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The map label for this gene is ydhP [H]

Identifier: 162148174

GI number: 162148174

Start: 2467831

End: 2469003

Strand: Direct

Name: ydhP [H]

Synonym: GDI_2391

Alternate gene names: 162148174

Gene position: 2467831-2469003 (Clockwise)

Preceding gene: 162148172

Following gene: 162148175

Centisome position: 62.57

GC content: 70.67

Gene sequence:

>1173_bases
TTGGAATCCCCCCTCGTGCCCCTGCCCCTTCTCGCGCTCGCGCTCGCCTCGTTCGGAATCGGAACGACCGAATTCGTCAT
CATGGGGTTGCTGCCCCAGCTGGCCGACAATCTGGGCGTGTCGATCCCCGCCGCCGGGCAACTCGTCTCGGGCTATGCGC
TGGGGGTGACGGTGGGGGCGCCGATCGTGGCGGTCGCGACCGCGCCCCTGCGCCGCAAGACCGCCCTGCTGGTCCTGATG
GCCATGTTCATCGTCGGTAATTTCTGCTGCGCCGTCGCGCCCACCTACCTGCTGCTGATGGCGGCGCGGGTCATGACCGC
CTTCTGTCACGGGGCCTTCTTCGGCACCGCGGCCATCGTGGCGGCCGACCTGGTTCCGCGCAACAAGCGGGCGCAGGCCC
TGTCCCTGGTGTTCGCCGGCCTGACCCTGGCCAACGTGTTCGGCGTCCCGTTCGGCACCGCGCTGGGCCAGTGGGCGGGG
TGGCGCGCGACCTTCTGGGCGGTCTGCGCCATCGGGGTCGTGGCGCTGCTGGCCATCGTCGTGCTGGTGCCGGGCGGGGA
CGACCACGCCCCGGCCCGCGTGCTGGCGGAACTGCGCGTGCTGCGCCGGCGGCAGGTCCTGCTGACCATGCTGATCTCGA
CCATGTGCTCCGCCAGCCTGTTCAGCGTCTTTACCTACATCACCCCGCTGCTGCAGATCCGGGCCGGCCTGTCGCCGCAG
ATGGTCACGGTGGCGCTGCTGCTGTTCGGGGCGGGCATCACCATCGGCAACCTGGCCGGCGGCCGCCTGGCGGACTGGGT
GCTGCTGCCTTCGGTCATCATGGCGCTGGTGGCGTCGATCGTGGTGCTGGTGGCGTTCGTCGAAACCAGCCATTTCGCCG
TCGCCTCCATGGCCACGCTGTTCCTGTGGGGCATCATCGTGTTCGCGCTGGTCCCGCCCCTGCAATATCGCGTCGTGCAG
CAGGCGGCCGAGGCCCCGAACATGGCCTCGACCCTCAACCAGGGCGCCTTCAACCTGGGCAACGCGGTGGGGGCGTGGAT
CGGCGGGCTGGTCGTGTCCTCGCCCTGGTCCTATGGCGCGCTGCCGGTCGTGGGCGCGGTGCTGGCGCTGGCGGCGCTGC
TGCTGGTCCTGTGGGCGCAGGCCGCCGAACGCGGTACGGTGGCCGCACGCTAG

Upstream 100 bases:

>100_bases
ACACCGCCTTCGATCACGGCGCCGCATGATGTCTCTTTTCAAGCAGGCCGGAACAGGGAAGAAGGGATTTTGCATCTCCA
TTGCGTGATGGCCATCTTTT

Downstream 100 bases:

>100_bases
AGAAAATGTCCTGCCGACTTGGCGGGGCTGGCAGGCCGGGATATGAAGACGGCATCGAAACCGGCTGGAACCTGGCCCGA
CCGCCGGCCCCGGCCGGGCG

Product: major facilitator transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MESPLVPLPLLALALASFGIGTTEFVIMGLLPQLADNLGVSIPAAGQLVSGYALGVTVGAPIVAVATAPLRRKTALLVLM
AMFIVGNFCCAVAPTYLLLMAARVMTAFCHGAFFGTAAIVAADLVPRNKRAQALSLVFAGLTLANVFGVPFGTALGQWAG
WRATFWAVCAIGVVALLAIVVLVPGGDDHAPARVLAELRVLRRRQVLLTMLISTMCSASLFSVFTYITPLLQIRAGLSPQ
MVTVALLLFGAGITIGNLAGGRLADWVLLPSVIMALVASIVVLVAFVETSHFAVASMATLFLWGIIVFALVPPLQYRVVQ
QAAEAPNMASTLNQGAFNLGNAVGAWIGGLVVSSPWSYGALPVVGAVLALAALLLVLWAQAAERGTVAAR

Sequences:

>Translated_390_residues
MESPLVPLPLLALALASFGIGTTEFVIMGLLPQLADNLGVSIPAAGQLVSGYALGVTVGAPIVAVATAPLRRKTALLVLM
AMFIVGNFCCAVAPTYLLLMAARVMTAFCHGAFFGTAAIVAADLVPRNKRAQALSLVFAGLTLANVFGVPFGTALGQWAG
WRATFWAVCAIGVVALLAIVVLVPGGDDHAPARVLAELRVLRRRQVLLTMLISTMCSASLFSVFTYITPLLQIRAGLSPQ
MVTVALLLFGAGITIGNLAGGRLADWVLLPSVIMALVASIVVLVAFVETSHFAVASMATLFLWGIIVFALVPPLQYRVVQ
QAAEAPNMASTLNQGAFNLGNAVGAWIGGLVVSSPWSYGALPVVGAVLALAALLLVLWAQAAERGTVAAR
>Mature_390_residues
MESPLVPLPLLALALASFGIGTTEFVIMGLLPQLADNLGVSIPAAGQLVSGYALGVTVGAPIVAVATAPLRRKTALLVLM
AMFIVGNFCCAVAPTYLLLMAARVMTAFCHGAFFGTAAIVAADLVPRNKRAQALSLVFAGLTLANVFGVPFGTALGQWAG
WRATFWAVCAIGVVALLAIVVLVPGGDDHAPARVLAELRVLRRRQVLLTMLISTMCSASLFSVFTYITPLLQIRAGLSPQ
MVTVALLLFGAGITIGNLAGGRLADWVLLPSVIMALVASIVVLVAFVETSHFAVASMATLFLWGIIVFALVPPLQYRVVQ
QAAEAPNMASTLNQGAFNLGNAVGAWIGGLVVSSPWSYGALPVVGAVLALAALLLVLWAQAAERGTVAAR

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=381, Percent_Identity=45.4068241469816, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1786595, Length=366, Percent_Identity=34.6994535519126, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1787808, Length=376, Percent_Identity=31.9148936170213, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693198, Length=357, Percent_Identity=27.1708683473389, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40424; Mature: 40424

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPLVPLPLLALALASFGIGTTEFVIMGLLPQLADNLGVSIPAAGQLVSGYALGVTVGA
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PIVAVATAPLRRKTALLVLMAMFIVGNFCCAVAPTYLLLMAARVMTAFCHGAFFGTAAIV
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADLVPRNKRAQALSLVFAGLTLANVFGVPFGTALGQWAGWRATFWAVCAIGVVALLAIV
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLVPGGDDHAPARVLAELRVLRRRQVLLTMLISTMCSASLFSVFTYITPLLQIRAGLSPQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVTVALLLFGAGITIGNLAGGRLADWVLLPSVIMALVASIVVLVAFVETSHFAVASMATL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLWGIIVFALVPPLQYRVVQQAAEAPNMASTLNQGAFNLGNAVGAWIGGLVVSSPWSYGA
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
LPVVGAVLALAALLLVLWAQAAERGTVAAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MESPLVPLPLLALALASFGIGTTEFVIMGLLPQLADNLGVSIPAAGQLVSGYALGVTVGA
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PIVAVATAPLRRKTALLVLMAMFIVGNFCCAVAPTYLLLMAARVMTAFCHGAFFGTAAIV
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADLVPRNKRAQALSLVFAGLTLANVFGVPFGTALGQWAGWRATFWAVCAIGVVALLAIV
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLVPGGDDHAPARVLAELRVLRRRQVLLTMLISTMCSASLFSVFTYITPLLQIRAGLSPQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVTVALLLFGAGITIGNLAGGRLADWVLLPSVIMALVASIVVLVAFVETSHFAVASMATL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLWGIIVFALVPPLQYRVVQQAAEAPNMASTLNQGAFNLGNAVGAWIGGLVVSSPWSYGA
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
LPVVGAVLALAALLLVLWAQAAERGTVAAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]