| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162149016
Identifier: 162149016
GI number: 162149016
Start: 3336037
End: 3337521
Strand: Reverse
Name: 162149016
Synonym: GDI_3246
Alternate gene names: NA
Gene position: 3337521-3336037 (Counterclockwise)
Preceding gene: 162149018
Following gene: 162149004
Centisome position: 84.62
GC content: 75.69
Gene sequence:
>1485_bases ATGGCGGCCTCGCTGGCCGGGCTTGCGGCCTGTGCCGGTCCCGCGGCGGGTCCCGCCGGCCCCGTGACCGCAGGCCCGCC GGCACCCGCCCCCACGGTTCCCGCCGGGCGGACGGTCGGCGTGCTGCTGCCGCTGAGCGGGGGCAATGCGCGGCTGGGGC AGGAAATGCTGGCCTCGACACGGCTGGCACTGGGCGCGCCCACCGCGCCGCCGCTGGATATCCGCGATACCGAAGCCGCC GGGGGCGCGGGGGCCGCGGCCCAGGCGGCGGTGGCCGCCGGCGACGGCGTGATCCTGGGGCCGCTGACGGCGGCCGAGAC CACGCAGGCGGCCGCGGTCACGGCTTCGACGTCCATCCCGATGCTGGCCTATACCAGCGACCTGTCGCTGGGGCGCCCCG GCGTGTGGGCGCTGGGCATCGCGCCGGAACAGCAGGTCGAACGGCTGGGGGACGGCCGCGCGGGCCGAGGGACGGCAGCA TTTTGCCGCCTTCCTGCCCGACACGGCGCTTGGCCGGGCGATGGGCAAGGCCCTACGGAGGTCTGTGCCGCGCAGGGGCT GGCGACGCCGGACGTCGTCTATCATACCACCAGCCCGGCCAGCATCACCCAGTGGCTGAAGACGCTGTCCGCCTACGACA CGCGCCTTGCCGCCGCCAGCCCGGTGCCCAGGCGCCGGTGCCGCCCGACATGTCGGCGGTCGACCCGCTGGGGGCCGGGG CGCCCGCTGTTCCGGCGCCCGCGACAGGGCATGGGGACGGCCCCCGCCGCCCCGGCCGTGCCCAAACTGGGGGCGCCGCC GTTCGATGCGCTGCTGCTGGCCGATACCGGGCTGCAACTGGCCAGCGTGATCGATGCGTTGCAGGCGGTGCAGGCGATCG GCCCGGCCGCGACCGGCACCGCGGCAGCGGCGCAGGCCCCGGCCATCACCGTGGACACGCCCCCGGCGGCGGCCCCGGTG GCGGGCGCGGCGGTGACCGGGGTCCCGGCCCATACGCCGGTCGGCGCCCTGACCGTGCCCCCGACCGTCAGCACCCAGCC GGCCGTCGCCCCCCCGTCGCCGCCGCAGCAGGCGTCGGTGCCGGTGCGCATCCTGGGTACCGGGTTGTGGGGGGCGTTCG CCGGCAAGCTGGGGCGCCTGGAAGGGGCGTGGTATGCGGCGCCGGACCCGGGCGCACGCCAGCGGTTCATCCAGATCTTC ATGGCCCGGTATCATCACATGCCCACGCCGCTGAGCGACCTGTCCTATGATTCGGCGGCGCTGGTCGGTGCGCTGGACCG CGCCCGGCCGCCGGGACAGCCGAACGGATACGCGATCGCGGCGTTGACGCGACCGGATGGATTTTCAGGGGTGGACGGAG TGTTCGGATTGACGCCCGATGGCCAGACACTGCGTGACCTGGCGATTTTCCAGATCCAGCCCGGCGGGGGCGGCCGGATC GTCAGTCCGGCGGCGGGGCGTCTGGTGCGGGACCAGCGAAGCTGA
Upstream 100 bases:
>100_bases GGCAGGGACGAGGAAGATGAGTCGGTCATTCGCAATCCGGACACAGAAACGGCGTGCAGAGTCAGCCCGTCCCGGCCCGT CTGGCAAGGCCGGACTGCTG
Downstream 100 bases:
>100_bases GGAAAGGGGGGGCGGCCGATCAGGCCGCCGCCGTCGCACCGCAGGCCAGGACAGGACGAATGGCGTACAACGCGGCTTCG AACCGGTGAAAGGTGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid Transporter Periplasmic Protein; Lipoprotein-Like Protein
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MAASLAGLAACAGPAAGPAGPVTAGPPAPAPTVPAGRTVGVLLPLSGGNARLGQEMLASTRLALGAPTAPPLDIRDTEAA GGAGAAAQAAVAAGDGVILGPLTAAETTQAAAVTASTSIPMLAYTSDLSLGRPGVWALGIAPEQQVERLGDGRAGRGTAA FCRLPARHGAWPGDGQGPTEVCAAQGLATPDVVYHTTSPASITQWLKTLSAYDTRLAAASPVPRRRCRPTCRRSTRWGPG RPLFRRPRQGMGTAPAAPAVPKLGAPPFDALLLADTGLQLASVIDALQAVQAIGPAATGTAAAAQAPAITVDTPPAAAPV AGAAVTGVPAHTPVGALTVPPTVSTQPAVAPPSPPQQASVPVRILGTGLWGAFAGKLGRLEGAWYAAPDPGARQRFIQIF MARYHHMPTPLSDLSYDSAALVGALDRARPPGQPNGYAIAALTRPDGFSGVDGVFGLTPDGQTLRDLAIFQIQPGGGGRI VSPAAGRLVRDQRS
Sequences:
