| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ate
Identifier: 162148786
GI number: 162148786
Start: 3102645
End: 3103427
Strand: Direct
Name: ate
Synonym: GDI_3015
Alternate gene names: 162148786
Gene position: 3102645-3103427 (Clockwise)
Preceding gene: 162148785
Following gene: 162148797
Centisome position: 78.66
GC content: 67.18
Gene sequence:
>783_bases ATGACCTATACATCGCCACGTCGTCCGCAACTTTTCTACACGACCGCCCCCATGCCGTGTCCCTATGTCGCAGGCCGGAT GGAACGCAAGGTGGTGACCGACATTGGCGGGCCGGACGCCGAACGGCTGCATAACCGCCTGTCGCGCGCCGGTTTCCGGC GCAGCCACACCATCGCCTATGCCCCGGTCTGCCCGTCCTGCAGCGCGTGCGTGCCCATCCGGGTGCCGGTGGCCTCCTTC TCGCCCGACCGCACGCAGCGCAGGACCCTGCGCCGCAATGCGACGATCGAGGGGTTCGAGGTTCCGGCCCACGCCACGAC CGAGCAATTCACCCTGTTCCAGCGCTACCAGTTCGCCCGCCATGCCGAGGGCGACATGGCGGCGATGAATTTCTACGATT ACCGGGCGATGATCGAGGACACCCCGATCGACACGATGATGATCGAGTTCCGCACGCCCGAGGACCGGCTGGTCTGCGTC AGCCTGATCGACCGGCTGGATGACGGGCTGTCGGCGGTCTACAGCTTCTTCGACCCCACGATGGACGCCCGGTCGCTGGG GTCCTACGCGATCATGCACCTGATCGCGCACACGCGGCGGCTGGGGCTGCCCTATCTCTATCTGGGCTACTGGATTCGCG ACAGCGCCAAGATGGCGTACAAGGCCCGCTTCCAGCCGGCGGAAATCCTGTTCCACGGCGCCTGGACGCCGCTGGACCGC GACCGCCTGCCCGAGGAAGGCGATCGCGGGCCCGCCCGCTTCCCGGCCAGCCTGACCGAGTAG
Upstream 100 bases:
>100_bases GTTTCGGAGCGGTACCGCGTGGCGCCAGGAGACATGCGGACCCGTCGCCGTTGGCCCCTGACATCGGCCGTGGGGGCGCT GAATCCCGTCGAGGAGGCGT
Downstream 100 bases:
>100_bases ACCGACCTACCCGCCGGCCGGGGTCTTCGGTTTGGGCTTGCGGGTCGCCCAGGCCGGGGCGGGTCGGCCGACATCGGCGC GCTTGCCCAGATAGTCACGG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTYTSPRRPQLFYTTAPMPCPYVAGRMERKVVTDIGGPDAERLHNRLSRAGFRRSHTIAYAPVCPSCSACVPIRVPVASF SPDRTQRRTLRRNATIEGFEVPAHATTEQFTLFQRYQFARHAEGDMAAMNFYDYRAMIEDTPIDTMMIEFRTPEDRLVCV SLIDRLDDGLSAVYSFFDPTMDARSLGSYAIMHLIAHTRRLGLPYLYLGYWIRDSAKMAYKARFQPAEILFHGAWTPLDR DRLPEEGDRGPARFPASLTE
Sequences:
>Translated_260_residues MTYTSPRRPQLFYTTAPMPCPYVAGRMERKVVTDIGGPDAERLHNRLSRAGFRRSHTIAYAPVCPSCSACVPIRVPVASF SPDRTQRRTLRRNATIEGFEVPAHATTEQFTLFQRYQFARHAEGDMAAMNFYDYRAMIEDTPIDTMMIEFRTPEDRLVCV SLIDRLDDGLSAVYSFFDPTMDARSLGSYAIMHLIAHTRRLGLPYLYLGYWIRDSAKMAYKARFQPAEILFHGAWTPLDR DRLPEEGDRGPARFPASLTE >Mature_259_residues TYTSPRRPQLFYTTAPMPCPYVAGRMERKVVTDIGGPDAERLHNRLSRAGFRRSHTIAYAPVCPSCSACVPIRVPVASFS PDRTQRRTLRRNATIEGFEVPAHATTEQFTLFQRYQFARHAEGDMAAMNFYDYRAMIEDTPIDTMMIEFRTPEDRLVCVS LIDRLDDGLSAVYSFFDPTMDARSLGSYAIMHLIAHTRRLGLPYLYLGYWIRDSAKMAYKARFQPAEILFHGAWTPLDRD RLPEEGDRGPARFPASLTE
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
Organism=Caenorhabditis elegans, GI32563965, Length=147, Percent_Identity=30.6122448979592, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI32563963, Length=147, Percent_Identity=30.6122448979592, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_GLUDA (A9HRQ0)
Other databases:
- EMBL: AM889285 - EMBL: CP001189 - RefSeq: YP_001603247.1 - RefSeq: YP_002277693.1 - GeneID: 5791840 - GeneID: 6976794 - GenomeReviews: AM889285_GR - GenomeReviews: CP001189_GR - KEGG: gdj:Gdia_3351 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 29746; Mature: 29615
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTSPRRPQLFYTTAPMPCPYVAGRMERKVVTDIGGPDAERLHNRLSRAGFRRSHTIAY CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEE APVCPSCSACVPIRVPVASFSPDRTQRRTLRRNATIEGFEVPAHATTEQFTLFQRYQFAR CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHH HAEGDMAAMNFYDYRAMIEDTPIDTMMIEFRTPEDRLVCVSLIDRLDDGLSAVYSFFDPT CCCCCEEEHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC MDARSLGSYAIMHLIAHTRRLGLPYLYLGYWIRDSAKMAYKARFQPAEILFHGAWTPLDR CCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHCCCHHHEEEECCCCCCCH DRLPEEGDRGPARFPASLTE HCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TYTSPRRPQLFYTTAPMPCPYVAGRMERKVVTDIGGPDAERLHNRLSRAGFRRSHTIAY CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEE APVCPSCSACVPIRVPVASFSPDRTQRRTLRRNATIEGFEVPAHATTEQFTLFQRYQFAR CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHH HAEGDMAAMNFYDYRAMIEDTPIDTMMIEFRTPEDRLVCVSLIDRLDDGLSAVYSFFDPT CCCCCEEEHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC MDARSLGSYAIMHLIAHTRRLGLPYLYLGYWIRDSAKMAYKARFQPAEILFHGAWTPLDR CCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHCCCHHHEEEECCCCCCCH DRLPEEGDRGPARFPASLTE HCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA