| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is msrA [H]
Identifier: 162148540
GI number: 162148540
Start: 2853624
End: 2854331
Strand: Direct
Name: msrA [H]
Synonym: GDI_2764
Alternate gene names: 162148540
Gene position: 2853624-2854331 (Clockwise)
Preceding gene: 162148539
Following gene: 162148541
Centisome position: 72.35
GC content: 63.42
Gene sequence:
>708_bases ATGACACGAGCAGGACTTTTCGGCGTTTCCCTGGTGGCGCTGACCACATTCGGTGTCGCCTGCCACACGGCAATGGGCGA GCCCGGCCCCCGTATTCTTCCGGCGCCCGTTCTGGCGGAACCGGCGCCTGCGACGCACCATGCAAGTACCGTTTTCGCAG GTGGTTGCTTCTGGGGCGTGCAGAGCGTGTTCGAACATATTCGTGGCGTGACCGCGACCCGCGCGGGTTTCGACGGCGGT GCGCGCGACACGGCGGATTATGAGACCGTCAGCAGCGGCGATACGGAACACGCAGAGTCGGTTGAAGTCGACTTTGATCC GACGCAGGTCAGCTACGGCACGCTGATGCGCATCTTCTTTTCTGTTGCGCTCGACCCGACACAGGTGAACCGCCAGTTCC CGGATGACGGCACGCAATATCGCTCCGTGCTCTACACCCGATCCGCGCAGCAGGCTCGGGAAGCGCATGCCTATATCGCG CAGCTCGACGCGGCGCATGTCTTCACGCGCCCCATCGCAACGCAGGTGGCGCCGGATCACGGATTCTACCCAGCCGAGGC AGATCACCAAAATTTCGCGGCCCGCTATCCGGATCATCCGTATATCGCTACATATGACGCACCACGGATCGAGGCGCTGC ACGCGTTGTTCGCATCGTCCTGGCGCGCGCAGCCTGTGCTGACGCTGGCCGACGATGGCGGGAGCTGA
Upstream 100 bases:
>100_bases CTCGGCCACGTGTTCGATGACGGACCGCAGCCAACGGGCCTGCGCTACTGCATGAACGGCGTGGCACTTTCATTCCATAC GGCCTGAAGGAACTGGAAAC
Downstream 100 bases:
>100_bases CTCTCGCCGTAACCAGGGACGGAGGGTTCGTGACGGAAGCGGATTGGAGCCGCTGGATGGCGGCGGCTCAGGCGGGCGAC GCCGATGCCTATCGCCACGT
Product: peptide methionine sulfoxide reductase msrA
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTRAGLFGVSLVALTTFGVACHTAMGEPGPRILPAPVLAEPAPATHHASTVFAGGCFWGVQSVFEHIRGVTATRAGFDGG ARDTADYETVSSGDTEHAESVEVDFDPTQVSYGTLMRIFFSVALDPTQVNRQFPDDGTQYRSVLYTRSAQQAREAHAYIA QLDAAHVFTRPIATQVAPDHGFYPAEADHQNFAARYPDHPYIATYDAPRIEALHALFASSWRAQPVLTLADDGGS
Sequences:
>Translated_235_residues MTRAGLFGVSLVALTTFGVACHTAMGEPGPRILPAPVLAEPAPATHHASTVFAGGCFWGVQSVFEHIRGVTATRAGFDGG ARDTADYETVSSGDTEHAESVEVDFDPTQVSYGTLMRIFFSVALDPTQVNRQFPDDGTQYRSVLYTRSAQQAREAHAYIA QLDAAHVFTRPIATQVAPDHGFYPAEADHQNFAARYPDHPYIATYDAPRIEALHALFASSWRAQPVLTLADDGGS >Mature_234_residues TRAGLFGVSLVALTTFGVACHTAMGEPGPRILPAPVLAEPAPATHHASTVFAGGCFWGVQSVFEHIRGVTATRAGFDGGA RDTADYETVSSGDTEHAESVEVDFDPTQVSYGTLMRIFFSVALDPTQVNRQFPDDGTQYRSVLYTRSAQQAREAHAYIAQ LDAAHVFTRPIATQVAPDHGFYPAEADHQNFAARYPDHPYIATYDAPRIEALHALFASSWRAQPVLTLADDGGS
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=183, Percent_Identity=34.9726775956284, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI208609995, Length=151, Percent_Identity=38.4105960264901, Blast_Score=100, Evalue=1e-21, Organism=Escherichia coli, GI1790665, Length=150, Percent_Identity=41.3333333333333, Blast_Score=111, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6320881, Length=154, Percent_Identity=31.1688311688312, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24664627, Length=149, Percent_Identity=34.2281879194631, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24664631, Length=149, Percent_Identity=33.5570469798658, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45553131, Length=142, Percent_Identity=34.5070422535211, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 25326; Mature: 25195
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAGLFGVSLVALTTFGVACHTAMGEPGPRILPAPVLAEPAPATHHASTVFAGGCFWGV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHH QSVFEHIRGVTATRAGFDGGARDTADYETVSSGDTEHAESVEVDFDPTQVSYGTLMRIFF HHHHHHHCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH SVALDPTQVNRQFPDDGTQYRSVLYTRSAQQAREAHAYIAQLDAAHVFTRPIATQVAPDH HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFYPAEADHQNFAARYPDHPYIATYDAPRIEALHALFASSWRAQPVLTLADDGGS CCCCCCCCCCCCHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure TRAGLFGVSLVALTTFGVACHTAMGEPGPRILPAPVLAEPAPATHHASTVFAGGCFWGV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHH QSVFEHIRGVTATRAGFDGGARDTADYETVSSGDTEHAESVEVDFDPTQVSYGTLMRIFF HHHHHHHCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH SVALDPTQVNRQFPDDGTQYRSVLYTRSAQQAREAHAYIAQLDAAHVFTRPIATQVAPDH HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFYPAEADHQNFAARYPDHPYIATYDAPRIEALHALFASSWRAQPVLTLADDGGS CCCCCCCCCCCCHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]