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The map label for this gene is trbB [H]

Identifier: 162148686

GI number: 162148686

Start: 2998619

End: 2999674

Strand: Reverse

Name: trbB [H]

Synonym: GDI_2914

Alternate gene names: 162148686

Gene position: 2999674-2998619 (Counterclockwise)

Preceding gene: 162148688

Following gene: 162148685

Centisome position: 76.05

GC content: 67.99

Gene sequence:

>1056_bases
TTGCCCGGATGGCTCAACGCCACGGGGACCATTATGCGGACATCCGCTCACCACGCAGGTGCGGCCGCGCGGAGCGTTTC
CATGCTGCGCACGGCCATGGGGCGGCCCATCGCCGCGCATCTGGCAGATCCGGCTGTGGTCGAAGTCATGCTCAATCCGG
ATGGTCGGTTGTGGGTCGACCGGCTGTCCGAGGGACTCGCCGACACAGGCGATACCATCTCCCCGGCCGATGCCGAGCGC
ATCTTGCGGCTGGTCGCGCATCATGTCGGGGCTGAGGTGCATGAGGCAGCACCGCGCGTATCGGCGGAACTGCCGACGGG
AGAGCGGTTCGAAGGTCTGCTGCCTCCGGTGGTGACAGCGCCGAGCTTTGCGATCCGCAAACCGGCCGTCGCCGTGTTCA
CCCTCAACGATTACGTCGACGCCCGAATCATGACAGCGGCGCAGGCGAGCTTTCTGCGCCGGGCGGTCGCTGGGCGGCAG
AATATCGTGGTCGCGGGCGGGACTTCGACCGGCAAGACCACGCTGGTCAATGCCCTGCTGGCCGAATTGGCCAAGACTAC
CGACCGCGTGGTGCTGATCGAGGACACCCGCGAATTGCAATGCACCGCGTCCAACCTGATCGCGCTGCGCACCCGTGACG
GGGTGGTCACTCTGTCCGAGCTGGTGCGCTCCGCCTTGCGGTTGCGGCCCGACCGGATTCCGATCGGTGAGGTGCGCGGT
CCGGAGGCGCTCGATCTCCTCAAGGCCTGGGGTACCGGTCATCCCGGCGGCGTGGGCACGCTGCACGCCGGCACGGCGCT
GGGTGCGCTGCGGCGGCTGGAGCAACTGATCCAGGAGATCGTCGTGACCGTACCCCGCGCGCTGATTGCCGAGACGATCG
ACGTGATCGCGGTCCTCTCCGGGCGCGGCGCCGCGCGTCGGCTGTCCGAACTGGCCACGGTCGATGCGCTCGACCCGGTG
AGCGGCGACTACCGGATCTCTCCCTTCGAGGCGCCGTCCGCACAGGGACCGTGCCCAGGCCCTTCCAACCTTTCCAGCCT
CAAGGATCGTGAGTGA

Upstream 100 bases:

>100_bases
CCTGTCCGCGCCAACCTCCGCCATAGTACGCAGTTCGTGATTTTTTCTGTTGCGGATCAAACGCTTCTGCATCTTCTAAC
TGTCCCCGTCGTCGTCCGGA

Downstream 100 bases:

>100_bases
TGTCGCAGACCCTGTCCGCGCGCATTTTCGTAAGCGCGCCCGCCAGCCGCCTCTCCCGTCTGACCAGCATGGCCGGGATC
GCCCTGTTCGCCGCAACCTC

Product: conjugal transfer protein trbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPGWLNATGTIMRTSAHHAGAAARSVSMLRTAMGRPIAAHLADPAVVEVMLNPDGRLWVDRLSEGLADTGDTISPADAER
ILRLVAHHVGAEVHEAAPRVSAELPTGERFEGLLPPVVTAPSFAIRKPAVAVFTLNDYVDARIMTAAQASFLRRAVAGRQ
NIVVAGGTSTGKTTLVNALLAELAKTTDRVVLIEDTRELQCTASNLIALRTRDGVVTLSELVRSALRLRPDRIPIGEVRG
PEALDLLKAWGTGHPGGVGTLHAGTALGALRRLEQLIQEIVVTVPRALIAETIDVIAVLSGRGAARRLSELATVDALDPV
SGDYRISPFEAPSAQGPCPGPSNLSSLKDRE

