| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162148979
Identifier: 162148979
GI number: 162148979
Start: 3299972
End: 3301114
Strand: Direct
Name: 162148979
Synonym: GDI_3209
Alternate gene names: NA
Gene position: 3299972-3301114 (Clockwise)
Preceding gene: 162148978
Following gene: 162148980
Centisome position: 83.67
GC content: 69.64
Gene sequence:
>1143_bases ATGACCACGCACGGGCCGCGGGGGCGGCATCCGGCGACGCGACACCATCTGCGACGACATTTCCTGGGGCTGGCGGCCGG CGCGGCGGGCACAGGGCTGCTGCGGCCGCCGGCCCTGCTGGCGCAATCCCGCCCGCCCCTTCTGCCGCCCATCGCCGAGG TCGATGCGCTGGTCGCGTTCGGCCATACCGGTCCGGTTACGGACGGGGGCTGGACGGCGGCGCACGACCAGGGGGTGCAG GCCGTGCGCGCCGCCTTCCCGCGCCTGCGGACCGTGTATGTCGAGAGCATTCCCTATTCCGCCGACGCCACGCGCATCTT CCGCCAGTTCGTGGCCGAGGGCGCGCAGATGGTCATCGCGACCTCGGACTACGGTGATTTCATCCGTGATGTCTCGGACC GCGCGCCCGGCGTCGCCTTCATGGAATGCGACGGGCACAACGTCACCGGCAACCTGGGCTGGTATTACCTGACCCACTGG TATGCCAGCTACGTCATCGGCATCGCCGCCGGGCTGATGACCAGGACGAACCGGCTGGGCTTCGTGGGGTCGTTTCCCAT TCCCTCGGTCTATGCCGGGGCCAACGCCGTGCTGCTGGGCGCGCGCTCGGTCAACCCTGCCGCGACATTGCAGGCGATTT CGATCAACGCCTGGTTCGACCCGCAGGCCGCCACCCAGGCCGGCACCGCGCTGGTCGAAAATGGCTGCGACTTCCTGTGC GGCATCATGGACGACCCCGGATATCTGCGCGTGGCGCAGCAGCGCGGCATCAAGGCGGCGATGTGGAACACCGACATGCG CCAGTACGGGCCCGATGCCTATATCAGCTCGGTGATGCTGGATTTCCGCGCCTATTATGTGGAACAGGTCCGCGCGCGCC TGGCCGGCACCTGGCAGCCGCAGGGGCATTTCCTGACGCTGGGCCAGGGCGTGGACCGCGACGCCTGGGGGCGGACCGTC CCGCCCGCCGTCGCCGCCCAGGCCGATGCGATGCGCGCGCGGATCATGGCGGGGTACAACCCGTTCCGCGGCCCGATCCG CGATGCCGCCGGACGGCTGCGCGTGCCGGCCGGCACGGTGATGGACGATGCGCTGATCTATCAGTGGGACTGGTCGGTGG AAGGAGTCAGCGGCCTTGACTGA
Upstream 100 bases:
>100_bases AGGGGGGGATCGACCATACCGGGGGAACGCCCGGCGCCGGGTGGGACCGGCCCGGGCATCGAGTGGGGGAAGACGAAGAC ATGACCGTTCCAGGTCAGGT
Downstream 100 bases:
>100_bases CTCCCTGCTTGCCGACGGACCGCCGCCGGTCGCGCCCGGCACACCGCCGATCCTGCAATTGCAGGGCATTTCCAAGTATT TTCCCGGCGTGATCGCGAAC
Product: lipoprotein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Protein Family Protein; Surface Lipoprotein; Signal Peptide Protein; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTTHGPRGRHPATRHHLRRHFLGLAAGAAGTGLLRPPALLAQSRPPLLPPIAEVDALVAFGHTGPVTDGGWTAAHDQGVQ AVRAAFPRLRTVYVESIPYSADATRIFRQFVAEGAQMVIATSDYGDFIRDVSDRAPGVAFMECDGHNVTGNLGWYYLTHW YASYVIGIAAGLMTRTNRLGFVGSFPIPSVYAGANAVLLGARSVNPAATLQAISINAWFDPQAATQAGTALVENGCDFLC GIMDDPGYLRVAQQRGIKAAMWNTDMRQYGPDAYISSVMLDFRAYYVEQVRARLAGTWQPQGHFLTLGQGVDRDAWGRTV PPAVAAQADAMRARIMAGYNPFRGPIRDAAGRLRVPAGTVMDDALIYQWDWSVEGVSGLD
Sequences:
>Translated_380_residues MTTHGPRGRHPATRHHLRRHFLGLAAGAAGTGLLRPPALLAQSRPPLLPPIAEVDALVAFGHTGPVTDGGWTAAHDQGVQ AVRAAFPRLRTVYVESIPYSADATRIFRQFVAEGAQMVIATSDYGDFIRDVSDRAPGVAFMECDGHNVTGNLGWYYLTHW YASYVIGIAAGLMTRTNRLGFVGSFPIPSVYAGANAVLLGARSVNPAATLQAISINAWFDPQAATQAGTALVENGCDFLC GIMDDPGYLRVAQQRGIKAAMWNTDMRQYGPDAYISSVMLDFRAYYVEQVRARLAGTWQPQGHFLTLGQGVDRDAWGRTV PPAVAAQADAMRARIMAGYNPFRGPIRDAAGRLRVPAGTVMDDALIYQWDWSVEGVSGLD >Mature_379_residues TTHGPRGRHPATRHHLRRHFLGLAAGAAGTGLLRPPALLAQSRPPLLPPIAEVDALVAFGHTGPVTDGGWTAAHDQGVQA VRAAFPRLRTVYVESIPYSADATRIFRQFVAEGAQMVIATSDYGDFIRDVSDRAPGVAFMECDGHNVTGNLGWYYLTHWY ASYVIGIAAGLMTRTNRLGFVGSFPIPSVYAGANAVLLGARSVNPAATLQAISINAWFDPQAATQAGTALVENGCDFLCG IMDDPGYLRVAQQRGIKAAMWNTDMRQYGPDAYISSVMLDFRAYYVEQVRARLAGTWQPQGHFLTLGQGVDRDAWGRTVP PAVAAQADAMRARIMAGYNPFRGPIRDAAGRLRVPAGTVMDDALIYQWDWSVEGVSGLD
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41058; Mature: 40927
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHGPRGRHPATRHHLRRHFLGLAAGAAGTGLLRPPALLAQSRPPLLPPIAEVDALVAF CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHEEE GHTGPVTDGGWTAAHDQGVQAVRAAFPRLRTVYVESIPYSADATRIFRQFVAEGAQMVIA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCEEEEE TSDYGDFIRDVSDRAPGVAFMECDGHNVTGNLGWYYLTHWYASYVIGIAAGLMTRTNRLG ECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC FVGSFPIPSVYAGANAVLLGARSVNPAATLQAISINAWFDPQAATQAGTALVENGCDFLC EEECCCCCCHHCCCCEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCEEE GIMDDPGYLRVAQQRGIKAAMWNTDMRQYGPDAYISSVMLDFRAYYVEQVRARLAGTWQP EECCCCCCEEHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QGHFLTLGQGVDRDAWGRTVPPAVAAQADAMRARIMAGYNPFRGPIRDAAGRLRVPAGTV CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEECCCCCC MDDALIYQWDWSVEGVSGLD CCCCEEEEECCCCCCCCCCC >Mature Secondary Structure TTHGPRGRHPATRHHLRRHFLGLAAGAAGTGLLRPPALLAQSRPPLLPPIAEVDALVAF CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHEEE GHTGPVTDGGWTAAHDQGVQAVRAAFPRLRTVYVESIPYSADATRIFRQFVAEGAQMVIA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCEEEEE TSDYGDFIRDVSDRAPGVAFMECDGHNVTGNLGWYYLTHWYASYVIGIAAGLMTRTNRLG ECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC FVGSFPIPSVYAGANAVLLGARSVNPAATLQAISINAWFDPQAATQAGTALVENGCDFLC EEECCCCCCHHCCCCEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCEEE GIMDDPGYLRVAQQRGIKAAMWNTDMRQYGPDAYISSVMLDFRAYYVEQVRARLAGTWQP EECCCCCCEEHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QGHFLTLGQGVDRDAWGRTVPPAVAAQADAMRARIMAGYNPFRGPIRDAAGRLRVPAGTV CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEECCCCCC MDDALIYQWDWSVEGVSGLD CCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA