| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162148984
Identifier: 162148984
GI number: 162148984
Start: 3305616
End: 3306719
Strand: Reverse
Name: 162148984
Synonym: GDI_3214
Alternate gene names: NA
Gene position: 3306719-3305616 (Counterclockwise)
Preceding gene: 162148985
Following gene: 162148977
Centisome position: 83.84
GC content: 69.47
Gene sequence:
>1104_bases ATGGATCAGATGGGCAGTCGATCCGCGTGGGGATTGTCGCGCCGCCGGGTGCTGATCGCAGGGGCGGGCGCGGGGGGCGC GGCCGCGCTGGCGGGCGGGCTGGCGGTGCGCCACCGGCTGCATCATCAGGCGGTCACTCATCACAAGGTGCTGCCCGACG GGCGTTTCCGCCGGCTGGCGCTGTCCTGGCCGTCCTCGAACATGCTGGTCTTCGCGGTGGCGCGGCAGCATTTCTTTGCC GCCTACAATCTGGACGTGGCGCTGGTCGGCGGTGCGCGCAGCGGGCGGGCCGCCATTGCCGACATGGTTGCCGGCCGGGC GGTGGGCGCGGCATCCCCGATCCTGACCTGGCTGGACGTGATGCGGCTGGGGGGAGTCCAGGCTCGTCTGGTCAGCGGCC TGCAATCCGGCACCTTCCGTTTGCTGGTCCGGCGCAAGCTCAAGGTCGTGCGGCTGGACGGCATCGCGGGGCTGCGAATC GCGGTAGAGGACCAGGACATGGCCGACCGGCTGTTCTTCTCGGTCATGATGCGGCGCAAGGGAATCGACCCCGAGGCATC GGTGCGCTGGGTCACCCTGCCACCCGAACAGGTGATGGATGCCGCCCGGGCGGGCGAGATCGACGCCGTGGCCGCGCACG ACCCGCTGGCGTGGCAGTTGCTGCACGGGACGGATTCGCCGTTCTTCGAACTGGCCAACAGCACGACGGGTCATTACGGC GAGCGTGCCAACCTGGCGCTGGGCCTGTCGGATTCGCTGCTGCAGTCCGATCCGGCGGCGGCGGCGGCATTGGTCATGGC CCTGCGCGCGGCGTCGGACTGGATCAAGGCCCATCCCGACCAGGCGGCCAGCCTGATGACGGGGCAGATTCCGGGCATGG AGACCGGCGACATCCTGTCCATGCTGCGGCACGAGACATTGGGCATCAGCCCCGTGGGGAACGACCTGCGGGTGCAGGTG GCGCAATATGTGGATGAAATGAAGCTGCTGGGCCGCGTGCCCGATACGGTCGGATCATCGGCCTATGCCAAGCGGGTCTG CGCCAATGCCCTGGTCACCGATACGCCCGCCGCGCTGTGGCCGCAGGCGGTCGGGCCCACATAG
Upstream 100 bases:
>100_bases TTTGCAGGTAAACCCCCTATCCGATGTTTTTTTTGACGGGTAGGAGAGCAGGTGCCCACCATGGGGCGGCATCAGGAAAC ACGGGGGTCGAAGCGCACGC
Downstream 100 bases:
>100_bases GGCGGGATATTACAGACTATCCGTGGTGCCGTAGCGGACGCGTTTTTCCTTCAGCCATCGGCGATAGGCGACCGAGAGCG AATCCGCCCGGGTCGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Tat Pathway Signal Sequence Domain-Containing Protein; Nitrate Transport Protein NrtA; Lipoprotein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MDQMGSRSAWGLSRRRVLIAGAGAGGAAALAGGLAVRHRLHHQAVTHHKVLPDGRFRRLALSWPSSNMLVFAVARQHFFA AYNLDVALVGGARSGRAAIADMVAGRAVGAASPILTWLDVMRLGGVQARLVSGLQSGTFRLLVRRKLKVVRLDGIAGLRI AVEDQDMADRLFFSVMMRRKGIDPEASVRWVTLPPEQVMDAARAGEIDAVAAHDPLAWQLLHGTDSPFFELANSTTGHYG ERANLALGLSDSLLQSDPAAAAALVMALRAASDWIKAHPDQAASLMTGQIPGMETGDILSMLRHETLGISPVGNDLRVQV AQYVDEMKLLGRVPDTVGSSAYAKRVCANALVTDTPAALWPQAVGPT
Sequences:
