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The map label for this gene is 162148898

Identifier: 162148898

GI number: 162148898

Start: 3219097

End: 3219657

Strand: Direct

Name: 162148898

Synonym: GDI_3128

Alternate gene names: NA

Gene position: 3219097-3219657 (Clockwise)

Preceding gene: 162148893

Following gene: 162148901

Centisome position: 81.62

GC content: 59.89

Gene sequence:

>561_bases
TTGCTTGCTGGCAGTCCACATTATCCGGCCCTGGTTCTGAATGCCGATTTCAGGCCGCTTTCCTACTTTCCACTGTCGCT
GTGGTCCTGGCAGGACGCGATCAAGGCGGTGTTCCTGGACCGCGTTTCGGTCCTGAGCGAATATGACGAGGAAGTACGGT
CCCCCAGCCGGTCTCTCCGATTACCCAGCGTCATCGCCCTGAAGGATTATATCCCGACCGCCCGCCGCCCCGCCTTTACC
CGGTTCAACGTTTTCCTCCGCGACAATTTTTCCTGCCAATATTGCCTGGACCGCCTGCCGACCCACGACCTGACGTTCGA
TCACGTCATCCCACGCTGCAAGGGGGGCCGGACGACCTGGGAAAATGTCGTCACCGCGTGCAGCCCCTGCAACCTGATGA
AGGGCTCGCGCATGCCGCACGAGTTGAAGATGTATCCCCGCCGCACGCCCTCGCAGCCTTCCACCTGGGAATTGCAGGAA
AACGGCCGCTCGTTCCCTCCCAACTATCTGCATGAAAGCTGGCGGGACTATCTGTACTGGGACAGCGAACTGGATACCTG
A

Upstream 100 bases:

>100_bases
ATATAGATGGCAGGTTCTCAACGGCGCATATCATTCGGCGTTCGGTTATTGAGTACAACGCCTGATGATGGTGTGGCGGC
ATCGCGAAAGGATGCGCCCC

Downstream 100 bases:

>100_bases
CCGGCAGGTCAGCGGTTGCTTCGCCGGCGGCAGTGCCTATCGGTGGTAGCTGTAGCCGTATTCATCCGCCAGCCGCTGCA
GGTCCGGCGCGCCGCGCAGG

Product: endonuclease protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Restriction Endonuclease; Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLAGSPHYPALVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVLSEYDEEVRSPSRSLRLPSVIALKDYIPTARRPAFT
RFNVFLRDNFSCQYCLDRLPTHDLTFDHVIPRCKGGRTTWENVVTACSPCNLMKGSRMPHELKMYPRRTPSQPSTWELQE
NGRSFPPNYLHESWRDYLYWDSELDT

Sequences:

>Translated_186_residues
MLAGSPHYPALVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVLSEYDEEVRSPSRSLRLPSVIALKDYIPTARRPAFT
RFNVFLRDNFSCQYCLDRLPTHDLTFDHVIPRCKGGRTTWENVVTACSPCNLMKGSRMPHELKMYPRRTPSQPSTWELQE
NGRSFPPNYLHESWRDYLYWDSELDT
>Mature_186_residues
MLAGSPHYPALVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVLSEYDEEVRSPSRSLRLPSVIALKDYIPTARRPAFT
RFNVFLRDNFSCQYCLDRLPTHDLTFDHVIPRCKGGRTTWENVVTACSPCNLMKGSRMPHELKMYPRRTPSQPSTWELQE
NGRSFPPNYLHESWRDYLYWDSELDT

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21780; Mature: 21780

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGSPHYPALVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVLSEYDEEVRSPSRSLR
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
LPSVIALKDYIPTARRPAFTRFNVFLRDNFSCQYCLDRLPTHDLTFDHVIPRCKGGRTTW
CCHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCH
ENVVTACSPCNLMKGSRMPHELKMYPRRTPSQPSTWELQENGRSFPPNYLHESWRDYLYW
HHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEHHCCCCCCCHHHHHHHHHHHEEC
DSELDT
CCCCCC
>Mature Secondary Structure
MLAGSPHYPALVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVLSEYDEEVRSPSRSLR
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
LPSVIALKDYIPTARRPAFTRFNVFLRDNFSCQYCLDRLPTHDLTFDHVIPRCKGGRTTW
CCHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCH
ENVVTACSPCNLMKGSRMPHELKMYPRRTPSQPSTWELQENGRSFPPNYLHESWRDYLYW
HHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEHHCCCCCCCHHHHHHHHHHHEEC
DSELDT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA