| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is manB [H]
Identifier: 162148911
GI number: 162148911
Start: 3229895
End: 3231367
Strand: Direct
Name: manB [H]
Synonym: GDI_3141
Alternate gene names: 162148911
Gene position: 3229895-3231367 (Clockwise)
Preceding gene: 162148910
Following gene: 162148912
Centisome position: 81.89
GC content: 69.99
Gene sequence:
>1473_bases ATGAAAATAGCCCAGTGGATGACGCAGTCGGGCGTCGCGTTCGGCACCAGCGGCGCGCGCGGCCTCGTCACCGCCATGAC GGATGCGGTCTGCTTCGCCTACACCGTGGGTTATCTGAAGCATCTGGCGACCCTGGGCGAATTTTCCCCCGGCACCCCGG TCGCCGTCGCGGGCGACCTGCGTCCCAGCACGCCCCGCATCGTCCGCGCCTGCGTCGCCGCGATCCGCTCCATGCGGGGC GAGCCGGTATTCTGCGGCTTCGTTCCCACGCCCGCGCTGTGCGTGCATGCCTTTGCGCGCGGCATTCCCTCGCTGATGGT CACGGGCAGCCATATCCCGGCCGACCGCAACGGCATCAAGTTCAACCGCGCGCATGGCGAATTCCTCAAGACCGACGAGG CCGCGATGCGGGAACAGGATGTCGAACTGCCCGAAGGCTGGTTCGATGCCGACGGCGCGCTCGCGATTGCCGCCGACCTG CCCGCGATCACCGACGTGGTTCCCCCCTTCGTCGCCCGCTACCGCGATTTCTTCGGCCCGGACGCCCTGTCGGGCCTGAC GCTGGGCGTGTACCAGCATTCCGCCGTCGGCCGCGACGTGCTGGTGGACATCGTCGAGGCGCTGGGCGGCAAGGCCGTGC CGCTGGGGCGGATGGACAGTTTCATCCCCGTCGATACCGAGGCCGTGCGCCCCGAGGATGCCGCCCTGGCCCGCGACTGG GCCGCCGCCGGCACGCTGGACGCCATCCTGACCACCGATGGCGATTCCGACCGGCCGCTGCTGGCCGACCGCGCCGGGAA CTGGCTGCGCGGCGACGTGCTGGGCATCCTGGCCGCACGCTTCCTGAACGCGGCCGCCGTGACCACGCCCGTCAGCAGCA ACACGGCGCTGGAACTGTCCGGCTTCGCGAAAGAGGTCCGCCGCACCCGTATCGGTTCCCCCTTCGTCGTGGCCGCGATG ACCGAGGCCGCCGAGGCCGGGCTCGTGCCCTCGGTGGGCTACGAAGCCAATGGCGGGTTCCTGCTGGCCAGCGACGTGAC GCGCTACGGCCGTACGCTTGCCGCCCTGCCGACGCGCGATTCCGTCCTGCCCATGATCTGCGCGCTGGTCGCCGCCCGCG AGCAGGGCCGCGATCTCGATGCCCTGGTCGCCACCCTGCCCCCGCGCTTCACCCTCAGCGACCGCCTGGTCGAAATGCCG ACGGCGCAGAGCCAGGCGCAGATAGCGAAACTCGGCGAGGACCCCGAAGGCGGCGCGGCGGCGCTGGGCTTCACCGAAGC ATGCGGCCCCCTCCATCACGTGGACAAGACCGACGGCCTGCGGATGATTTTCGCCAATGGCGAGATCATCCACCTCCGCC CTTCTGGCAATGCACCGGAACTGCGCGTCTACGTCGAAGCCGACAGCCCCGAACGGGCCGATGAACTGCTGAAGACCGGA CTGGCCGCCGTCAGCACGTGGCGGCAAGGCTGA
Upstream 100 bases:
>100_bases AGTTCACGCTTGCGCCCGGGATGGAAGTCCTGCTGATTTAGCGCACGAAAAACGGAACGGACGCCCGTTCGAACGGCGTC GCAACGGCGGGAAAGACCTC
Downstream 100 bases:
>100_bases AGCCCCCACCAGCGATCCGGACGGCATATCCGGTCCGGATCACGACTTCAGGAGCGCGCAAAAGAGTATCAGCGGCCAGA GGAAAACGACCTAGACGCCC
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKIAQWMTQSGVAFGTSGARGLVTAMTDAVCFAYTVGYLKHLATLGEFSPGTPVAVAGDLRPSTPRIVRACVAAIRSMRG EPVFCGFVPTPALCVHAFARGIPSLMVTGSHIPADRNGIKFNRAHGEFLKTDEAAMREQDVELPEGWFDADGALAIAADL PAITDVVPPFVARYRDFFGPDALSGLTLGVYQHSAVGRDVLVDIVEALGGKAVPLGRMDSFIPVDTEAVRPEDAALARDW AAAGTLDAILTTDGDSDRPLLADRAGNWLRGDVLGILAARFLNAAAVTTPVSSNTALELSGFAKEVRRTRIGSPFVVAAM TEAAEAGLVPSVGYEANGGFLLASDVTRYGRTLAALPTRDSVLPMICALVAAREQGRDLDALVATLPPRFTLSDRLVEMP TAQSQAQIAKLGEDPEGGAAALGFTEACGPLHHVDKTDGLRMIFANGEIIHLRPSGNAPELRVYVEADSPERADELLKTG LAAVSTWRQG
Sequences:
>Translated_490_residues MKIAQWMTQSGVAFGTSGARGLVTAMTDAVCFAYTVGYLKHLATLGEFSPGTPVAVAGDLRPSTPRIVRACVAAIRSMRG EPVFCGFVPTPALCVHAFARGIPSLMVTGSHIPADRNGIKFNRAHGEFLKTDEAAMREQDVELPEGWFDADGALAIAADL PAITDVVPPFVARYRDFFGPDALSGLTLGVYQHSAVGRDVLVDIVEALGGKAVPLGRMDSFIPVDTEAVRPEDAALARDW AAAGTLDAILTTDGDSDRPLLADRAGNWLRGDVLGILAARFLNAAAVTTPVSSNTALELSGFAKEVRRTRIGSPFVVAAM TEAAEAGLVPSVGYEANGGFLLASDVTRYGRTLAALPTRDSVLPMICALVAAREQGRDLDALVATLPPRFTLSDRLVEMP TAQSQAQIAKLGEDPEGGAAALGFTEACGPLHHVDKTDGLRMIFANGEIIHLRPSGNAPELRVYVEADSPERADELLKTG LAAVSTWRQG >Mature_490_residues MKIAQWMTQSGVAFGTSGARGLVTAMTDAVCFAYTVGYLKHLATLGEFSPGTPVAVAGDLRPSTPRIVRACVAAIRSMRG EPVFCGFVPTPALCVHAFARGIPSLMVTGSHIPADRNGIKFNRAHGEFLKTDEAAMREQDVELPEGWFDADGALAIAADL PAITDVVPPFVARYRDFFGPDALSGLTLGVYQHSAVGRDVLVDIVEALGGKAVPLGRMDSFIPVDTEAVRPEDAALARDW AAAGTLDAILTTDGDSDRPLLADRAGNWLRGDVLGILAARFLNAAAVTTPVSSNTALELSGFAKEVRRTRIGSPFVVAAM TEAAEAGLVPSVGYEANGGFLLASDVTRYGRTLAALPTRDSVLPMICALVAAREQGRDLDALVATLPPRFTLSDRLVEMP TAQSQAQIAKLGEDPEGGAAALGFTEACGPLHHVDKTDGLRMIFANGEIIHLRPSGNAPELRVYVEADSPERADELLKTG LAAVSTWRQG
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group C2 O antigen [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 51685; Mature: 51685
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAQWMTQSGVAFGTSGARGLVTAMTDAVCFAYTVGYLKHLATLGEFSPGTPVAVAGDL CCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC RPSTPRIVRACVAAIRSMRGEPVFCGFVPTPALCVHAFARGIPSLMVTGSHIPADRNGIK CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCE FNRAHGEFLKTDEAAMREQDVELPEGWFDADGALAIAADLPAITDVVPPFVARYRDFFGP EECCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC DALSGLTLGVYQHSAVGRDVLVDIVEALGGKAVPLGRMDSFIPVDTEAVRPEDAALARDW CHHCCCEEEHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHH AAAGTLDAILTTDGDSDRPLLADRAGNWLRGDVLGILAARFLNAAAVTTPVSSNTALELS HHCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHH GFAKEVRRTRIGSPFVVAAMTEAAEAGLVPSVGYEANGGFLLASDVTRYGRTLAALPTRD HHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCEEEECCCCC SVLPMICALVAAREQGRDLDALVATLPPRFTLSDRLVEMPTAQSQAQIAKLGEDPEGGAA CHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCEE ALGFTEACGPLHHVDKTDGLRMIFANGEIIHLRPSGNAPELRVYVEADSPERADELLKTG ECCHHHHCCCHHCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHH LAAVSTWRQG HHHHHHHCCC >Mature Secondary Structure MKIAQWMTQSGVAFGTSGARGLVTAMTDAVCFAYTVGYLKHLATLGEFSPGTPVAVAGDL CCHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC RPSTPRIVRACVAAIRSMRGEPVFCGFVPTPALCVHAFARGIPSLMVTGSHIPADRNGIK CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCE FNRAHGEFLKTDEAAMREQDVELPEGWFDADGALAIAADLPAITDVVPPFVARYRDFFGP EECCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC DALSGLTLGVYQHSAVGRDVLVDIVEALGGKAVPLGRMDSFIPVDTEAVRPEDAALARDW CHHCCCEEEHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHH AAAGTLDAILTTDGDSDRPLLADRAGNWLRGDVLGILAARFLNAAAVTTPVSSNTALELS HHCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHH GFAKEVRRTRIGSPFVVAAMTEAAEAGLVPSVGYEANGGFLLASDVTRYGRTLAALPTRD HHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCEEEECCCCC SVLPMICALVAAREQGRDLDALVATLPPRFTLSDRLVEMPTAQSQAQIAKLGEDPEGGAA CHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCEE ALGFTEACGPLHHVDKTDGLRMIFANGEIIHLRPSGNAPELRVYVEADSPERADELLKTG ECCHHHHCCCHHCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHH LAAVSTWRQG HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379320 [H]