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The map label for this gene is trbC

Identifier: 162148685

GI number: 162148685

Start: 2998266

End: 2998622

Strand: Reverse

Name: trbC

Synonym: GDI_2913

Alternate gene names: NA

Gene position: 2998622-2998266 (Counterclockwise)

Preceding gene: 162148686

Following gene: 162148684

Centisome position: 76.03

GC content: 65.55

Gene sequence:

>357_bases
GTGATGTCGCAGACCCTGTCCGCGCGCATTTTCGTAAGCGCGCCCGCCAGCCGCCTCTCCCGTCTGACCAGCATGGCCGG
GATCGCCCTGTTCGCCGCAACCTCGTCAGCCTGGGCCTCCGGGTCCGGCATGCCGTGGGAGGAACCGCTCAACCAGATCC
TGGAATCCATCCAGGGGCCGGTGGCACGCATCGTCTCGGTGATCATCATCACCGTGACCGGCCTGACCCTGGCCTTCGGG
GAAACGTCGGGCGGCTTCCGACGCCTGATCCAGATCGTCTTTGGCCTCTCCATCGCCTTCGCGGCGTCGAGCTTCTTCCT
CTCTTTCTTCAGCTTCAGCGGCGGGGCGCTGATCTGA

Upstream 100 bases:

>100_bases
ACCCGGTGAGCGGCGACTACCGGATCTCTCCCTTCGAGGCGCCGTCCGCACAGGGACCGTGCCCAGGCCCTTCCAACCTT
TCCAGCCTCAAGGATCGTGA

Downstream 100 bases:

>100_bases
TGGCGGGATATGACGATGACGCGGTGCCGGGCTTCCATGTCCCGGTGCATCGCTCCCTGACCGACCCGATCCTGCTGGGC
GGGGCACCCCGCACGTTGGC

Product: conjugal transfer protein trbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MMSQTLSARIFVSAPASRLSRLTSMAGIALFAATSSAWASGSGMPWEEPLNQILESIQGPVARIVSVIIITVTGLTLAFG
ETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI

Sequences:

>Translated_118_residues
MMSQTLSARIFVSAPASRLSRLTSMAGIALFAATSSAWASGSGMPWEEPLNQILESIQGPVARIVSVIIITVTGLTLAFG
ETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
>Mature_118_residues
MMSQTLSARIFVSAPASRLSRLTSMAGIALFAATSSAWASGSGMPWEEPLNQILESIQGPVARIVSVIIITVTGLTLAFG
ETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12370; Mature: 12370

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSQTLSARIFVSAPASRLSRLTSMAGIALFAATSSAWASGSGMPWEEPLNQILESIQGP
CCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCH
VARIVSVIIITVTGLTLAFGETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMSQTLSARIFVSAPASRLSRLTSMAGIALFAATSSAWASGSGMPWEEPLNQILESIQGP
CCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCH
VARIVSVIIITVTGLTLAFGETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA