Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 162148205

GI number: 162148205

Start: 2509050

End: 2510303

Strand: Direct

Name: dadA [H]

Synonym: GDI_2422

Alternate gene names: 162148205

Gene position: 2509050-2510303 (Clockwise)

Preceding gene: 162148204

Following gene: 162148208

Centisome position: 63.61

GC content: 68.82

Gene sequence:

>1254_bases
ATGAAGATCATCATTCTCGGCAGCGGCGTCGTGGGCGTGAGTTCCGCCTGGTACCTGGCGCAGGTTGGCCATTCGGTCAC
GGTCATCGACCGCCAGCCGGGTGCCGGGCTGGAAACCAGCTTTGCCAATGCCGGGCAGGTTTCGCCCGGCTATTCCTCGC
CCTGGGCCGGCCCCGGGGTGCCGCTGAAAGCCGTGCGCTGGCTGATGATGAAGAACCGGCCCTTCGTCTTCTGGCCGATG
CCGGACATCGGCCAATGGCGCTGGCTGGCGCAGATGCTGCAAAACTGCACGACCGCCGCCTATGACCGCAACAAGGGAAG
GATGGTCCGCCTGGCTGAATACAGCCGCGACGTCCTGGCCGATCTGCGCGCCGCGACGGGCATCACCTACGACGACCGCC
AGCAGGGAACGCTGCAGGTCTTTCGCACGCAGAAGCAACTGGACCATATCGGCGACGATCTGCGGGTCCTCGACCAGTAC
CAGGTCCCGTACGAGGTGCTGGACACCGCCGGCTGTATCCATGCCGAACCCGGCTTGAGCGGGGCGCGGGAGAAGATCGT
GGGCGGCCTGCGCCTGCCCGGGGATGAAACCGGCGACGCCTTCCAGTTCACCCAGCGCCTGGCCGCGATGGCGGCGGAGC
GGGGCGTGACCTTCCTGTACGACACGACCATCCGCGCCCTGCGGCGCGAGGGCGGGCGCATCACCGGCGTGGACACCAGC
CGGGGCATGCTGGAAGCCGATGCCTATGTGCTGTCGCTGGGCAGTTTCTCGCCGGCCATGGTGCGGGCGCTGGGGCTGGA
CCTGCCGATCTATCCGGTCAAGGGCTATTCCATCACCGCCCCGATCCTGGATGCCGCGCGCGCGCCGGTATCCACGGTGA
TGGACGAGACATTCAAGATCGGCATCACCCGGCTGGGCGACCGCATCCGCGTGGGCGGCACGGCGGAACTGGCCGGATTC
AGCACCAGCCTGCGCGCGCCCCGCCGGGCCACGCTGGAGCATTCCCTGACCGACCTGTTCGCGGGCGCGGGCGACGTGCC
GGCCGCCACCTTCTGGACCGGCCTGCGCCCGATGACCCCCGACGGCACGCCCATCGTCGGCCGGACGGAGATCGGCAACC
TGTACCTGAATACCGGGCACGGCACGCTGGGTTGGACCATGGCGTGCGGGTCGGGCCGGGTCCTGGCCGACATCATGTCG
GGCCGCACGCCCGACATCGCGCATGAAGACCTGGCGCTGGCCCGGTATCGCTGA

Upstream 100 bases:

>100_bases
GGCTACGAAATCCTGACATCGCTGGGGCATCGCTATCACCGCGCCTATGTCGCGGGCGGCTCCGACGCTTTTTCCTCCTG
ACAGATCGGCACACAGGACC

Downstream 100 bases:

>100_bases
AGAGCCCGATCGTTCAGGGGCGGTTACGCCGAGGCCACGCGCCCCTGAACTGTTAATTTCTGCTGAGATTTGACCCTGGG
TTTTCATCGAGAACTGACCC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKIIILGSGVVGVSSAWYLAQVGHSVTVIDRQPGAGLETSFANAGQVSPGYSSPWAGPGVPLKAVRWLMMKNRPFVFWPM
PDIGQWRWLAQMLQNCTTAAYDRNKGRMVRLAEYSRDVLADLRAATGITYDDRQQGTLQVFRTQKQLDHIGDDLRVLDQY
QVPYEVLDTAGCIHAEPGLSGAREKIVGGLRLPGDETGDAFQFTQRLAAMAAERGVTFLYDTTIRALRREGGRITGVDTS
RGMLEADAYVLSLGSFSPAMVRALGLDLPIYPVKGYSITAPILDAARAPVSTVMDETFKIGITRLGDRIRVGGTAELAGF
STSLRAPRRATLEHSLTDLFAGAGDVPAATFWTGLRPMTPDGTPIVGRTEIGNLYLNTGHGTLGWTMACGSGRVLADIMS
GRTPDIAHEDLALARYR

Sequences:

>Translated_417_residues
MKIIILGSGVVGVSSAWYLAQVGHSVTVIDRQPGAGLETSFANAGQVSPGYSSPWAGPGVPLKAVRWLMMKNRPFVFWPM
PDIGQWRWLAQMLQNCTTAAYDRNKGRMVRLAEYSRDVLADLRAATGITYDDRQQGTLQVFRTQKQLDHIGDDLRVLDQY
QVPYEVLDTAGCIHAEPGLSGAREKIVGGLRLPGDETGDAFQFTQRLAAMAAERGVTFLYDTTIRALRREGGRITGVDTS
RGMLEADAYVLSLGSFSPAMVRALGLDLPIYPVKGYSITAPILDAARAPVSTVMDETFKIGITRLGDRIRVGGTAELAGF
STSLRAPRRATLEHSLTDLFAGAGDVPAATFWTGLRPMTPDGTPIVGRTEIGNLYLNTGHGTLGWTMACGSGRVLADIMS
GRTPDIAHEDLALARYR
>Mature_417_residues
MKIIILGSGVVGVSSAWYLAQVGHSVTVIDRQPGAGLETSFANAGQVSPGYSSPWAGPGVPLKAVRWLMMKNRPFVFWPM
PDIGQWRWLAQMLQNCTTAAYDRNKGRMVRLAEYSRDVLADLRAATGITYDDRQQGTLQVFRTQKQLDHIGDDLRVLDQY
QVPYEVLDTAGCIHAEPGLSGAREKIVGGLRLPGDETGDAFQFTQRLAAMAAERGVTFLYDTTIRALRREGGRITGVDTS
RGMLEADAYVLSLGSFSPAMVRALGLDLPIYPVKGYSITAPILDAARAPVSTVMDETFKIGITRLGDRIRVGGTAELAGF
STSLRAPRRATLEHSLTDLFAGAGDVPAATFWTGLRPMTPDGTPIVGRTEIGNLYLNTGHGTLGWTMACGSGRVLADIMS
GRTPDIAHEDLALARYR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=57.2115384615385, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45149; Mature: 45149

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGSGVVGVSSAWYLAQVGHSVTVIDRQPGAGLETSFANAGQVSPGYSSPWAGPGV
CEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAVRWLMMKNRPFVFWPMPDIGQWRWLAQMLQNCTTAAYDRNKGRMVRLAEYSRDVLA
CHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
DLRAATGITYDDRQQGTLQVFRTQKQLDHIGDDLRVLDQYQVPYEVLDTAGCIHAEPGLS
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCEECCCCCC
GAREKIVGGLRLPGDETGDAFQFTQRLAAMAAERGVTFLYDTTIRALRREGGRITGVDTS
HHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEECCCC
RGMLEADAYVLSLGSFSPAMVRALGLDLPIYPVKGYSITAPILDAARAPVSTVMDETFKI
CCCEECCEEEEEECCCCHHHHHHHCCCCCEEECCCCEEEHHHHHHHCCCHHHHHHHHHHH
GITRLGDRIRVGGTAELAGFSTSLRAPRRATLEHSLTDLFAGAGDVPAATFWTGLRPMTP
HHHHCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
DGTPIVGRTEIGNLYLNTGHGTLGWTMACGSGRVLADIMSGRTPDIAHEDLALARYR
CCCEEEEEEEECEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCHHCCHHHCCC
>Mature Secondary Structure
MKIIILGSGVVGVSSAWYLAQVGHSVTVIDRQPGAGLETSFANAGQVSPGYSSPWAGPGV
CEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAVRWLMMKNRPFVFWPMPDIGQWRWLAQMLQNCTTAAYDRNKGRMVRLAEYSRDVLA
CHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
DLRAATGITYDDRQQGTLQVFRTQKQLDHIGDDLRVLDQYQVPYEVLDTAGCIHAEPGLS
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCEECCCCCC
GAREKIVGGLRLPGDETGDAFQFTQRLAAMAAERGVTFLYDTTIRALRREGGRITGVDTS
HHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEECCCC
RGMLEADAYVLSLGSFSPAMVRALGLDLPIYPVKGYSITAPILDAARAPVSTVMDETFKI
CCCEECCEEEEEECCCCHHHHHHHCCCCCEEECCCCEEEHHHHHHHCCCHHHHHHHHHHH
GITRLGDRIRVGGTAELAGFSTSLRAPRRATLEHSLTDLFAGAGDVPAATFWTGLRPMTP
HHHHCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
DGTPIVGRTEIGNLYLNTGHGTLGWTMACGSGRVLADIMSGRTPDIAHEDLALARYR
CCCEEEEEEEECEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA