| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is artJ [H]
Identifier: 162148490
GI number: 162148490
Start: 2808178
End: 2809095
Strand: Reverse
Name: artJ [H]
Synonym: GDI_2711
Alternate gene names: 162148490
Gene position: 2809095-2808178 (Counterclockwise)
Preceding gene: 162148497
Following gene: 162148489
Centisome position: 71.22
GC content: 69.17
Gene sequence:
>918_bases ATGGAGGAAGCCGGAGTCTTGAGAGCCTGTCTGAAAATGCGCAGTGTCGGCCGACCGGGGCGCGTTTTCCGCATGTCGCG GCCAAAGGCTGCCGGGGTGCGTTCCGGCGCGCGGAAAGTGGGCGGGATTCTGGCCGGCTGCGTCCTGTCGCTCTTGCCGC TGTGCATCGGCCAGGGCGCCCAGGCGCGGGCGCTGGCCGATATCCGCGCCAGCGGTCATCTGAATATCGGTGTCAACCCG GCGCTTCCGCCGCTGGCGGCATATGATTCGCGCAACGTGATCGAGGGATTCGACGTGGATGTCGGAACCGCGCTGGCGGC GCGGCTGGGGGTGTCGCCCCGTTTGGTTCCGGTATCGTCGAGCGGGCGCATTCCCTACCTGATGGCGGGCAAGGTGGACG TGGTGCTGGGTGGGCTGACCCGCACGCCTGAACGCGCGGCCGCCATTGCGTTCTCGGCGCCGCTCTATGCCGAGGAATTC GCCATCATCGCCCCGGCGGTATCCAGGGTGGGGGGGCTGGACGACCTGGCGTCCGGACGGGTGCGGATGGTCGAGGTCCG GGGTTCCACGGCGGTGCCGTTCCTGCGGACGCATGCGCCGAAGGCACCGATCCTTCTGCTGGGCAGCTATCCGGATGCCG TGCGCGCCCTGGCCCAGGGGCGGGGTGACGCCATGGTGGACGTCATCGAATATGTCGGCCGGTTTCTGGCGGCCGAACCC CAGGCCGGATGGACGATCCAGCGCGGCTTCGCCCCCGCCGCGGGCGAGGATTGCGTGGGCGTCGCCCAGTCCGACACCGA TCTTCTGCGCGTGGTCGACGGGACGCTGGCCGACCTGAAGCGGGATGGAACAATCCAGGCCGCCTATCGTCGCTGGTTCG GCGTGTCCATGGCCACCCCGGCGGAGGGACGTCCATGA
Upstream 100 bases:
>100_bases AATCGGTTCGGGCAAGAAACTCTTCCTTGAACGGTGTTTTAATCGTATACAAAGCGTATATGTTCTTTAGAACAGTGATG CCTGGATCGCAACATCCAAT
Downstream 100 bases:
>100_bases CGGCGCTGCATTTCCAGCCGGTCCTGCAACGCCTGCCGTTCCTGCTGGGGGGCGCCGCGACGACGGTTCTTCTGTCCGTC GCGTCCTTTGGTGCCGGCCT
Product: arginine-binding periplasmic protein 2
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MEEAGVLRACLKMRSVGRPGRVFRMSRPKAAGVRSGARKVGGILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNP ALPPLAAYDSRNVIEGFDVDVGTALAARLGVSPRLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAAAIAFSAPLYAEEF AIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKAPILLLGSYPDAVRALAQGRGDAMVDVIEYVGRFLAAEP QAGWTIQRGFAPAAGEDCVGVAQSDTDLLRVVDGTLADLKRDGTIQAAYRRWFGVSMATPAEGRP
Sequences:
>Translated_305_residues MEEAGVLRACLKMRSVGRPGRVFRMSRPKAAGVRSGARKVGGILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNP ALPPLAAYDSRNVIEGFDVDVGTALAARLGVSPRLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAAAIAFSAPLYAEEF AIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKAPILLLGSYPDAVRALAQGRGDAMVDVIEYVGRFLAAEP QAGWTIQRGFAPAAGEDCVGVAQSDTDLLRVVDGTLADLKRDGTIQAAYRRWFGVSMATPAEGRP >Mature_305_residues MEEAGVLRACLKMRSVGRPGRVFRMSRPKAAGVRSGARKVGGILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNP ALPPLAAYDSRNVIEGFDVDVGTALAARLGVSPRLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAAAIAFSAPLYAEEF AIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKAPILLLGSYPDAVRALAQGRGDAMVDVIEYVGRFLAAEP QAGWTIQRGFAPAAGEDCVGVAQSDTDLLRVVDGTLADLKRDGTIQAAYRRWFGVSMATPAEGRP
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=226, Percent_Identity=27.8761061946903, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1787088, Length=229, Percent_Identity=25.764192139738, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788228, Length=263, Percent_Identity=23.574144486692, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787031, Length=261, Percent_Identity=27.2030651340996, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=25.974025974026, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788649, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786876, Length=244, Percent_Identity=22.9508196721311, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31818; Mature: 31818
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEAGVLRACLKMRSVGRPGRVFRMSRPKAAGVRSGARKVGGILAGCVLSLLPLCIGQGA CCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVGTALAARLGVSPRLVPVSS CHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC SGRIPYLMAGKVDVVLGGLTRTPERAAAIAFSAPLYAEEFAIIAPAVSRVGGLDDLASGR CCCCCEEECCCEEEEECCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCC VRMVEVRGSTAVPFLRTHAPKAPILLLGSYPDAVRALAQGRGDAMVDVIEYVGRFLAAEP EEEEEECCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC QAGWTIQRGFAPAAGEDCVGVAQSDTDLLRVVDGTLADLKRDGTIQAAYRRWFGVSMATP CCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC AEGRP CCCCC >Mature Secondary Structure MEEAGVLRACLKMRSVGRPGRVFRMSRPKAAGVRSGARKVGGILAGCVLSLLPLCIGQGA CCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVGTALAARLGVSPRLVPVSS CHHHHHHHHCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC SGRIPYLMAGKVDVVLGGLTRTPERAAAIAFSAPLYAEEFAIIAPAVSRVGGLDDLASGR CCCCCEEECCCEEEEECCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCC VRMVEVRGSTAVPFLRTHAPKAPILLLGSYPDAVRALAQGRGDAMVDVIEYVGRFLAAEP EEEEEECCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC QAGWTIQRGFAPAAGEDCVGVAQSDTDLLRVVDGTLADLKRDGTIQAAYRRWFGVSMATP CCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC AEGRP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]