Sequences:

>Translated_351_residues
MPGWLNATGTIMRTSAHHAGAAARSVSMLRTAMGRPIAAHLADPAVVEVMLNPDGRLWVDRLSEGLADTGDTISPADAER
ILRLVAHHVGAEVHEAAPRVSAELPTGERFEGLLPPVVTAPSFAIRKPAVAVFTLNDYVDARIMTAAQASFLRRAVAGRQ
NIVVAGGTSTGKTTLVNALLAELAKTTDRVVLIEDTRELQCTASNLIALRTRDGVVTLSELVRSALRLRPDRIPIGEVRG
PEALDLLKAWGTGHPGGVGTLHAGTALGALRRLEQLIQEIVVTVPRALIAETIDVIAVLSGRGAARRLSELATVDALDPV
SGDYRISPFEAPSAQGPCPGPSNLSSLKDRE
>Mature_350_residues
PGWLNATGTIMRTSAHHAGAAARSVSMLRTAMGRPIAAHLADPAVVEVMLNPDGRLWVDRLSEGLADTGDTISPADAERI
LRLVAHHVGAEVHEAAPRVSAELPTGERFEGLLPPVVTAPSFAIRKPAVAVFTLNDYVDARIMTAAQASFLRRAVAGRQN
IVVAGGTSTGKTTLVNALLAELAKTTDRVVLIEDTRELQCTASNLIALRTRDGVVTLSELVRSALRLRPDRIPIGEVRGP
EALDLLKAWGTGHPGGVGTLHAGTALGALRRLEQLIQEIVVTVPRALIAETIDVIAVLSGRGAARRLSELATVDALDPVS
GDYRISPFEAPSAQGPCPGPSNLSSLKDRE

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 37041; Mature: 36910

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGWLNATGTIMRTSAHHAGAAARSVSMLRTAMGRPIAAHLADPAVVEVMLNPDGRLWVD
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCHHHH
RLSEGLADTGDTISPADAERILRLVAHHVGAEVHEAAPRVSAELPTGERFEGLLPPVVTA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCC
PSFAIRKPAVAVFTLNDYVDARIMTAAQASFLRRAVAGRQNIVVAGGTSTGKTTLVNALL
CCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
AELAKTTDRVVLIEDTRELQCTASNLIALRTRDGVVTLSELVRSALRLRPDRIPIGEVRG
HHHHHCCCCEEEEECCCCCEEECCCEEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCCC
PEALDLLKAWGTGHPGGVGTLHAGTALGALRRLEQLIQEIVVTVPRALIAETIDVIAVLS
CHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRGAARRLSELATVDALDPVSGDYRISPFEAPSAQGPCPGPSNLSSLKDRE
CCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGWLNATGTIMRTSAHHAGAAARSVSMLRTAMGRPIAAHLADPAVVEVMLNPDGRLWVD
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCHHHH
RLSEGLADTGDTISPADAERILRLVAHHVGAEVHEAAPRVSAELPTGERFEGLLPPVVTA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCC
PSFAIRKPAVAVFTLNDYVDARIMTAAQASFLRRAVAGRQNIVVAGGTSTGKTTLVNALL
CCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
AELAKTTDRVVLIEDTRELQCTASNLIALRTRDGVVTLSELVRSALRLRPDRIPIGEVRG
HHHHHCCCCEEEEECCCCCEEECCCEEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCCC
PEALDLLKAWGTGHPGGVGTLHAGTALGALRRLEQLIQEIVVTVPRALIAETIDVIAVLS
CHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRGAARRLSELATVDALDPVSGDYRISPFEAPSAQGPCPGPSNLSSLKDRE
CCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]