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The map label for this gene is trbL

Identifier: 162148681

GI number: 162148681

Start: 2993275

End: 2994741

Strand: Reverse

Name: trbL

Synonym: GDI_2909

Alternate gene names: NA

Gene position: 2994741-2993275 (Counterclockwise)

Preceding gene: 162148682

Following gene: 162148680

Centisome position: 75.93

GC content: 66.53

Gene sequence:

>1467_bases
ATGGATACAAGTAATGTCGGGATTATTGATGGATTCCTGAACATTTTCGAAACCACGATCGATTCCGGTTTCGGTCTGGT
GCAGGGCAGCGTCGTCTCGCTGGCCGGCTCTCTCTCGGTCATGGATGTGCTGCTGGCCGGTCTGTTCTGGGCCTGGGCGG
TGGACGAGGACATCATCCAGCGCCTGGTGAAGAAGACCCTCTATGTCGGCTTCTTCGCCTTCGTCATCAATCATTTCAGC
ACGCTTGCCGGCATCGTCTTCAACAGTTTCGCCACACTCGGCCTGCGGGCCGGTGGAGGAAACCTGCCGCTGGAAGATTT
CATGCACCCGGGACGGCTGGCGGCGACCGGGCTTTCGGCCGCGCAGCCGCTGCTCAATGCTGCCAGCAAACTGGCGTTTT
CCTTCGGCGCTATTGCCAGCATCGTGCAGATTCTCGTGCTGCTCCTGTGCTGGTTCATCGTGCTGGCGGCCTTCTTCATT
CTGGCCGTGCAACTGTTCGTGGCCATCGTCGAATTCAAACTGACATCGCTTGCAGGCTTCGTGCTGATCCCGTTCGCCCT
GTTCAATCGCACGGCCTTCCTCGCCGAGAAGGTGCTGGGCAATGTCGTCTCGTCCGGCGTGAAGATCATGGTGCTCGCGG
TCATCTCCGCCATCGCCTCCGTTCTCTTCAAGCAATTCACGACCTCCTACGGGAACACTGCGCCGACCGTCGGGCAGGCG
CTGTCCGTGGTGCTGGCCTCGCTGTGCATCGCGGGCCTTGCGATCTTCGGTGGGTCTCTCGCCAACGGGCTGATCTCTGG
CGCGCCGCAGCTTGGTGCCGGGGCTGCCGTCGGAACCGGAATGGCCGTCGGTGCGATGGGCGCCGCTGCCGTCGCGGCTC
CGGCGGCGATCGCGTTGGGAGGTGCGGCAGCACTCGGCGCCACGGCGGCGGCCGCGCGGGGAGGGGCCGCAATCGCGGGT
GCTGCGACCACCGCCTACTCCATGGGGGCCGCCGGACAAACCGGTGCGGCTGGCGTGGCCGCCGCCGCCGGTAATGTCGG
TCGCGCGGCGGGTGGTGCGGCGGTGAACGCCGTGAAGAGCAAGGCCGCCTCCGCCGCCTCGTCCCTGAAGGAAAGCTACG
CCTCCGGCGGTCAATGGGCCGCGCGCGGCATGGGCGGAGGAGGCAGCGGCTCTGGCGGAGGCGCTGGCAGTGATCCGAAC
TCTGGTGGCGGCGCTTCCGGCGCGGGACCGTCCGGCTCTGGCGGTGGCGCTCCTTCGGGCGGTGGTCCGGCCGGTGGCGG
GCCGTCGAATGACGGTAGCGGAGGACCGGAGGACGCTGGCTCCGGCGCGGACGGCAAGCCGCCGAAATGGGCGCGGAACA
TGAAACGTCGCAATGCCGCCGCCCATGCCGCCGAGGCAGCCCATGTCATCCGCGCGGCCGATGGCGGCGGCGGATCGTCC
TCGATCGATCTCTCGGAAAAGGAATGA

Upstream 100 bases:

>100_bases
CGCCAACGAAGCCGGCGCCGAAGCTCAGTACCAGCATTTCGCCCATTATGACGCCTACGTGCCCGAGGCCGTCTCGATAC
CCGGTTCGGGAAACTGACCC

Downstream 100 bases:

>100_bases
CCGCGATGTTCCGTCGCTCCACCACACGCTATGGCGACTCTCCAATCCCGGTGACGCCGTACCAGCAGGCGGCCCAGCTC
TGGGATGAGCGGATCGGGTC

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MDTSNVGIIDGFLNIFETTIDSGFGLVQGSVVSLAGSLSVMDVLLAGLFWAWAVDEDIIQRLVKKTLYVGFFAFVINHFS
TLAGIVFNSFATLGLRAGGGNLPLEDFMHPGRLAATGLSAAQPLLNAASKLAFSFGAIASIVQILVLLLCWFIVLAAFFI
LAVQLFVAIVEFKLTSLAGFVLIPFALFNRTAFLAEKVLGNVVSSGVKIMVLAVISAIASVLFKQFTTSYGNTAPTVGQA
LSVVLASLCIAGLAIFGGSLANGLISGAPQLGAGAAVGTGMAVGAMGAAAVAAPAAIALGGAAALGATAAAARGGAAIAG
AATTAYSMGAAGQTGAAGVAAAAGNVGRAAGGAAVNAVKSKAASAASSLKESYASGGQWAARGMGGGGSGSGGGAGSDPN
SGGGASGAGPSGSGGGAPSGGGPAGGGPSNDGSGGPEDAGSGADGKPPKWARNMKRRNAAAHAAEAAHVIRAADGGGGSS
SIDLSEKE

Sequences:

>Translated_488_residues
MDTSNVGIIDGFLNIFETTIDSGFGLVQGSVVSLAGSLSVMDVLLAGLFWAWAVDEDIIQRLVKKTLYVGFFAFVINHFS
TLAGIVFNSFATLGLRAGGGNLPLEDFMHPGRLAATGLSAAQPLLNAASKLAFSFGAIASIVQILVLLLCWFIVLAAFFI
LAVQLFVAIVEFKLTSLAGFVLIPFALFNRTAFLAEKVLGNVVSSGVKIMVLAVISAIASVLFKQFTTSYGNTAPTVGQA
LSVVLASLCIAGLAIFGGSLANGLISGAPQLGAGAAVGTGMAVGAMGAAAVAAPAAIALGGAAALGATAAAARGGAAIAG
AATTAYSMGAAGQTGAAGVAAAAGNVGRAAGGAAVNAVKSKAASAASSLKESYASGGQWAARGMGGGGSGSGGGAGSDPN
SGGGASGAGPSGSGGGAPSGGGPAGGGPSNDGSGGPEDAGSGADGKPPKWARNMKRRNAAAHAAEAAHVIRAADGGGGSS
SIDLSEKE
>Mature_488_residues
MDTSNVGIIDGFLNIFETTIDSGFGLVQGSVVSLAGSLSVMDVLLAGLFWAWAVDEDIIQRLVKKTLYVGFFAFVINHFS
TLAGIVFNSFATLGLRAGGGNLPLEDFMHPGRLAATGLSAAQPLLNAASKLAFSFGAIASIVQILVLLLCWFIVLAAFFI
LAVQLFVAIVEFKLTSLAGFVLIPFALFNRTAFLAEKVLGNVVSSGVKIMVLAVISAIASVLFKQFTTSYGNTAPTVGQA
LSVVLASLCIAGLAIFGGSLANGLISGAPQLGAGAAVGTGMAVGAMGAAAVAAPAAIALGGAAALGATAAAARGGAAIAG
AATTAYSMGAAGQTGAAGVAAAAGNVGRAAGGAAVNAVKSKAASAASSLKESYASGGQWAARGMGGGGSGSGGGAGSDPN
SGGGASGAGPSGSGGGAPSGGGPAGGGPSNDGSGGPEDAGSGADGKPPKWARNMKRRNAAAHAAEAAHVIRAADGGGGSS
SIDLSEKE

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46994; Mature: 46994

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCC
>Mature Secondary Structure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CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA