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The map label for this gene is msrB [H]

Identifier: 162148539

GI number: 162148539

Start: 2853188

End: 2853610

Strand: Direct

Name: msrB [H]

Synonym: GDI_2763

Alternate gene names: 162148539

Gene position: 2853188-2853610 (Clockwise)

Preceding gene: 162148533

Following gene: 162148540

Centisome position: 72.34

GC content: 66.43

Gene sequence:

>423_bases
ATGGCAGCGTTCGGCCGTGCAAGGGCCACCGAGCATTATCCCGTCACGCACACCGACGCCGAATGGCACCGCCTGCTGAC
GCCCGCGCAATACAATGTGCTGCGCGAGGCAGGCACCGAAATGCCGTATTCGAGCCCGTTGCTGACCGAGCATCGCCCCG
GCCGCTTCGCCTGTGCCGGATGCGACACGGCAGCCTTCGACGCGCGCACGAAGTTCGAAAGCGGCACCGGCTGGCCGAGT
TTCGACAGCGCCCTGCCGCACGCCGTGCAGGAACGTGGCGATGACAGCCTGGGCATGGAGCGCACGGAGGTGCGATGCGC
GACCTGCGGCAGTCATCTCGGCCACGTGTTCGATGACGGACCGCAGCCAACGGGCCTGCGCTACTGCATGAACGGCGTGG
CACTTTCATTCCATACGGCCTGA

Upstream 100 bases:

>100_bases
TAACCGGACAGGGAATTTTCGCGAAGAACGCTGTGACAACCCAAAACAAGGGGGACACAGCATGACATCCCGCCGCCAAT
TCTTTCTTGCCGCCGTTGCC

Downstream 100 bases:

>100_bases
AGGAACTGGAAACATGACACGAGCAGGACTTTTCGGCGTTTCCCTGGTGGCGCTGACCACATTCGGTGTCGCCTGCCACA
CGGCAATGGGCGAGCCCGGC

Product: peptide methionine sulfoxide reductase msrB

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAAFGRARATEHYPVTHTDAEWHRLLTPAQYNVLREAGTEMPYSSPLLTEHRPGRFACAGCDTAAFDARTKFESGTGWPS
FDSALPHAVQERGDDSLGMERTEVRCATCGSHLGHVFDDGPQPTGLRYCMNGVALSFHTA

Sequences:

>Translated_140_residues
MAAFGRARATEHYPVTHTDAEWHRLLTPAQYNVLREAGTEMPYSSPLLTEHRPGRFACAGCDTAAFDARTKFESGTGWPS
FDSALPHAVQERGDDSLGMERTEVRCATCGSHLGHVFDDGPQPTGLRYCMNGVALSFHTA
>Mature_139_residues
AAFGRARATEHYPVTHTDAEWHRLLTPAQYNVLREAGTEMPYSSPLLTEHRPGRFACAGCDTAAFDARTKFESGTGWPSF
DSALPHAVQERGDDSLGMERTEVRCATCGSHLGHVFDDGPQPTGLRYCMNGVALSFHTA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=134, Percent_Identity=45.5223880597015, Blast_Score=125, Evalue=1e-29,
Organism=Homo sapiens, GI301336162, Length=134, Percent_Identity=45.5223880597015, Blast_Score=125, Evalue=1e-29,
Organism=Homo sapiens, GI73089054, Length=134, Percent_Identity=45.5223880597015, Blast_Score=125, Evalue=1e-29,
Organism=Homo sapiens, GI37620216, Length=137, Percent_Identity=45.2554744525547, Blast_Score=124, Evalue=2e-29,
Organism=Homo sapiens, GI117606353, Length=127, Percent_Identity=46.4566929133858, Blast_Score=118, Evalue=2e-27,
Organism=Escherichia coli, GI1788077, Length=118, Percent_Identity=44.9152542372881, Blast_Score=111, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17553450, Length=131, Percent_Identity=41.2213740458015, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115532676, Length=131, Percent_Identity=41.2213740458015, Blast_Score=107, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319816, Length=127, Percent_Identity=37.007874015748, Blast_Score=90, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221378664, Length=125, Percent_Identity=43.2, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI221378662, Length=136, Percent_Identity=38.9705882352941, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI45553335, Length=128, Percent_Identity=42.1875, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21356369, Length=128, Percent_Identity=42.1875, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24645799, Length=128, Percent_Identity=42.96875, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24645804, Length=144, Percent_Identity=37.5, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24645801, Length=144, Percent_Identity=37.5, Blast_Score=106, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 15314; Mature: 15183

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFGRARATEHYPVTHTDAEWHRLLTPAQYNVLREAGTEMPYSSPLLTEHRPGRFACAG
CCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC
CDTAAFDARTKFESGTGWPSFDSALPHAVQERGDDSLGMERTEVRCATCGSHLGHVFDDG
CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHCCC
PQPTGLRYCMNGVALSFHTA
CCCCHHHHHHCCEEEEEECC
>Mature Secondary Structure 
AAFGRARATEHYPVTHTDAEWHRLLTPAQYNVLREAGTEMPYSSPLLTEHRPGRFACAG
CCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC
CDTAAFDARTKFESGTGWPSFDSALPHAVQERGDDSLGMERTEVRCATCGSHLGHVFDDG
CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHCCC
PQPTGLRYCMNGVALSFHTA
CCCCHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA