| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is araG [C]
Identifier: 162420171
GI number: 162420171
Start: 1570439
End: 1571245
Strand: Direct
Name: araG [C]
Synonym: YpAngola_A1520
Alternate gene names: 162420171
Gene position: 1570439-1571245 (Clockwise)
Preceding gene: 162421558
Following gene: 162420740
Centisome position: 34.87
GC content: 53.66
Gene sequence:
>807_bases ATGCTCAATATGGCCTTACACATAACATGGTTTACACCCATTAACGGTTTTACACCCATTATGATTTTACACACAGTGCG CGACGGGAAGGCGGCGGACGATCCGATTCTGAGGATCGAGAATATCAGCAAAAACTATGGCCCGGTGCAGGCCTTGTGCG GCGTGACGACCGCGATCCGGCGCGGCGCTATTCACGGACTTCTTGGCGAGAATGGTGCTGGGAAATCAACGCTGGTGGGG ATTATCTCGGGGCAGGTGACGCCGACCTCCGGGCGGATATTTATGGATGGTCGCCTTCTCGAACATGTTGATGTTAAAGC GATGGAGGAGGCGGGCGTCTTTCTGGTCACGCAGGAACCGATGATTATCGACAAGATGACCACCGCAGAGAATCTGATGT TGGGGATCTGGCCGACCAAGAACGGTGTTATCGATTGGAAAACATTGCGATCCGATGCGGCGCGGATACTTGATGGGTCC GGCATCAATGCCAGCACCCTTGCCGGGCATCTGGACGCAGTCGCGCGGCGCAAATTGAATATTCTGCGGGCCATGTTTTC CGGGGGCAAAGTCATCATTCTTGATGAGCCGACGCGCGGCATTGATGTGGGTGTCAAACAGGACGTGCTGCGCATTATTG ACGAACTGAGTGATGCAGGCGTCGCAGTGATTATCGTTTCGACCGATATGGATGAATTGGCACGCTCAGTTGATCGGGTC TGCATTTTCGAACATGGCGCTATTAAAGAGATATTGACGGGAGATGACATCACCGCCGAACGTCTGCGGGCATCTGTGCA GGCATAA
Upstream 100 bases:
>100_bases GCGGACCCCATCGTTTCGTAGGCCCAGATCAGCGTCGGAGAGGGGATGATTGCTCTGACATTTATCCGGCAAGGTGAGGG TGAGCGAGCGATAGGTTTTT
Downstream 100 bases:
>100_bases AGCCACGGGATAATAACCAGAGCGGAGAGAGGGAAATGGATAAGGCAACCGAGACCCGCCGCGAGGGAGCACCTACCGCG AGCAAACTCAACGGCCAGGC
Product: ribose import ATP-binding protein RbsA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLNMALHITWFTPINGFTPIMILHTVRDGKAADDPILRIENISKNYGPVQALCGVTTAIRRGAIHGLLGENGAGKSTLVG IISGQVTPTSGRIFMDGRLLEHVDVKAMEEAGVFLVTQEPMIIDKMTTAENLMLGIWPTKNGVIDWKTLRSDAARILDGS GINASTLAGHLDAVARRKLNILRAMFSGGKVIILDEPTRGIDVGVKQDVLRIIDELSDAGVAVIIVSTDMDELARSVDRV CIFEHGAIKEILTGDDITAERLRASVQA
Sequences:
>Translated_268_residues MLNMALHITWFTPINGFTPIMILHTVRDGKAADDPILRIENISKNYGPVQALCGVTTAIRRGAIHGLLGENGAGKSTLVG IISGQVTPTSGRIFMDGRLLEHVDVKAMEEAGVFLVTQEPMIIDKMTTAENLMLGIWPTKNGVIDWKTLRSDAARILDGS GINASTLAGHLDAVARRKLNILRAMFSGGKVIILDEPTRGIDVGVKQDVLRIIDELSDAGVAVIIVSTDMDELARSVDRV CIFEHGAIKEILTGDDITAERLRASVQA >Mature_268_residues MLNMALHITWFTPINGFTPIMILHTVRDGKAADDPILRIENISKNYGPVQALCGVTTAIRRGAIHGLLGENGAGKSTLVG IISGQVTPTSGRIFMDGRLLEHVDVKAMEEAGVFLVTQEPMIIDKMTTAENLMLGIWPTKNGVIDWKTLRSDAARILDGS GINASTLAGHLDAVARRKLNILRAMFSGGKVIILDEPTRGIDVGVKQDVLRIIDELSDAGVAVIIVSTDMDELARSVDRV CIFEHGAIKEILTGDDITAERLRASVQA
Specific function: Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system [H]
COG id: COG1129
COG function: function code G; ABC-type sugar transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=215, Percent_Identity=27.4418604651163, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI30795238, Length=215, Percent_Identity=27.4418604651163, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI27436953, Length=222, Percent_Identity=31.981981981982, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI45446740, Length=229, Percent_Identity=27.0742358078603, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI47078218, Length=229, Percent_Identity=27.0742358078603, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI21536376, Length=217, Percent_Identity=28.110599078341, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI31657092, Length=222, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI116734710, Length=190, Percent_Identity=29.4736842105263, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI153792144, Length=227, Percent_Identity=31.7180616740088, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI27477115, Length=228, Percent_Identity=31.5789473684211, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI150417984, Length=235, Percent_Identity=25.9574468085106, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI27262624, Length=231, Percent_Identity=26.8398268398268, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI27262626, Length=231, Percent_Identity=26.8398268398268, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9665248, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI42741659, Length=226, Percent_Identity=23.4513274336283, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788210, Length=221, Percent_Identity=32.579185520362, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1790525, Length=219, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788897, Length=219, Percent_Identity=34.703196347032, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=30.6976744186047, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787792, Length=214, Percent_Identity=29.4392523364486, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790190, Length=218, Percent_Identity=30.7339449541284, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1788472, Length=218, Percent_Identity=28.8990825688073, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789991, Length=216, Percent_Identity=30.0925925925926, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1786319, Length=228, Percent_Identity=31.140350877193, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87082268, Length=229, Percent_Identity=30.5676855895196, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081782, Length=243, Percent_Identity=27.9835390946502, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87081791, Length=234, Percent_Identity=26.0683760683761, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48994997, Length=225, Percent_Identity=25.7777777777778, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=25.4310344827586, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789873, Length=219, Percent_Identity=26.9406392694064, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786803, Length=231, Percent_Identity=25.974025974026, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=29.2452830188679, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789593, Length=229, Percent_Identity=27.9475982532751, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787712, Length=224, Percent_Identity=25.4464285714286, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=23.5042735042735, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=24.4541484716157, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=27.8008298755187, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=27.4261603375527, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787105, Length=223, Percent_Identity=26.9058295964126, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786253, Length=206, Percent_Identity=26.6990291262136, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=23.7068965517241, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787758, Length=213, Percent_Identity=26.7605633802817, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=24.7747747747748, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=26.027397260274, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=26.1682242990654, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787759, Length=247, Percent_Identity=28.7449392712551, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI2367384, Length=239, Percent_Identity=26.7782426778243, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=24.2290748898678, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=25.4464285714286, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI48994943, Length=229, Percent_Identity=24.0174672489083, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=26.5822784810127, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787547, Length=248, Percent_Identity=23.3870967741935, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786698, Length=220, Percent_Identity=24.0909090909091, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789032, Length=265, Percent_Identity=22.6415094339623, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788053, Length=208, Percent_Identity=23.5576923076923, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786703, Length=227, Percent_Identity=25.9911894273128, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787112, Length=238, Percent_Identity=23.9495798319328, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788644, Length=230, Percent_Identity=27.3913043478261, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533608, Length=231, Percent_Identity=30.7359307359307, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI193202349, Length=217, Percent_Identity=28.110599078341, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71983516, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983510, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983523, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17510237, Length=205, Percent_Identity=30.7317073170732, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71984940, Length=218, Percent_Identity=27.5229357798165, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565586, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71988343, Length=220, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17543740, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193211017, Length=216, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211015, Length=216, Percent_Identity=25, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71996809, Length=216, Percent_Identity=25, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17565938, Length=210, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI221512771, Length=239, Percent_Identity=29.2887029288703, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI221500365, Length=240, Percent_Identity=30.4166666666667, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI116007184, Length=240, Percent_Identity=30.4166666666667, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24666092, Length=225, Percent_Identity=24.8888888888889, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24643674, Length=222, Percent_Identity=23.4234234234234, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015862 - InterPro: IPR015861 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.17 [H]
Molecular weight: Translated: 28915; Mature: 28915
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNMALHITWFTPINGFTPIMILHTVRDGKAADDPILRIENISKNYGPVQALCGVTTAIR CCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RGAIHGLLGENGAGKSTLVGIISGQVTPTSGRIFMDGRLLEHVDVKAMEEAGVFLVTQEP HCCHHHHCCCCCCCCCEEEEEEECEEECCCCEEEECCCEEHHCCHHHHHHCCEEEEECCC MIIDKMTTAENLMLGIWPTKNGVIDWKTLRSDAARILDGSGINASTLAGHLDAVARRKLN EEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ILRAMFSGGKVIILDEPTRGIDVGVKQDVLRIIDELSDAGVAVIIVSTDMDELARSVDRV HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHE CIFEHGAIKEILTGDDITAERLRASVQA EEECCCCHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure MLNMALHITWFTPINGFTPIMILHTVRDGKAADDPILRIENISKNYGPVQALCGVTTAIR CCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RGAIHGLLGENGAGKSTLVGIISGQVTPTSGRIFMDGRLLEHVDVKAMEEAGVFLVTQEP HCCHHHHCCCCCCCCCEEEEEEECEEECCCCEEEECCCEEHHCCHHHHHHCCEEEEECCC MIIDKMTTAENLMLGIWPTKNGVIDWKTLRSDAARILDGSGINASTLAGHLDAVARRKLN EEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ILRAMFSGGKVIILDEPTRGIDVGVKQDVLRIIDELSDAGVAVIIVSTDMDELARSVDRV HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHE CIFEHGAIKEILTGDDITAERLRASVQA EEECCCCHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]