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The map label for this gene is ctrC [H]

Identifier: 162148193

GI number: 162148193

Start: 2498643

End: 2499443

Strand: Reverse

Name: ctrC [H]

Synonym: GDI_2410

Alternate gene names: 162148193

Gene position: 2499443-2498643 (Counterclockwise)

Preceding gene: 162148194

Following gene: 162148192

Centisome position: 63.37

GC content: 47.82

Gene sequence:

>801_bases
TTGAGTGTCAAGATGAACGGACCGTCCCTTTTTGTGCTGTTTCGAGTTCAGATGCGGGTGATCGGCGCATTGATGATGCG
TGAATTGCATACGCGGTTTGGACGAGAAAATTTGGGCTATTTGTGGATCGTCGGAGAGCCAATTCTGTTTTGCGCGGGTG
TTGCCGTCGTTTGGACCGCCATTCGGCCCGCGCATGAACATGGGTTGCCGACAACCGCTATTGTCGTGACGGGCTACGTT
CCGCTTACAATGTGGCGGCATTGTCTAGGCCATTCGCTTCATGCCTTTACAGCAAATGGGAGTCTTTTATTCCACCGGCA
GGTGACGCCGCTGGATCTTATTTTCACCCGGGTTAGTCTTGAGGTTATGGGCTCTTTAATTGCGGGTCTGATTGTGGCCG
TCGGGGCGATTATAATGGGTTTTATGAAGCCACCAGTTGATTACGGGTTGCTGTATTTAGGACTTTTTTTTCACGCCCTG
TTTTGTCTCGGAACAGGACTGCTCGTTGCATCCTTGTCAGAAATGTCAGAATTCCTGGAAAAAGGCGTCGGGATTATTTC
ATATCTGTCCTTGCCCCTGTCCGGGGCATTCTCAATGGTTGATTGGGTATCACCACGTTATCGCTGGATTTTGTTACTTT
CACCAAGTGTAAATGATATTGAAATGGTGCGTGGCGGACAGTTTGGTTATTCTGCGCATGCACATTTTAATGTGCTCTAT
AATAGCTGTGCGATTTTTATCATGATTCTTATAGGACTATCGCTGACACTTCGGGTGCGGCGTTATATATTGGTTCAATG
A

Upstream 100 bases:

>100_bases
CGAAGCGGATCAGTGACGTGCTGACCGTATTTGCGACATTCTTGGGGCTTTTCTTAATGGGCAAGTTGATCATCAGCGGT
GCGCGAGAGCATCAGATCGT

Downstream 100 bases:

>100_bases
TTCGGTGTATTGATCTCGTAAAAGACTATCATACACCCGGTGGAAAGCGGCGTGTGCTTGATCGTGTCAATTTCCAACTG
GATCGTGGGCAGAAGCTGGG

Product: capsule polysaccharide export inner-membrane protein ctrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSVKMNGPSLFVLFRVQMRVIGALMMRELHTRFGRENLGYLWIVGEPILFCAGVAVVWTAIRPAHEHGLPTTAIVVTGYV
PLTMWRHCLGHSLHAFTANGSLLFHRQVTPLDLIFTRVSLEVMGSLIAGLIVAVGAIIMGFMKPPVDYGLLYLGLFFHAL
FCLGTGLLVASLSEMSEFLEKGVGIISYLSLPLSGAFSMVDWVSPRYRWILLLSPSVNDIEMVRGGQFGYSAHAHFNVLY
NSCAIFIMILIGLSLTLRVRRYILVQ

Sequences:

>Translated_266_residues
MSVKMNGPSLFVLFRVQMRVIGALMMRELHTRFGRENLGYLWIVGEPILFCAGVAVVWTAIRPAHEHGLPTTAIVVTGYV
PLTMWRHCLGHSLHAFTANGSLLFHRQVTPLDLIFTRVSLEVMGSLIAGLIVAVGAIIMGFMKPPVDYGLLYLGLFFHAL
FCLGTGLLVASLSEMSEFLEKGVGIISYLSLPLSGAFSMVDWVSPRYRWILLLSPSVNDIEMVRGGQFGYSAHAHFNVLY
NSCAIFIMILIGLSLTLRVRRYILVQ
>Mature_265_residues
SVKMNGPSLFVLFRVQMRVIGALMMRELHTRFGRENLGYLWIVGEPILFCAGVAVVWTAIRPAHEHGLPTTAIVVTGYVP
LTMWRHCLGHSLHAFTANGSLLFHRQVTPLDLIFTRVSLEVMGSLIAGLIVAVGAIIMGFMKPPVDYGLLYLGLFFHALF
CLGTGLLVASLSEMSEFLEKGVGIISYLSLPLSGAFSMVDWVSPRYRWILLLSPSVNDIEMVRGGQFGYSAHAHFNVLYN
SCAIFIMILIGLSLTLRVRRYILVQ

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29533; Mature: 29402

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKMNGPSLFVLFRVQMRVIGALMMRELHTRFGRENLGYLWIVGEPILFCAGVAVVWTA
CEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
IRPAHEHGLPTTAIVVTGYVPLTMWRHCLGHSLHAFTANGSLLFHRQVTPLDLIFTRVSL
HCCHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
EVMGSLIAGLIVAVGAIIMGFMKPPVDYGLLYLGLFFHALFCLGTGLLVASLSEMSEFLE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVGIISYLSLPLSGAFSMVDWVSPRYRWILLLSPSVNDIEMVRGGQFGYSAHAHFNVLY
HCCHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHH
NSCAIFIMILIGLSLTLRVRRYILVQ
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVKMNGPSLFVLFRVQMRVIGALMMRELHTRFGRENLGYLWIVGEPILFCAGVAVVWTA
EEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
IRPAHEHGLPTTAIVVTGYVPLTMWRHCLGHSLHAFTANGSLLFHRQVTPLDLIFTRVSL
HCCHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
EVMGSLIAGLIVAVGAIIMGFMKPPVDYGLLYLGLFFHALFCLGTGLLVASLSEMSEFLE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVGIISYLSLPLSGAFSMVDWVSPRYRWILLLSPSVNDIEMVRGGQFGYSAHAHFNVLY
HCCHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHH
NSCAIFIMILIGLSLTLRVRRYILVQ
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]