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The map label for this gene is yjbJ [H]

Identifier: 162148172

GI number: 162148172

Start: 2464377

End: 2465684

Strand: Direct

Name: yjbJ [H]

Synonym: GDI_2389

Alternate gene names: 162148172

Gene position: 2464377-2465684 (Clockwise)

Preceding gene: 162148171

Following gene: 162148174

Centisome position: 62.48

GC content: 71.79

Gene sequence:

>1308_bases
ATGAAAATGGGGCAACATGGCATCATGACCCGACGTCTGACGCCACCGGACGATGCCGCCCCACCCGCCGCGCGCCGGCC
GCACGGCGGATACGGCGTCGTGATCGGCCTGTCGCTGCTGGGCGCGGCCGCGACGCTGGCGGCCTGCAGCACCGCGCCCG
GGTCACGCTATTCGCGCTATTATGCCCGCAACGGCGCCTACCGCGCCCCCGGCCCGGCCGAGGACCCATGGGGCCCGTAC
ATCGCCGAGGCCTCGGGCCGCTTCGCGGTGCCGCAGGAATGGATCCGCGCCGTCATCCAGCAGGAATCGGGCGGCCATGA
ATACCTGGACGGCCAGCCGATCACTTCCTCCGCCGGGGCGATGGGCCTGATGCAGTTGATGCCGCAGACCTATGCCGACA
TGCAGGACCAGAACACGCTCGGCCCCGACCCGTACGAACCGCACGACAATATCCTGGCCGGCACCGCCTATATCCGGCAG
ATGTACGACCGCTACGGCGCACCGGGATTCCTGGCGGCCTACAACGCCGGACCGCAGCGGCTGGACGATTATCTGCAGAC
CGGGCGGTCGCTGCCGAACGAGACGGTCAATTACCTGGCCTCGGTCACACCCAACCTGGGCAGCACCATCCCCCTCAGCG
GCCCGCTGGCGGCCTATGGCACCGGCACGCAGATGGTCTCGGCCACACCGACGCCCCTGCCGGTGGCCATGGCATCCGCC
GCACGGCCGGCCGGCCCCCGGCTGCCGGTCGTCGTCACGCCCACGATCGCCAACCCGACCGGCGGCCAGCCGATCCAGTA
CGCGGCCTATGTCCCGCCGCGCCCCCGTGCCGCGCGCTGCGCGCAGGACCCCAACGCGGCCTACGACCCCGACGCGCCCT
GCCTGCCCATGGTCAGCGGCCCGCCGCAACCTCTGCCGCCCCCGGCACCGGTGCTGCCGGCAGTCGTCACCGCCGCCACG
ATGCCGCCGGCCCCGTCCCGGATGGCGCCCATCGTTCCCGCGATCATTCATATTCCGCTCTCGGGCCGTGCCCTGCCGCC
TGACGGCGTGAATTACGGCCAATGGGCCATCCAGGTCGGCGCCTTCACTTCGGAGGGCCAGGCCCGCTTCGCCAACACGA
TGGCCCGCCAGGCCGCGTTCAACGCCCTGAATGGTGCCCGCGGCGTCGTGCAGCCCATCCCGTCGCCCGGCGGTCACGCC
GTCTATCGCGCGCGGCTGGCCGGCCTGGCGCAGAACAGCGCGGCCACGGCCTGCACCACCCTGCGGCAGCAGGGACTGGC
ATGCATGATCGTCCGGCCGGGGCATTAG

Upstream 100 bases:

>100_bases
GCGCTGCGGCGGGACTTGGCGGGGCTGTGCCTGATCTAGACGCCGCTGGCGAAGTCCCGGGAAATCAATACTCTGCGCAG
GAGAGCGATTGCGCGGACTC

Downstream 100 bases:

>100_bases
GTTTCCCCGGATTCTTCTACCCTTATTCGCTTTCGCTGTCGGGCAGCGCTCCGGGCACGTGCAGTTCCGGCAGGTGAACC
ATGGCCTGGCGGACCAGGTT

Product: lytic transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKMGQHGIMTRRLTPPDDAAPPAARRPHGGYGVVIGLSLLGAAATLAACSTAPGSRYSRYYARNGAYRAPGPAEDPWGPY
IAEASGRFAVPQEWIRAVIQQESGGHEYLDGQPITSSAGAMGLMQLMPQTYADMQDQNTLGPDPYEPHDNILAGTAYIRQ
MYDRYGAPGFLAAYNAGPQRLDDYLQTGRSLPNETVNYLASVTPNLGSTIPLSGPLAAYGTGTQMVSATPTPLPVAMASA
ARPAGPRLPVVVTPTIANPTGGQPIQYAAYVPPRPRAARCAQDPNAAYDPDAPCLPMVSGPPQPLPPPAPVLPAVVTAAT
MPPAPSRMAPIVPAIIHIPLSGRALPPDGVNYGQWAIQVGAFTSEGQARFANTMARQAAFNALNGARGVVQPIPSPGGHA
VYRARLAGLAQNSAATACTTLRQQGLACMIVRPGH

Sequences:

>Translated_435_residues
MKMGQHGIMTRRLTPPDDAAPPAARRPHGGYGVVIGLSLLGAAATLAACSTAPGSRYSRYYARNGAYRAPGPAEDPWGPY
IAEASGRFAVPQEWIRAVIQQESGGHEYLDGQPITSSAGAMGLMQLMPQTYADMQDQNTLGPDPYEPHDNILAGTAYIRQ
MYDRYGAPGFLAAYNAGPQRLDDYLQTGRSLPNETVNYLASVTPNLGSTIPLSGPLAAYGTGTQMVSATPTPLPVAMASA
ARPAGPRLPVVVTPTIANPTGGQPIQYAAYVPPRPRAARCAQDPNAAYDPDAPCLPMVSGPPQPLPPPAPVLPAVVTAAT
MPPAPSRMAPIVPAIIHIPLSGRALPPDGVNYGQWAIQVGAFTSEGQARFANTMARQAAFNALNGARGVVQPIPSPGGHA
VYRARLAGLAQNSAATACTTLRQQGLACMIVRPGH
>Mature_435_residues
MKMGQHGIMTRRLTPPDDAAPPAARRPHGGYGVVIGLSLLGAAATLAACSTAPGSRYSRYYARNGAYRAPGPAEDPWGPY
IAEASGRFAVPQEWIRAVIQQESGGHEYLDGQPITSSAGAMGLMQLMPQTYADMQDQNTLGPDPYEPHDNILAGTAYIRQ
MYDRYGAPGFLAAYNAGPQRLDDYLQTGRSLPNETVNYLASVTPNLGSTIPLSGPLAAYGTGTQMVSATPTPLPVAMASA
ARPAGPRLPVVVTPTIANPTGGQPIQYAAYVPPRPRAARCAQDPNAAYDPDAPCLPMVSGPPQPLPPPAPVLPAVVTAAT
MPPAPSRMAPIVPAIIHIPLSGRALPPDGVNYGQWAIQVGAFTSEGQARFANTMARQAAFNALNGARGVVQPIPSPGGHA
VYRARLAGLAQNSAATACTTLRQQGLACMIVRPGH

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 45388; Mature: 45388

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMGQHGIMTRRLTPPDDAAPPAARRPHGGYGVVIGLSLLGAAATLAACSTAPGSRYSRY
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH
YARNGAYRAPGPAEDPWGPYIAEASGRFAVPQEWIRAVIQQESGGHEYLDGQPITSSAGA
HHCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
MGLMQLMPQTYADMQDQNTLGPDPYEPHDNILAGTAYIRQMYDRYGAPGFLAAYNAGPQR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCHHH
LDDYLQTGRSLPNETVNYLASVTPNLGSTIPLSGPLAAYGTGTQMVSATPTPLPVAMASA
HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCHHHHHHC
ARPAGPRLPVVVTPTIANPTGGQPIQYAAYVPPRPRAARCAQDPNAAYDPDAPCLPMVSG
CCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
PPQPLPPPAPVLPAVVTAATMPPAPSRMAPIVPAIIHIPLSGRALPPDGVNYGQWAIQVG
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE
AFTSEGQARFANTMARQAAFNALNGARGVVQPIPSPGGHAVYRARLAGLAQNSAATACTT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
LRQQGLACMIVRPGH
HHHCCCEEEEEECCC
>Mature Secondary Structure
MKMGQHGIMTRRLTPPDDAAPPAARRPHGGYGVVIGLSLLGAAATLAACSTAPGSRYSRY
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH
YARNGAYRAPGPAEDPWGPYIAEASGRFAVPQEWIRAVIQQESGGHEYLDGQPITSSAGA
HHCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
MGLMQLMPQTYADMQDQNTLGPDPYEPHDNILAGTAYIRQMYDRYGAPGFLAAYNAGPQR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCHHH
LDDYLQTGRSLPNETVNYLASVTPNLGSTIPLSGPLAAYGTGTQMVSATPTPLPVAMASA
HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCHHHHHHC
ARPAGPRLPVVVTPTIANPTGGQPIQYAAYVPPRPRAARCAQDPNAAYDPDAPCLPMVSG
CCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
PPQPLPPPAPVLPAVVTAATMPPAPSRMAPIVPAIIHIPLSGRALPPDGVNYGQWAIQVG
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE
AFTSEGQARFANTMARQAAFNALNGARGVVQPIPSPGGHAVYRARLAGLAQNSAATACTT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
LRQQGLACMIVRPGH
HHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]