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The map label for this gene is nouC [H]

Identifier: 162148809

GI number: 162148809

Start: 3129961

End: 3130602

Strand: Reverse

Name: nouC [H]

Synonym: GDI_3038

Alternate gene names: 162148809

Gene position: 3130602-3129961 (Counterclockwise)

Preceding gene: 162148810

Following gene: 162148808

Centisome position: 79.37

GC content: 64.64

Gene sequence:

>642_bases
ATGGCCCGGACGACCCGGGCATTCGGGGCCCTGGGGTCCCTGGCGTTCGCACTCTCCACCTCGGTGCCGGGCATCCAGTC
CGCGGCGATCGAAGGGGGCGAGCTGGTCGTGCGCACCGGACGCGACAACCTGATCGCGCTGATGGGCATGCTGCGCGACG
ATCCACGCTATGCGTGCGAGCAGCTCATGGATCTGTGCGGGGTGGATTATCCGGCGCGGACCGAGCGTTTCGACGTCGTC
TACAACCTGCTGTCGGTGACGCTGAACCATCGGATTCGGGTCATCGTCACGACCGACGAGACGAATCCGGTGCCGTCCGT
CCATCATCTGTGGCCCGCGGCGACGTGGTGGGAACGCGAATGCTACGACCTGTTCGGGGTCCTGTTCTCGGGCCAGCCGG
ACCTGCGCCGTATCCTGACCGATTACGGTTTCGAAGGGCATCCGCTGCGCAAGGATTTCCCGCTGACCGGCTATGTCGAG
GTGCGGTACGACGAAGACCGGCGCGAGGTGGTCTACGAGCCGGTCAAACTGACGCAGGATTTCCGCAATTTCGATTTCGA
ATCGCCCTGGGAAGGTATCCTGACCCTGCCGGGCGACGAGAAGGCGCATGAAACCCGCCAGGGGCTGAAGCTGCCGCGAT
GA

Upstream 100 bases:

>100_bases
CCGCCGACGGCCGAGGCCCTGATCTACGGCATCTTTCAACTGCAGAAGAAAATTCGCAGGACAGGGACGATTCTCCGTGG
CTGACACCGGAACGGATCTG

Downstream 100 bases:

>100_bases
CCGGGACATGCATGCGCAAGGTGAGGGGAGGCGGACGATGAGCGACATTGTCCTTCATGAGGATATTCCGGAATCCCTGC
TGCCCGGTGGCGAGGCCGCG

Product: NADH-quinone oxidoreductase subunit C

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MARTTRAFGALGSLAFALSTSVPGIQSAAIEGGELVVRTGRDNLIALMGMLRDDPRYACEQLMDLCGVDYPARTERFDVV
YNLLSVTLNHRIRVIVTTDETNPVPSVHHLWPAATWWERECYDLFGVLFSGQPDLRRILTDYGFEGHPLRKDFPLTGYVE
VRYDEDRREVVYEPVKLTQDFRNFDFESPWEGILTLPGDEKAHETRQGLKLPR

Sequences:

>Translated_213_residues
MARTTRAFGALGSLAFALSTSVPGIQSAAIEGGELVVRTGRDNLIALMGMLRDDPRYACEQLMDLCGVDYPARTERFDVV
YNLLSVTLNHRIRVIVTTDETNPVPSVHHLWPAATWWERECYDLFGVLFSGQPDLRRILTDYGFEGHPLRKDFPLTGYVE
VRYDEDRREVVYEPVKLTQDFRNFDFESPWEGILTLPGDEKAHETRQGLKLPR
>Mature_212_residues
ARTTRAFGALGSLAFALSTSVPGIQSAAIEGGELVVRTGRDNLIALMGMLRDDPRYACEQLMDLCGVDYPARTERFDVVY
NLLSVTLNHRIRVIVTTDETNPVPSVHHLWPAATWWERECYDLFGVLFSGQPDLRRILTDYGFEGHPLRKDFPLTGYVEV
RYDEDRREVVYEPVKLTQDFRNFDFESPWEGILTLPGDEKAHETRQGLKLPR

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI4758788, Length=161, Percent_Identity=54.6583850931677, Blast_Score=187, Evalue=8e-48,
Organism=Escherichia coli, GI145693162, Length=168, Percent_Identity=34.5238095238095, Blast_Score=90, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71990788, Length=177, Percent_Identity=46.3276836158192, Blast_Score=166, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI32563621, Length=177, Percent_Identity=46.3276836158192, Blast_Score=166, Evalue=7e-42,
Organism=Drosophila melanogaster, GI24656494, Length=178, Percent_Identity=49.438202247191, Blast_Score=182, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 24321; Mature: 24190

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTTRAFGALGSLAFALSTSVPGIQSAAIEGGELVVRTGRDNLIALMGMLRDDPRYACE
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHH
QLMDLCGVDYPARTERFDVVYNLLSVTLNHRIRVIVTTDETNPVPSVHHLWPAATWWERE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHCCCCCHHHHH
CYDLFGVLFSGQPDLRRILTDYGFEGHPLRKDFPLTGYVEVRYDEDRREVVYEPVKLTQD
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
FRNFDFESPWEGILTLPGDEKAHETRQGLKLPR
HHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
ARTTRAFGALGSLAFALSTSVPGIQSAAIEGGELVVRTGRDNLIALMGMLRDDPRYACE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHH
QLMDLCGVDYPARTERFDVVYNLLSVTLNHRIRVIVTTDETNPVPSVHHLWPAATWWERE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHCCCCCHHHHH
CYDLFGVLFSGQPDLRRILTDYGFEGHPLRKDFPLTGYVEVRYDEDRREVVYEPVKLTQD
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
FRNFDFESPWEGILTLPGDEKAHETRQGLKLPR
HHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA