Click here to switch to the map view.

The map label for this gene is bchE [H]

Identifier: 162148901

GI number: 162148901

Start: 3220519

End: 3222027

Strand: Direct

Name: bchE [H]

Synonym: GDI_3131

Alternate gene names: 162148901

Gene position: 3220519-3222027 (Clockwise)

Preceding gene: 162148898

Following gene: 162148902

Centisome position: 81.65

GC content: 64.35

Gene sequence:

>1509_bases
ATGTATACGAAGATCTTCCTTCGCCTGGAACCACTGGGGCTGGAACTGATCGCGGGCGCCGCGCGCGATGCCGGACACAC
GGTGCAGATTATCGACCTGCAGGTGGAAACCCATCAGGATTACTGGCGGATGATCCAGGAATTCCGCCCCCACGCCGTCT
GTTTTTCCGGCAGTTACCTGGCCAACATCCCGGAAATCGTCGATCTGTGCCGCGAGACCCGGGCCCGGATGCCGGGGGTC
TTCCTGTTCGTCGGCGGCCATTCGGTGTCGTTCATCGCCCGCGACGTGCTGGCCCTGGCCGATGGCGCGATCGACTGCGT
CCTGCGGGGTGAAGGCGACGCCACGGTGGGTCAGTTGCTCGACACGCGCCAGGCGGGCGGGGACATCACCACGGTGCCCG
GCGTCGTGACCCTGACGGCCGAGGGGCCGCCGCCGACCTTCGTGAAATCGCTGGACATGATCCGCCCGGCGCGGGACCTG
CTGCGCCACCGGGGGAAATACTTCATCGGCACGCTGGACCCGGCGGCCTCGATCGAATTCGCGCGCGGCTGTCCGTGGGA
CTGCACGTTCTGCAGCGCCTGGACCTTCTACGGACGGTCCTACCGCACTGCCAGCCCGACCGTCATCGCGGACGAACTGG
AAGCGATCCGCGAACCCGGCATCTTCATCGTCGACGACGTGGCCTTCGTCCATGCCGAGCATGGGATGGCGATCGGCGAG
GAAATCAAGCGGCGCGGCATCCGCAAGGAATATTACCTGGAAACCCGCGCCGACGTGCTGCTGCGCAACAAGGAGGTCTT
CCGCTTCTGGAAGGAACTCGGGCTCAGCTACATCTTCATCGGCATGGAGGCGGTGGACGAGGAAGGGCTGAAGCAGTTCC
GCAAGCGCGTGTCGCTGGACCGGAATTTCGAGGCGCTGGAATTCGCGCGTTCGCTGGGCCTGATCGTCGCGATCAACATC
ATCGCCGATCCGGCCTGGGACCGGAAGCGCTTCGAGGTCATCCGGCAATGGTGCCTGGAAATCCCCGATATCGTGAACAT
CTCGGTCATGACCCCCTATCCGGGCACCGAGATCTGGCAGAGCGAGGCCCGACGCCTGACGACGCGCGATTACCGCCTGT
TCGACATCCAGCATGCGGTGCTGCCGACCACCCTGCCGCTGGAGGAATTCTACGAGGAACTGGTCAAGACCCAGCAGGTG
CTGAACCAGAAGCATCTGGGCTGGAGCGCGATCAAGGACACGATGGGCATCGCCCTGCGCCTGGCCCTGCATGGACAGAC
CAATTTCCTGCGGATGATCTGGAAATTCAATTCGGTCTTCAATCCCAAGCTGCAGCTGGCGGACCATCGCCGCACGCCGC
GCTATGAAATGCCGCCCCAGCCCGAGGCGGCGGAGAAGGTCGATCGCCGGACGCTGTACGTCCATAACCCCGCCGGCCGG
CGCAGCCGCACGATCGACGACGCGACCGAGAAGTTCGTCGAGGAAACGCGCATGACGGCGGCCGAATAG

Upstream 100 bases:

>100_bases
CCACCGAATGCATGACCGCCCCATATCGCTCCGCCGCATTGCGGCCAGAAAGATCAAGGTGACAGCATTGAGAGTACTTG
CCGTCCATCCCAGCGCCCTG

Downstream 100 bases:

>100_bases
AAGGCAGCCGCCGCCGCTCGGTTGACGGCAGCCTGCCCCGACCCCACCTTCCGCACGGGGTCCTGCGTGCCAGCGGGATC
GCGGAACGGAAGGCGGCGTC

Product: cobalamin binding protein

Products: NA

Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MYTKIFLRLEPLGLELIAGAARDAGHTVQIIDLQVETHQDYWRMIQEFRPHAVCFSGSYLANIPEIVDLCRETRARMPGV
FLFVGGHSVSFIARDVLALADGAIDCVLRGEGDATVGQLLDTRQAGGDITTVPGVVTLTAEGPPPTFVKSLDMIRPARDL
LRHRGKYFIGTLDPAASIEFARGCPWDCTFCSAWTFYGRSYRTASPTVIADELEAIREPGIFIVDDVAFVHAEHGMAIGE
EIKRRGIRKEYYLETRADVLLRNKEVFRFWKELGLSYIFIGMEAVDEEGLKQFRKRVSLDRNFEALEFARSLGLIVAINI
IADPAWDRKRFEVIRQWCLEIPDIVNISVMTPYPGTEIWQSEARRLTTRDYRLFDIQHAVLPTTLPLEEFYEELVKTQQV
LNQKHLGWSAIKDTMGIALRLALHGQTNFLRMIWKFNSVFNPKLQLADHRRTPRYEMPPQPEAAEKVDRRTLYVHNPAGR
RSRTIDDATEKFVEETRMTAAE

Sequences:

>Translated_502_residues
MYTKIFLRLEPLGLELIAGAARDAGHTVQIIDLQVETHQDYWRMIQEFRPHAVCFSGSYLANIPEIVDLCRETRARMPGV
FLFVGGHSVSFIARDVLALADGAIDCVLRGEGDATVGQLLDTRQAGGDITTVPGVVTLTAEGPPPTFVKSLDMIRPARDL
LRHRGKYFIGTLDPAASIEFARGCPWDCTFCSAWTFYGRSYRTASPTVIADELEAIREPGIFIVDDVAFVHAEHGMAIGE
EIKRRGIRKEYYLETRADVLLRNKEVFRFWKELGLSYIFIGMEAVDEEGLKQFRKRVSLDRNFEALEFARSLGLIVAINI
IADPAWDRKRFEVIRQWCLEIPDIVNISVMTPYPGTEIWQSEARRLTTRDYRLFDIQHAVLPTTLPLEEFYEELVKTQQV
LNQKHLGWSAIKDTMGIALRLALHGQTNFLRMIWKFNSVFNPKLQLADHRRTPRYEMPPQPEAAEKVDRRTLYVHNPAGR
RSRTIDDATEKFVEETRMTAAE
>Mature_502_residues
MYTKIFLRLEPLGLELIAGAARDAGHTVQIIDLQVETHQDYWRMIQEFRPHAVCFSGSYLANIPEIVDLCRETRARMPGV
FLFVGGHSVSFIARDVLALADGAIDCVLRGEGDATVGQLLDTRQAGGDITTVPGVVTLTAEGPPPTFVKSLDMIRPARDL
LRHRGKYFIGTLDPAASIEFARGCPWDCTFCSAWTFYGRSYRTASPTVIADELEAIREPGIFIVDDVAFVHAEHGMAIGE
EIKRRGIRKEYYLETRADVLLRNKEVFRFWKELGLSYIFIGMEAVDEEGLKQFRKRVSLDRNFEALEFARSLGLIVAINI
IADPAWDRKRFEVIRQWCLEIPDIVNISVMTPYPGTEIWQSEARRLTTRDYRLFDIQHAVLPTTLPLEEFYEELVKTQQV
LNQKHLGWSAIKDTMGIALRLALHGQTNFLRMIWKFNSVFNPKLQLADHRRTPRYEMPPQPEAAEKVDRRTLYVHNPAGR
RSRTIDDATEKFVEETRMTAAE

Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011772
- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 57307; Mature: 57307

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTKIFLRLEPLGLELIAGAARDAGHTVQIIDLQVETHQDYWRMIQEFRPHAVCFSGSYL
CCEEEEEEEECCCHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCEEEECCCHH
ANIPEIVDLCRETRARMPGVFLFVGGHSVSFIARDVLALADGAIDCVLRGEGDATVGQLL
HCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
DTRQAGGDITTVPGVVTLTAEGPPPTFVKSLDMIRPARDLLRHRGKYFIGTLDPAASIEF
HHHHCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH
ARGCPWDCTFCSAWTFYGRSYRTASPTVIADELEAIREPGIFIVDDVAFVHAEHGMAIGE
CCCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCEEEECHHEEEHHCCCHHHH
EIKRRGIRKEYYLETRADVLLRNKEVFRFWKELGLSYIFIGMEAVDEEGLKQFRKRVSLD
HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEHHHHCHHHHHHHHHHCCCC
RNFEALEFARSLGLIVAINIIADPAWDRKRFEVIRQWCLEIPDIVNISVMTPYPGTEIWQ
CCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
SEARRLTTRDYRLFDIQHAVLPTTLPLEEFYEELVKTQQVLNQKHLGWSAIKDTMGIALR
HHHHHHHCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEE
LALHGQTNFLRMIWKFNSVFNPKLQLADHRRTPRYEMPPQPEAAEKVDRRTLYVHNPAGR
EEECCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCC
RSRTIDDATEKFVEETRMTAAE
CCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYTKIFLRLEPLGLELIAGAARDAGHTVQIIDLQVETHQDYWRMIQEFRPHAVCFSGSYL
CCEEEEEEEECCCHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCEEEECCCHH
ANIPEIVDLCRETRARMPGVFLFVGGHSVSFIARDVLALADGAIDCVLRGEGDATVGQLL
HCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
DTRQAGGDITTVPGVVTLTAEGPPPTFVKSLDMIRPARDLLRHRGKYFIGTLDPAASIEF
HHHHCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH
ARGCPWDCTFCSAWTFYGRSYRTASPTVIADELEAIREPGIFIVDDVAFVHAEHGMAIGE
CCCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCEEEECHHEEEHHCCCHHHH
EIKRRGIRKEYYLETRADVLLRNKEVFRFWKELGLSYIFIGMEAVDEEGLKQFRKRVSLD
HHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEHHHHCHHHHHHHHHHCCCC
RNFEALEFARSLGLIVAINIIADPAWDRKRFEVIRQWCLEIPDIVNISVMTPYPGTEIWQ
CCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
SEARRLTTRDYRLFDIQHAVLPTTLPLEEFYEELVKTQQVLNQKHLGWSAIKDTMGIALR
HHHHHHHCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEE
LALHGQTNFLRMIWKFNSVFNPKLQLADHRRTPRYEMPPQPEAAEKVDRRTLYVHNPAGR
EEECCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCC
RSRTIDDATEKFVEETRMTAAE
CCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8385667; 2203738; 10841582 [H]