>Translated_494_residues MAASLAGLAACAGPAAGPAGPVTAGPPAPAPTVPAGRTVGVLLPLSGGNARLGQEMLASTRLALGAPTAPPLDIRDTEAA GGAGAAAQAAVAAGDGVILGPLTAAETTQAAAVTASTSIPMLAYTSDLSLGRPGVWALGIAPEQQVERLGDGRAGRGTAA FCRLPARHGAWPGDGQGPTEVCAAQGLATPDVVYHTTSPASITQWLKTLSAYDTRLAAASPVPRRRCRPTCRRSTRWGPG RPLFRRPRQGMGTAPAAPAVPKLGAPPFDALLLADTGLQLASVIDALQAVQAIGPAATGTAAAAQAPAITVDTPPAAAPV AGAAVTGVPAHTPVGALTVPPTVSTQPAVAPPSPPQQASVPVRILGTGLWGAFAGKLGRLEGAWYAAPDPGARQRFIQIF MARYHHMPTPLSDLSYDSAALVGALDRARPPGQPNGYAIAALTRPDGFSGVDGVFGLTPDGQTLRDLAIFQIQPGGGGRI VSPAAGRLVRDQRS >Mature_493_residues AASLAGLAACAGPAAGPAGPVTAGPPAPAPTVPAGRTVGVLLPLSGGNARLGQEMLASTRLALGAPTAPPLDIRDTEAAG GAGAAAQAAVAAGDGVILGPLTAAETTQAAAVTASTSIPMLAYTSDLSLGRPGVWALGIAPEQQVERLGDGRAGRGTAAF CRLPARHGAWPGDGQGPTEVCAAQGLATPDVVYHTTSPASITQWLKTLSAYDTRLAAASPVPRRRCRPTCRRSTRWGPGR PLFRRPRQGMGTAPAAPAVPKLGAPPFDALLLADTGLQLASVIDALQAVQAIGPAATGTAAAAQAPAITVDTPPAAAPVA GAAVTGVPAHTPVGALTVPPTVSTQPAVAPPSPPQQASVPVRILGTGLWGAFAGKLGRLEGAWYAAPDPGARQRFIQIFM ARYHHMPTPLSDLSYDSAALVGALDRARPPGQPNGYAIAALTRPDGFSGVDGVFGLTPDGQTLRDLAIFQIQPGGGGRIV SPAAGRLVRDQRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49396; Mature: 49265
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASLAGLAACAGPAAGPAGPVTAGPPAPAPTVPAGRTVGVLLPLSGGNARLGQEMLAST CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH RLALGAPTAPPLDIRDTEAAGGAGAAAQAAVAAGDGVILGPLTAAETTQAAAVTASTSIP HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHEEEEECCCCC MLAYTSDLSLGRPGVWALGIAPEQQVERLGDGRAGRGTAAFCRLPARHGAWPGDGQGPTE EEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCHHEEECCHHCCCCCCCCCCHHH VCAAQGLATPDVVYHTTSPASITQWLKTLSAYDTRLAAASPVPRRRCRPTCRRSTRWGPG HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCCCCCCC RPLFRRPRQGMGTAPAAPAVPKLGAPPFDALLLADTGLQLASVIDALQAVQAIGPAATGT CCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC AAAAQAPAITVDTPPAAAPVAGAAVTGVPAHTPVGALTVPPTVSTQPAVAPPSPPQQASV HHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC PVRILGTGLWGAFAGKLGRLEGAWYAAPDPGARQRFIQIFMARYHHMPTPLSDLSYDSAA CEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHH LVGALDRARPPGQPNGYAIAALTRPDGFSGVDGVFGLTPDGQTLRDLAIFQIQPGGGGRI HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCEE VSPAAGRLVRDQRS ECHHHHHHHHCCCC >Mature Secondary Structure AASLAGLAACAGPAAGPAGPVTAGPPAPAPTVPAGRTVGVLLPLSGGNARLGQEMLAST CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH RLALGAPTAPPLDIRDTEAAGGAGAAAQAAVAAGDGVILGPLTAAETTQAAAVTASTSIP HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHEEEEECCCCC MLAYTSDLSLGRPGVWALGIAPEQQVERLGDGRAGRGTAAFCRLPARHGAWPGDGQGPTE EEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCHHEEECCHHCCCCCCCCCCHHH VCAAQGLATPDVVYHTTSPASITQWLKTLSAYDTRLAAASPVPRRRCRPTCRRSTRWGPG HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCCCCCCC RPLFRRPRQGMGTAPAAPAVPKLGAPPFDALLLADTGLQLASVIDALQAVQAIGPAATGT CCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC AAAAQAPAITVDTPPAAAPVAGAAVTGVPAHTPVGALTVPPTVSTQPAVAPPSPPQQASV HHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC PVRILGTGLWGAFAGKLGRLEGAWYAAPDPGARQRFIQIFMARYHHMPTPLSDLSYDSAA CEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHH LVGALDRARPPGQPNGYAIAALTRPDGFSGVDGVFGLTPDGQTLRDLAIFQIQPGGGGRI HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCEE VSPAAGRLVRDQRS ECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA