| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162148985
Identifier: 162148985
GI number: 162148985
Start: 3307134
End: 3308540
Strand: Reverse
Name: 162148985
Synonym: GDI_3215
Alternate gene names: NA
Gene position: 3308540-3307134 (Counterclockwise)
Preceding gene: 162148986
Following gene: 162148984
Centisome position: 83.88
GC content: 66.24
Gene sequence:
>1407_bases ATGTCAGTGTCCGGCGATTCCCTCCTCGACTCCGTGGCCGATCCCGCATTGGCGTACACCGAAGCCATTTCCGTGGGGGG GCGGTCCGAGCAGTTACTGCGCCGGGCCTGCCTGGCCATCCCGCTCCTGATGGCGGTGATCAGTGCCGTGATCATGCTCG TCCATCGGCACCTGGTCCACACCGGCGTCCCCTTGCCCCATGACGATGTGTGCTTCGCCAATAATATCAATTTCCTGTGG CACCTCCATGAACTGACCAGGTCCGATTCCTGGGGGCCGATGCTGGTCGTGCGCGACTGGCTGGCGGCCCATCCCGGCGG CGATGCCTATGATCACTTCTTCTTCGCGCTGGGGATCAAGTTCCAGTACCCCCTGTCGTCGCTGCTGGCGATCCGCTGGC TACCGTTCGACGGCGACACGGCGATCCAGGTCCTCGACAGTCTCGACATCGCGGCCTGGATCACGGTGGCGGTCGGGATG GTCCTGCTGAACCGGGAACTCGCCAGGCTGGTCCGGTTGCCGGCCGCCCCGGACGGCGGGTCCAGCCGGTTCTGGCTGGC CGCCGCAACCGTGATCGCCACCTTCTGCTTCTTTCCCCTGATCCGGGCCGTCTATCTCGGCCAGATCCAGATCTTTCTCG ACGCCATCTTCGTCTTCGCCTGCTATGCTTTGGTCAGGGGCCGCTCGGCGCCGGCCGGCCTGCTGATCGGCCTTTCCGCC CTGGTGAAGCCGCAGATGGCGCTGTTCCTGATTTGGGGCGCCCTGCGCCGAGACAGGCCGTTCGTCGGGGCGATGGCGGC CTGCCTGGCCGTGGGCTATGCGCTCTCGGCATCGCTGTATGGATGGGCGTGGCCGCTCGCCTATCTGCGGGTCCTGGCGT TTATCGACCGGCGTGGCGAAAGCCTCTACGCCAACCAGTCGGTCAACGGGCTGCTCAACCATATGCTCGGCAATGGGCCG GACCTCGTCTGGGACCGCTGGCGTTTCGCCCCCTACGACCCGCCCGTCCATTACCTGACGCTGCTGTCGATGGTGATGCT GGTCGTGGCCGGCCTGTGGGGGGCGCGGACCGCGACCACCCGACTGTCCGCGGTGGCTTCGCTGATGGTGGCGGCCCTAT GCTTTACGGCGTCCTCGCCGGTGGCGTGGGAACATCATTACGGCATCCTGCTGCCGCTGTTCTCGCTGCTGTTCCTGTCG CTGCCGGCCGATCCGCGCCCTGCCTTCGGGCGATGGAGCCTGCTGTGCGTCACCTTTGCGCTGTCCGCCAATACGTTGTC GCCGGTGAACGTGCTGGCGGCGACACCGTTCGCGTTCCTGCAATCCTACATCTTCTTCGCAGCGCTCGGCGCCCTTGCCC TTGTCTTCCTCTGCCGTCGCGACCTGGGCTGGGCCGCGCGCGTCTGA
Upstream 100 bases:
>100_bases CGTGACCGGTTTGTATCTTTTTGTATCTTTGTGATGAAACCGGGGATCGAGCCTGCGGGTTCAGCGCGTCGGAACACCCT GCTTGTCCCGAGGTCCAGAC
Downstream 100 bases:
>100_bases TTGCGCCGCCGTCTCCCCCGCGCGTTGCGGGCCGATCGCGCTGTCGGCCTGGACGTCCGCCTATCGATGTATGGGGAAGA TCGCAGCCTGACGATTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSVSGDSLLDSVADPALAYTEAISVGGRSEQLLRRACLAIPLLMAVISAVIMLVHRHLVHTGVPLPHDDVCFANNINFLW HLHELTRSDSWGPMLVVRDWLAAHPGGDAYDHFFFALGIKFQYPLSSLLAIRWLPFDGDTAIQVLDSLDIAAWITVAVGM VLLNRELARLVRLPAAPDGGSSRFWLAAATVIATFCFFPLIRAVYLGQIQIFLDAIFVFACYALVRGRSAPAGLLIGLSA LVKPQMALFLIWGALRRDRPFVGAMAACLAVGYALSASLYGWAWPLAYLRVLAFIDRRGESLYANQSVNGLLNHMLGNGP DLVWDRWRFAPYDPPVHYLTLLSMVMLVVAGLWGARTATTRLSAVASLMVAALCFTASSPVAWEHHYGILLPLFSLLFLS LPADPRPAFGRWSLLCVTFALSANTLSPVNVLAATPFAFLQSYIFFAALGALALVFLCRRDLGWAARV
Sequences:
>Translated_468_residues MSVSGDSLLDSVADPALAYTEAISVGGRSEQLLRRACLAIPLLMAVISAVIMLVHRHLVHTGVPLPHDDVCFANNINFLW HLHELTRSDSWGPMLVVRDWLAAHPGGDAYDHFFFALGIKFQYPLSSLLAIRWLPFDGDTAIQVLDSLDIAAWITVAVGM VLLNRELARLVRLPAAPDGGSSRFWLAAATVIATFCFFPLIRAVYLGQIQIFLDAIFVFACYALVRGRSAPAGLLIGLSA LVKPQMALFLIWGALRRDRPFVGAMAACLAVGYALSASLYGWAWPLAYLRVLAFIDRRGESLYANQSVNGLLNHMLGNGP DLVWDRWRFAPYDPPVHYLTLLSMVMLVVAGLWGARTATTRLSAVASLMVAALCFTASSPVAWEHHYGILLPLFSLLFLS LPADPRPAFGRWSLLCVTFALSANTLSPVNVLAATPFAFLQSYIFFAALGALALVFLCRRDLGWAARV >Mature_467_residues SVSGDSLLDSVADPALAYTEAISVGGRSEQLLRRACLAIPLLMAVISAVIMLVHRHLVHTGVPLPHDDVCFANNINFLWH LHELTRSDSWGPMLVVRDWLAAHPGGDAYDHFFFALGIKFQYPLSSLLAIRWLPFDGDTAIQVLDSLDIAAWITVAVGMV LLNRELARLVRLPAAPDGGSSRFWLAAATVIATFCFFPLIRAVYLGQIQIFLDAIFVFACYALVRGRSAPAGLLIGLSAL VKPQMALFLIWGALRRDRPFVGAMAACLAVGYALSASLYGWAWPLAYLRVLAFIDRRGESLYANQSVNGLLNHMLGNGPD LVWDRWRFAPYDPPVHYLTLLSMVMLVVAGLWGARTATTRLSAVASLMVAALCFTASSPVAWEHHYGILLPLFSLLFLSL PADPRPAFGRWSLLCVTFALSANTLSPVNVLAATPFAFLQSYIFFAALGALALVFLCRRDLGWAARV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51185; Mature: 51054
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSGDSLLDSVADPALAYTEAISVGGRSEQLLRRACLAIPLLMAVISAVIMLVHRHLVH CCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVPLPHDDVCFANNINFLWHLHELTRSDSWGPMLVVRDWLAAHPGGDAYDHFFFALGIK CCCCCCCCCCEEECCCHHHEEHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCE FQYPLSSLLAIRWLPFDGDTAIQVLDSLDIAAWITVAVGMVLLNRELARLVRLPAAPDGG ECCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSRFWLAAATVIATFCFFPLIRAVYLGQIQIFLDAIFVFACYALVRGRSAPAGLLIGLSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LVKPQMALFLIWGALRRDRPFVGAMAACLAVGYALSASLYGWAWPLAYLRVLAFIDRRGE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLYANQSVNGLLNHMLGNGPDLVWDRWRFAPYDPPVHYLTLLSMVMLVVAGLWGARTATT CEECCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH RLSAVASLMVAALCFTASSPVAWEHHYGILLPLFSLLFLSLPADPRPAFGRWSLLCVTFA HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LSANTLSPVNVLAATPFAFLQSYIFFAALGALALVFLCRRDLGWAARV HCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SVSGDSLLDSVADPALAYTEAISVGGRSEQLLRRACLAIPLLMAVISAVIMLVHRHLVH CCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVPLPHDDVCFANNINFLWHLHELTRSDSWGPMLVVRDWLAAHPGGDAYDHFFFALGIK CCCCCCCCCCEEECCCHHHEEHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCE FQYPLSSLLAIRWLPFDGDTAIQVLDSLDIAAWITVAVGMVLLNRELARLVRLPAAPDGG ECCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSRFWLAAATVIATFCFFPLIRAVYLGQIQIFLDAIFVFACYALVRGRSAPAGLLIGLSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LVKPQMALFLIWGALRRDRPFVGAMAACLAVGYALSASLYGWAWPLAYLRVLAFIDRRGE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLYANQSVNGLLNHMLGNGPDLVWDRWRFAPYDPPVHYLTLLSMVMLVVAGLWGARTATT CEECCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH RLSAVASLMVAALCFTASSPVAWEHHYGILLPLFSLLFLSLPADPRPAFGRWSLLCVTFA HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LSANTLSPVNVLAATPFAFLQSYIFFAALGALALVFLCRRDLGWAARV HCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA