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The map label for this gene is yecS [H]

Identifier: 162148489

GI number: 162148489

Start: 2807522

End: 2808181

Strand: Reverse

Name: yecS [H]

Synonym: GDI_2710

Alternate gene names: 162148489

Gene position: 2808181-2807522 (Counterclockwise)

Preceding gene: 162148490

Following gene: 162148487

Centisome position: 71.2

GC content: 65.61

Gene sequence:

>660_bases
ATGACGGCGCTGCATTTCCAGCCGGTCCTGCAACGCCTGCCGTTCCTGCTGGGGGGCGCCGCGACGACGGTTCTTCTGTC
CGTCGCGTCCTTTGGTGCCGGCCTTCTGCTGGCGGGTGGCCTTGCGGTCCTGCGCGCCGAGGGGCCGAAGGCGGGGCAGC
GGTTCAGCACGATCTACAGCACGATCATGACCAACACGCCGCAGCTTTCGCAAATCTTCGCGATCTTCTACTGTCTTGCG
CTGCTGGGGGTCATGGTGTCTCCATTCGCGTCGGTCTTCATCGGCATGGCGCTGAACGCGGCGGGCTACCTGGCGGATAT
CGTGACGACGGGGCTGGGCCGGGTGCCCCCGCTTTATCACGATGCGGCGGCTTCGCTGGGGCTGACCCGGCGGCAGGCCT
ATATGCGCGTCATCTTTCCCCATGCGCTGCAGACGATGGCGCCGGCGCTGGCCAATCATTTCCAGATCATGATCCTAGGC
AGTTCGATGGCGTCCATCTTCGGGGTCGAAGATCTGACGGGGCGCGCGTACGATGTCGGGTCGACCACCTTCCGTATTCT
GGAGGTGATGCTGGTGGCCGGGGTGCTGTATGCGCTGCTGTCCGTCGCCCTCACGGGGCTGTTCGCCCTGGGGCGCAGGC
TGTTCGAGGCCGCGGCATGA

Upstream 100 bases:

>100_bases
TCGACGGGACGCTGGCCGACCTGAAGCGGGATGGAACAATCCAGGCCGCCTATCGTCGCTGGTTCGGCGTGTCCATGGCC
ACCCCGGCGGAGGGACGTCC

Downstream 100 bases:

>100_bases
TGGCGTTTTCCCATTACGACGTCGCGCTGCTGGCGCGTGCCCTCTGGATGACGGTGGTGCTGTCCGTCGCGGGCGGGCTG
GCCGGGCTGGCCGGCGGCAC

Product: inner membrane amino-acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTALHFQPVLQRLPFLLGGAATTVLLSVASFGAGLLLAGGLAVLRAEGPKAGQRFSTIYSTIMTNTPQLSQIFAIFYCLA
LLGVMVSPFASVFIGMALNAAGYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILG
SSMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLSVALTGLFALGRRLFEAAA

Sequences:

>Translated_219_residues
MTALHFQPVLQRLPFLLGGAATTVLLSVASFGAGLLLAGGLAVLRAEGPKAGQRFSTIYSTIMTNTPQLSQIFAIFYCLA
LLGVMVSPFASVFIGMALNAAGYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILG
SSMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLSVALTGLFALGRRLFEAAA
>Mature_218_residues
TALHFQPVLQRLPFLLGGAATTVLLSVASFGAGLLLAGGLAVLRAEGPKAGQRFSTIYSTIMTNTPQLSQIFAIFYCLAL
LGVMVSPFASVFIGMALNAAGYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILGS
SMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLSVALTGLFALGRRLFEAAA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=32.3383084577114, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=26.3414634146341, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=25.2336448598131, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=25.1141552511416, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=23.8738738738739, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23102; Mature: 22971

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALHFQPVLQRLPFLLGGAATTVLLSVASFGAGLLLAGGLAVLRAEGPKAGQRFSTIYS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHH
TIMTNTPQLSQIFAIFYCLALLGVMVSPFASVFIGMALNAAGYLADIVTTGLGRVPPLYH
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
DAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYDVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHCHHHHCCCCEECC
STTFRILEVMLVAGVLYALLSVALTGLFALGRRLFEAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TALHFQPVLQRLPFLLGGAATTVLLSVASFGAGLLLAGGLAVLRAEGPKAGQRFSTIYS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHH
TIMTNTPQLSQIFAIFYCLALLGVMVSPFASVFIGMALNAAGYLADIVTTGLGRVPPLYH
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
DAAASLGLTRRQAYMRVIFPHALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYDVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHCHHHHCCCCEECC
STTFRILEVMLVAGVLYALLSVALTGLFALGRRLFEAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]