>Translated_367_residues MDQMGSRSAWGLSRRRVLIAGAGAGGAAALAGGLAVRHRLHHQAVTHHKVLPDGRFRRLALSWPSSNMLVFAVARQHFFA AYNLDVALVGGARSGRAAIADMVAGRAVGAASPILTWLDVMRLGGVQARLVSGLQSGTFRLLVRRKLKVVRLDGIAGLRI AVEDQDMADRLFFSVMMRRKGIDPEASVRWVTLPPEQVMDAARAGEIDAVAAHDPLAWQLLHGTDSPFFELANSTTGHYG ERANLALGLSDSLLQSDPAAAAALVMALRAASDWIKAHPDQAASLMTGQIPGMETGDILSMLRHETLGISPVGNDLRVQV AQYVDEMKLLGRVPDTVGSSAYAKRVCANALVTDTPAALWPQAVGPT >Mature_367_residues MDQMGSRSAWGLSRRRVLIAGAGAGGAAALAGGLAVRHRLHHQAVTHHKVLPDGRFRRLALSWPSSNMLVFAVARQHFFA AYNLDVALVGGARSGRAAIADMVAGRAVGAASPILTWLDVMRLGGVQARLVSGLQSGTFRLLVRRKLKVVRLDGIAGLRI AVEDQDMADRLFFSVMMRRKGIDPEASVRWVTLPPEQVMDAARAGEIDAVAAHDPLAWQLLHGTDSPFFELANSTTGHYG ERANLALGLSDSLLQSDPAAAAALVMALRAASDWIKAHPDQAASLMTGQIPGMETGDILSMLRHETLGISPVGNDLRVQV AQYVDEMKLLGRVPDTVGSSAYAKRVCANALVTDTPAALWPQAVGPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39092; Mature: 39092
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQMGSRSAWGLSRRRVLIAGAGAGGAAALAGGLAVRHRLHHQAVTHHKVLPDGRFRRLA CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LSWPSSNMLVFAVARQHFFAAYNLDVALVGGARSGRAAIADMVAGRAVGAASPILTWLDV EECCCCCEEEEEEHHHHHHEEECCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH MRLGGVQARLVSGLQSGTFRLLVRRKLKVVRLDGIAGLRIAVEDQDMADRLFFSVMMRRK HHHCCHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHC GIDPEASVRWVTLPPEQVMDAARAGEIDAVAAHDPLAWQLLHGTDSPFFELANSTTGHYG CCCCCCCEEEEECCHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHHHHCCCCCCCC ERANLALGLSDSLLQSDPAAAAALVMALRAASDWIKAHPDQAASLMTGQIPGMETGDILS CCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHH MLRHETLGISPVGNDLRVQVAQYVDEMKLLGRVPDTVGSSAYAKRVCANALVTDTPAALW HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHC PQAVGPT CCCCCCC >Mature Secondary Structure MDQMGSRSAWGLSRRRVLIAGAGAGGAAALAGGLAVRHRLHHQAVTHHKVLPDGRFRRLA CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LSWPSSNMLVFAVARQHFFAAYNLDVALVGGARSGRAAIADMVAGRAVGAASPILTWLDV EECCCCCEEEEEEHHHHHHEEECCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH MRLGGVQARLVSGLQSGTFRLLVRRKLKVVRLDGIAGLRIAVEDQDMADRLFFSVMMRRK HHHCCHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHC GIDPEASVRWVTLPPEQVMDAARAGEIDAVAAHDPLAWQLLHGTDSPFFELANSTTGHYG CCCCCCCEEEEECCHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHHHHCCCCCCCC ERANLALGLSDSLLQSDPAAAAALVMALRAASDWIKAHPDQAASLMTGQIPGMETGDILS CCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHH MLRHETLGISPVGNDLRVQVAQYVDEMKLLGRVPDTVGSSAYAKRVCANALVTDTPAALW HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHC PQAVGPT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA