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The map label for this gene is lolA [H]

Identifier: 162149018

GI number: 162149018

Start: 3338605

End: 3339276

Strand: Reverse

Name: lolA [H]

Synonym: GDI_3248

Alternate gene names: 162149018

Gene position: 3339276-3338605 (Counterclockwise)

Preceding gene: 162149019

Following gene: 162149016

Centisome position: 84.66

GC content: 67.71

Gene sequence:

>672_bases
ATGACCCGCCCCAACTGCCTGTTTCCCCTGCCGACCGGTGTCGCATGCGCCCTGCTGGCGGGGCTTGCCTGTCTGCCGGC
TTCCCTCCATGCCCAGACGGTGACGACTCCCGCGCCCACGGCCATGACGCTGGCCCTGGCCCCGGCCGACCGGGCCTGGG
TCCAGCGCGTCCAGGACTACCTGAACGGCGTGACGACGCTGGAGGCGCAGTTCCAGCAACTGGCCCCCGACGGCAAGCGC
ACGACCGGAACGGCGTGGCTGAGCCGTCCGGGGCGGATGCGCTTCGAATATGACAAGCCCAGCCCGCTGCTTCTGGTGGC
CAATCACGGCCAGGTCGTCTTCAACGACAGCCAGTTGGGCCAGACCACGACGCTGCCGCTGGACAAGACGCCGCTGGGGC
TGCTGCTGCGGCCCGGGCTGCAACTCTCGGGGGATGTGACCGTTACGGGGTTCACACATTCCAACGGGTTGGTGCAGGTC
ACGCTGGTGCGGACGGCCTCGCCGGCGGACGGGAGCCTGACGCTGGTGTTTCATGACAGCCCGATGTCCCTTCGGTCCTG
GAGCGTCGTCGATGCCCAGGGGCAGGAAACCAGGGTCGATCTGTACAATATCCGCCTGGGCGGCGGCCCCTTGCCGGACG
GGCTGTTCGATACGGAAATTGGCGAGCAATAA

Upstream 100 bases:

>100_bases
CATCCTGATCGGTTCGGCGGGGTAGGGGCTGCGCCTTGATCTTGCCCGGATGATCGGGCAACGAGATCGGGAACGATTCC
GCTGCGACCGATCGGACCCC

Downstream 100 bases:

>100_bases
TAATATCCTAGGGCTGGTCCCTTTCCCGGGCGAGTTCCAGCGCGCGGGCATAGACCGTGCGGCGGGGCAGGTTGACGGCG
CCGGCGACCAGCGCGGCCGC

Product: outer membrane lipoprotein carrier protein LolA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTRPNCLFPLPTGVACALLAGLACLPASLHAQTVTTPAPTAMTLALAPADRAWVQRVQDYLNGVTTLEAQFQQLAPDGKR
TTGTAWLSRPGRMRFEYDKPSPLLLVANHGQVVFNDSQLGQTTTLPLDKTPLGLLLRPGLQLSGDVTVTGFTHSNGLVQV
TLVRTASPADGSLTLVFHDSPMSLRSWSVVDAQGQETRVDLYNIRLGGGPLPDGLFDTEIGEQ

Sequences:

>Translated_223_residues
MTRPNCLFPLPTGVACALLAGLACLPASLHAQTVTTPAPTAMTLALAPADRAWVQRVQDYLNGVTTLEAQFQQLAPDGKR
TTGTAWLSRPGRMRFEYDKPSPLLLVANHGQVVFNDSQLGQTTTLPLDKTPLGLLLRPGLQLSGDVTVTGFTHSNGLVQV
TLVRTASPADGSLTLVFHDSPMSLRSWSVVDAQGQETRVDLYNIRLGGGPLPDGLFDTEIGEQ
>Mature_222_residues
TRPNCLFPLPTGVACALLAGLACLPASLHAQTVTTPAPTAMTLALAPADRAWVQRVQDYLNGVTTLEAQFQQLAPDGKRT
TGTAWLSRPGRMRFEYDKPSPLLLVANHGQVVFNDSQLGQTTTLPLDKTPLGLLLRPGLQLSGDVTVTGFTHSNGLVQVT
LVRTASPADGSLTLVFHDSPMSLRSWSVVDAQGQETRVDLYNIRLGGGPLPDGLFDTEIGEQ

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 23828; Mature: 23697

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPNCLFPLPTGVACALLAGLACLPASLHAQTVTTPAPTAMTLALAPADRAWVQRVQDY
CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHH
LNGVTTLEAQFQQLAPDGKRTTGTAWLSRPGRMRFEYDKPSPLLLVANHGQVVFNDSQLG
HCCEEHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCEEEEECCCEEEECCCCCC
QTTTLPLDKTPLGLLLRPGLQLSGDVTVTGFTHSNGLVQVTLVRTASPADGSLTLVFHDS
CEEECCCCCCCCCEEECCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEECC
PMSLRSWSVVDAQGQETRVDLYNIRLGGGPLPDGLFDTEIGEQ
CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRPNCLFPLPTGVACALLAGLACLPASLHAQTVTTPAPTAMTLALAPADRAWVQRVQDY
CCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHHHH
LNGVTTLEAQFQQLAPDGKRTTGTAWLSRPGRMRFEYDKPSPLLLVANHGQVVFNDSQLG
HCCEEHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCEEEEECCCEEEECCCCCC
QTTTLPLDKTPLGLLLRPGLQLSGDVTVTGFTHSNGLVQVTLVRTASPADGSLTLVFHDS
CEEECCCCCCCCCEEECCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEECC
PMSLRSWSVVDAQGQETRVDLYNIRLGGGPLPDGLFDTEIGEQ
CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA