCTCGTTACAATACATCTA
TGGCATTGGTCAAACTACAG

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MKVKASVKKRSADDIIVRRKGRVYVINKKNRRHNQRQG

Sequences:

>Translated_38_residues
MKVKASVKKRSADDIIVRRKGRVYVINKKNRRHNQRQG
>Mature_38_residues
MKVKASVKKRSADDIIVRRKGRVYVINKKNRRHNQRQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_ACHLI (A9NEF7)

Other databases:

- EMBL:   CP000896
- RefSeq:   YP_001620113.1
- ProteinModelPortal:   A9NEF7
- SMR:   A9NEF7
- GeneID:   5804124
- GenomeReviews:   CP000896_GR
- KEGG:   acl:ACL_0111
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   ALAI441768:ACL_0111-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4534; Mature: 4534

Theoretical pI: Translated: 12.42; Mature: 12.42

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKASVKKRSADDIIVRRKGRVYVINKKNRRHNQRQG
CCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKVKASVKKRSADDIIVRRKGRVYVINKKNRRHNQRQG
CCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA