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The map label for this gene is 162148148

Identifier: 162148148

GI number: 162148148

Start: 2440179

End: 2441177

Strand: Reverse

Name: 162148148

Synonym: GDI_2365

Alternate gene names: NA

Gene position: 2441177-2440179 (Counterclockwise)

Preceding gene: 162148149

Following gene: 162148147

Centisome position: 61.89

GC content: 69.47

Gene sequence:

>999_bases
ATGATCGCCGGCCACGTCACCGGTTGTGTCGCCTGCCGTGACAGCCGCAAGTTCGGCTGGGCCACCGCCGAGGGCGACAT
CGTGCTGGGCGCACGCGAGGATTTCGCAAACGCCGCCGTATGGCAGGTGCAGACGGTGCATGACGGGGCGATCCTGTCCC
TGGCGCCGAATGCCGCCCCGGCGGGGTTCCTGACCGGGGGCGACGACAGCACGCTGCGTCGGATCGGCGCCGATGGCGCG
GTCACCGACCTGGTGCGTGGCCGCCGCTGGGTCGAGCATGTGAGCAGTTGGGCGGACGGAAAGTCCGGCGTGATCGCGTT
CGCGTCGGGCAAGCAGGTGGAACTGCGCGACGCCACGGGGGCGACGACCCTGAAGGTGCTGGAGCACCCCTCGACCGTCA
GCGGCATCGTGTTCGATGCCAAGGGCAAGCGGATCGCGGCCTCGCATTACAATGGCGCGTCGCTGTGGTTCGTCCATGCC
AAGGTCGATACCCCCCGGCGCCTGGAATGGAAGGGGAGCCATACCGGCATCGCGATCCATCCGGGCGGCGAGGCGCTGGT
GACCAGCATGCAGGAAAACGACCTGCATGGCTGGCGCCTGTCCGACGGGCACAACATGCGCATGAGCGGCTATCCGCACA
AAGTGCAGTCCATGGCGTTCTCGCGCACCGGCAAATGGCTGGTGACCAGCGGGGCGGACAGCGTGGTGATGTGGCCGTTC
TTCGGCGGCGGCCCGATGGGCAAGCCGCCGTCGGAACTGGCAGGGGTGCCCGGTGTCATCTGCCGGCGCGTCGCCTGCCA
TCCGGTGCACGAGATCGTCGCCGCGGGGTTCGAAGACGGCACCGTGCTGCTGGAGGATGCGGCGGCGCAGCGGGTATTGC
CGGTACGCGGCGCCGGTGGCGGCGCGATCTCCGCCCTGGCCTTCACCCCCGACGGCTGCGCCCTGGCCTTCGGGACCGAG
GACGGGGGGATCGGAATCGTCGATCTGGCGGCACGCTAA

Upstream 100 bases:

>100_bases
CCTGCGTCGCGGCTTCGAAAGCTGCCGCGCGCAATGAGCTGCGCGGGGATGGCCGGCAACGCGCCGGCGGGACTGTCTGG
AGACGCGCCGCCGGGTAAGG

Downstream 100 bases:

>100_bases
GGGGCAGGGGGCAGGGGGCAGGGGGCAGGGTCGACGGACTGTCTCCCCTGCCATTCCCTCCCGGAGCTTGAATTTTCGAC
TGTGCGCCGATAGGTGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: WD-40 Repeat Protein; WD-40 Repeat-Containing G-Protein; WD Repeat-Containing Protein; WD-Repeat Family Protein; G- Repeat Protein; Beta WD-40 Repeat-Containing G-Protein; YD Repeat Protein; WD40 Repeat Subgroup; Vegetatible Incompatibility; Wd-40 Repeat Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIAGHVTGCVACRDSRKFGWATAEGDIVLGAREDFANAAVWQVQTVHDGAILSLAPNAAPAGFLTGGDDSTLRRIGADGA
VTDLVRGRRWVEHVSSWADGKSGVIAFASGKQVELRDATGATTLKVLEHPSTVSGIVFDAKGKRIAASHYNGASLWFVHA
KVDTPRRLEWKGSHTGIAIHPGGEALVTSMQENDLHGWRLSDGHNMRMSGYPHKVQSMAFSRTGKWLVTSGADSVVMWPF
FGGGPMGKPPSELAGVPGVICRRVACHPVHEIVAAGFEDGTVLLEDAAAQRVLPVRGAGGGAISALAFTPDGCALAFGTE
DGGIGIVDLAAR

Sequences:

>Translated_332_residues
MIAGHVTGCVACRDSRKFGWATAEGDIVLGAREDFANAAVWQVQTVHDGAILSLAPNAAPAGFLTGGDDSTLRRIGADGA
VTDLVRGRRWVEHVSSWADGKSGVIAFASGKQVELRDATGATTLKVLEHPSTVSGIVFDAKGKRIAASHYNGASLWFVHA
KVDTPRRLEWKGSHTGIAIHPGGEALVTSMQENDLHGWRLSDGHNMRMSGYPHKVQSMAFSRTGKWLVTSGADSVVMWPF
FGGGPMGKPPSELAGVPGVICRRVACHPVHEIVAAGFEDGTVLLEDAAAQRVLPVRGAGGGAISALAFTPDGCALAFGTE
DGGIGIVDLAAR
>Mature_332_residues
MIAGHVTGCVACRDSRKFGWATAEGDIVLGAREDFANAAVWQVQTVHDGAILSLAPNAAPAGFLTGGDDSTLRRIGADGA
VTDLVRGRRWVEHVSSWADGKSGVIAFASGKQVELRDATGATTLKVLEHPSTVSGIVFDAKGKRIAASHYNGASLWFVHA
KVDTPRRLEWKGSHTGIAIHPGGEALVTSMQENDLHGWRLSDGHNMRMSGYPHKVQSMAFSRTGKWLVTSGADSVVMWPF
FGGGPMGKPPSELAGVPGVICRRVACHPVHEIVAAGFEDGTVLLEDAAAQRVLPVRGAGGGAISALAFTPDGCALAFGTE
DGGIGIVDLAAR

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83779014, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34707; Mature: 34707

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGHVTGCVACRDSRKFGWATAEGDIVLGAREDFANAAVWQVQTVHDGAILSLAPNAAP
CCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCC
AGFLTGGDDSTLRRIGADGAVTDLVRGRRWVEHVSSWADGKSGVIAFASGKQVELRDATG
CCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCC
ATTLKVLEHPSTVSGIVFDAKGKRIAASHYNGASLWFVHAKVDTPRRLEWKGSHTGIAIH
CEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCEEEECCCCCEEEEC
PGGEALVTSMQENDLHGWRLSDGHNMRMSGYPHKVQSMAFSRTGKWLVTSGADSVVMWPF
CCCHHEEEECCCCCCCCEEECCCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCEEEEEE
FGGGPMGKPPSELAGVPGVICRRVACHPVHEIVAAGFEDGTVLLEDAAAQRVLPVRGAGG
ECCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCEEEEECCCC
GAISALAFTPDGCALAFGTEDGGIGIVDLAAR
CEEEEEEECCCCEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MIAGHVTGCVACRDSRKFGWATAEGDIVLGAREDFANAAVWQVQTVHDGAILSLAPNAAP
CCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCC
AGFLTGGDDSTLRRIGADGAVTDLVRGRRWVEHVSSWADGKSGVIAFASGKQVELRDATG
CCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCC
ATTLKVLEHPSTVSGIVFDAKGKRIAASHYNGASLWFVHAKVDTPRRLEWKGSHTGIAIH
CEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCEEEECCCCCEEEEC
PGGEALVTSMQENDLHGWRLSDGHNMRMSGYPHKVQSMAFSRTGKWLVTSGADSVVMWPF
CCCHHEEEECCCCCCCCEEECCCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCEEEEEE
FGGGPMGKPPSELAGVPGVICRRVACHPVHEIVAAGFEDGTVLLEDAAAQRVLPVRGAGG
ECCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCEEEEECCCC
GAISALAFTPDGCALAFGTEDGGIGIVDLAAR
CEEEEEEECCCCEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA