Click here to switch to the map view.

The map label for this gene is 162148642

Identifier: 162148642

GI number: 162148642

Start: 2954897

End: 2955745

Strand: Reverse

Name: 162148642

Synonym: GDI_2869

Alternate gene names: NA

Gene position: 2955745-2954897 (Counterclockwise)

Preceding gene: 162148643

Following gene: 162148641

Centisome position: 74.94

GC content: 66.9

Gene sequence:

>849_bases
ATGACCCCCTGCCTTCCACGTCTCCTCATGTCGGGGCCGTTTTTTGGCCTCGCCAAGCGACCGGCTTCGACGGCGGTAGT
CTTTACGCTGGGCGACCTGGCGGTTCGCGTCACGTCCGAGCATACCAACGCCACCATCTGGGACGCCGATATCCTGATCT
GGGCAATATCGGCTCTCAAGGCAACACGATATCGCAACGATCTCCCGCCCGGCCGTTTCCGGGAAACCCGCCACGCCCTG
CTGGCCTTTCTCGGACGCACCGCGTCGGGCGGTCAGTACGAACGCCTCCCGGCGGCACTGGACCGGCTCGCCACTACGCG
CGTCACGATCACGCCCGGAACTGCATCGTCGCGCGCTGTCTCGTTCACCTGGCTGTCCGAGTGGTCGCATCGTGGCGGGG
TAATCGAACTGCGGATCGCCGACTGGCTGCGGGACGCCGCTCTGGCGCCACGCGCGGTCCTGGCTCTGGATCCCCGCTAT
TTCGCGCTGAAGGGCGGCCTGGAACGGCGGCTCTACCTGCTCGCCCGACGCCATGCCGGCCGGCAGCCCGGCGGCTGGTC
GTTCGATCTTGCCCACCTCCGTCGCAAGACCGGGATCGCGCCGTCGGTTCGGGACTTCCCGGCCGCTGTCGCGCGGATCG
TCCGGCGCCAGTCACTGCCCGGCTACCGCCTGACGCTGGAAGGCCGGGACGCCCGCGTCCGCCTCCATTTCCGTCCGGAG
ACAGCCTGGCTCCCCGCAAGTCCTGTGGATAACTCTGTTGATAATCTGTGGGCAGGATGTGGGGAAGTCGGGCCGGCACG
CCTATCGACCGCGAAAAGCACGCCTATCGCCGTGAATTGGTCCCTTTAA

Upstream 100 bases:

>100_bases
ACCTCCGCGAGTGGGTGGAGAACGCGCGCTGCAACTCGCTGCGTTCGGAAAACTACATCCGCATGCGCAGCGCGGTCAGC
CGCCGGCAGAGGGGGATAAA

Downstream 100 bases:

>100_bases
CGGATTGATATGATGACGAAAAATCCGCCTCTTCTAAAGATTCTAAAAAGACTCTCTCTGTACTGGCAGACCGCGCGCGA
GCGTGCGCACGACGCTGCCC

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTPCLPRLLMSGPFFGLAKRPASTAVVFTLGDLAVRVTSEHTNATIWDADILIWAISALKATRYRNDLPPGRFRETRHAL
LAFLGRTASGGQYERLPAALDRLATTRVTITPGTASSRAVSFTWLSEWSHRGGVIELRIADWLRDAALAPRAVLALDPRY
FALKGGLERRLYLLARRHAGRQPGGWSFDLAHLRRKTGIAPSVRDFPAAVARIVRRQSLPGYRLTLEGRDARVRLHFRPE
TAWLPASPVDNSVDNLWAGCGEVGPARLSTAKSTPIAVNWSL

Sequences:

>Translated_282_residues
MTPCLPRLLMSGPFFGLAKRPASTAVVFTLGDLAVRVTSEHTNATIWDADILIWAISALKATRYRNDLPPGRFRETRHAL
LAFLGRTASGGQYERLPAALDRLATTRVTITPGTASSRAVSFTWLSEWSHRGGVIELRIADWLRDAALAPRAVLALDPRY
FALKGGLERRLYLLARRHAGRQPGGWSFDLAHLRRKTGIAPSVRDFPAAVARIVRRQSLPGYRLTLEGRDARVRLHFRPE
TAWLPASPVDNSVDNLWAGCGEVGPARLSTAKSTPIAVNWSL
>Mature_281_residues
TPCLPRLLMSGPFFGLAKRPASTAVVFTLGDLAVRVTSEHTNATIWDADILIWAISALKATRYRNDLPPGRFRETRHALL
AFLGRTASGGQYERLPAALDRLATTRVTITPGTASSRAVSFTWLSEWSHRGGVIELRIADWLRDAALAPRAVLALDPRYF
ALKGGLERRLYLLARRHAGRQPGGWSFDLAHLRRKTGIAPSVRDFPAAVARIVRRQSLPGYRLTLEGRDARVRLHFRPET
AWLPASPVDNSVDNLWAGCGEVGPARLSTAKSTPIAVNWSL

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 31119; Mature: 30988

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPCLPRLLMSGPFFGLAKRPASTAVVFTLGDLAVRVTSEHTNATIWDADILIWAISALK
CCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEEHHHHHHHHHHHH
ATRYRNDLPPGRFRETRHALLAFLGRTASGGQYERLPAALDRLATTRVTITPGTASSRAV
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCEE
SFTWLSEWSHRGGVIELRIADWLRDAALAPRAVLALDPRYFALKGGLERRLYLLARRHAG
EEEEHHHHCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCC
RQPGGWSFDLAHLRRKTGIAPSVRDFPAAVARIVRRQSLPGYRLTLEGRDARVRLHFRPE
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCC
TAWLPASPVDNSVDNLWAGCGEVGPARLSTAKSTPIAVNWSL
CCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCEEEEECC
>Mature Secondary Structure 
TPCLPRLLMSGPFFGLAKRPASTAVVFTLGDLAVRVTSEHTNATIWDADILIWAISALK
CCCHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEEHHHHHHHHHHHH
ATRYRNDLPPGRFRETRHALLAFLGRTASGGQYERLPAALDRLATTRVTITPGTASSRAV
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCEE
SFTWLSEWSHRGGVIELRIADWLRDAALAPRAVLALDPRYFALKGGLERRLYLLARRHAG
EEEEHHHHCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCC
RQPGGWSFDLAHLRRKTGIAPSVRDFPAAVARIVRRQSLPGYRLTLEGRDARVRLHFRPE
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCC
TAWLPASPVDNSVDNLWAGCGEVGPARLSTAKSTPIAVNWSL
CCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]