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The map label for this gene is yjiA [H]

Identifier: 162148149

GI number: 162148149

Start: 2441241

End: 2442263

Strand: Reverse

Name: yjiA [H]

Synonym: GDI_2366

Alternate gene names: 162148149

Gene position: 2442263-2441241 (Counterclockwise)

Preceding gene: 162148150

Following gene: 162148148

Centisome position: 61.92

GC content: 67.84

Gene sequence:

>1023_bases
CTGGTGCCGGTGACGGTGCTGACGGGCTTTCTCGGCGCGGGCAAGACCACGCTGCTCAACCATATCCTGACGGCGGAGCA
CGGGCGCAAATACGCCGTGGTGATCAACGAGTTCGGGGAACTCGGCGTGGACAACGACCTCGTGGTGGATGCCGACGAGG
AAGTGTTCGAGATGAACAACGGCTGCATCTGCTGCACCGTGCGGGGCGACCTGATCCGCATCCTGGGCAGCCTGATGAAG
CGGCGCGGGAAGTTCGACGGCATCATCGTCGAGACCACCGGCCTGGCTGACCCCGCACCCGTGGCGCAGACCTTCTTCGT
CGACGAGGACGTGCGCGGCAAGACGCGCCTGGACGCCGTCGTGACCGTCGTGGACGCGATGAACGTGCTGCAGACGCTGG
ACGAAAGCCCCGAGGCGGTGAACCAGATCGCCTTCGCCGACGTCATCATCCTGAACAAGACCGACCTGGTGGACGAGGCC
GCGATCGCGGCCCGTCGCGCACGGCGATCAACGCGGTGGCGCGCCTGCACCGGGCCCAGCGCGGCGACGTCGCGCCCGAT
CGTGCTGGACCAGGGCGGCTTCGACCTGGCCCGCGCGCTGGAGCACGCGCACGCGCTTCGTGGAGTACACCCAGCCCATT
CGCACGAGGAAAACGTGACCTCGATGTCCTATGTGGTGGAGGAACCGCTGGATGCGGCGAAGTTCCAGGCCTGGATCGGC
GCGTTGCTGCGAACAGGGGGCCGACAGTGGTGGAGGAACCGCTGGATGCGGCGAAGTTGGCGGGCCTGGATCGGCGCGTT
GCTGCAGGCCCAGGGGGCCGACATCCTGCGCGCCAAGGGCATCCTGAACTATGCGGGCGAGAACCGGCGCTTCGCCTTCC
AGGCCGTGCACATGATGGCCGATGGCGGCTTCATCGGTCCGTGGAAGGAAGGCGACGCCCGCGATGCCCGCCTGGTCTTC
GCCGGCCGCAACCTCAACCGCCCGCGCCTGCGTCGCGGCTTCGAAAGCTGCCGCGCGCAATGA

Upstream 100 bases:

>100_bases
GGCGGGCGGGTGGGCCTATATGCAGGAACGAATGGATACAGGGACAGGAGACGACATGTCTGAAACCCAAGCGGCGCTCC
AGCCGAAAGACGGTGATGGG

Downstream 100 bases:

>100_bases
GCTGCGCGGGGATGGCCGGCAACGCGCCGGCGGGACTGTCTGGAGACGCGCCGCCGGGTAAGGATGATCGCCGGCCACGT
CACCGGTTGTGTCGCCTGCC

Product: cobalamin synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MVPVTVLTGFLGAGKTTLLNHILTAEHGRKYAVVINEFGELGVDNDLVVDADEEVFEMNNGCICCTVRGDLIRILGSLMK
RRGKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTRLDAVVTVVDAMNVLQTLDESPEAVNQIAFADVIILNKTDLVDEA
AIAARRARRSTRWRACTGPSAATSRPIVLDQGGFDLARALEHAHALRGVHPAHSHEENVTSMSYVVEEPLDAAKFQAWIG
ALLRTGGRQWWRNRWMRRSWRAWIGALLQAQGADILRAKGILNYAGENRRFAFQAVHMMADGGFIGPWKEGDARDARLVF
AGRNLNRPRLRRGFESCRAQ

Sequences:

>Translated_340_residues
MVPVTVLTGFLGAGKTTLLNHILTAEHGRKYAVVINEFGELGVDNDLVVDADEEVFEMNNGCICCTVRGDLIRILGSLMK
RRGKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTRLDAVVTVVDAMNVLQTLDESPEAVNQIAFADVIILNKTDLVDEA
AIAARRARRSTRWRACTGPSAATSRPIVLDQGGFDLARALEHAHALRGVHPAHSHEENVTSMSYVVEEPLDAAKFQAWIG
ALLRTGGRQWWRNRWMRRSWRAWIGALLQAQGADILRAKGILNYAGENRRFAFQAVHMMADGGFIGPWKEGDARDARLVF
AGRNLNRPRLRRGFESCRAQ
>Mature_340_residues
MVPVTVLTGFLGAGKTTLLNHILTAEHGRKYAVVINEFGELGVDNDLVVDADEEVFEMNNGCICCTVRGDLIRILGSLMK
RRGKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTRLDAVVTVVDAMNVLQTLDESPEAVNQIAFADVIILNKTDLVDEA
AIAARRARRSTRWRACTGPSAATSRPIVLDQGGFDLARALEHAHALRGVHPAHSHEENVTSMSYVVEEPLDAAKFQAWIG
ALLRTGGRQWWRNRWMRRSWRAWIGALLQAQGADILRAKGILNYAGENRRFAFQAVHMMADGGFIGPWKEGDARDARLVF
AGRNLNRPRLRRGFESCRAQ

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=351, Percent_Identity=33.9031339031339, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI126722884, Length=351, Percent_Identity=33.9031339031339, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI148727351, Length=351, Percent_Identity=33.6182336182336, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI146231952, Length=351, Percent_Identity=33.6182336182336, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI223941779, Length=345, Percent_Identity=33.6231884057971, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI223941776, Length=341, Percent_Identity=33.1378299120235, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI119120938, Length=340, Percent_Identity=30.2941176470588, Blast_Score=147, Evalue=1e-35,
Organism=Escherichia coli, GI87082430, Length=343, Percent_Identity=32.3615160349854, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788499, Length=165, Percent_Identity=35.1515151515151, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324356, Length=225, Percent_Identity=29.3333333333333, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 37600; Mature: 37600

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPVTVLTGFLGAGKTTLLNHILTAEHGRKYAVVINEFGELGVDNDLVVDADEEVFEMNN
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCCEEECCCHHHHHCCC
GCICCTVRGDLIRILGSLMKRRGKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTRLDAV
CEEEEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHEEEECCCCCCCHHHHHH
VTVVDAMNVLQTLDESPEAVNQIAFADVIILNKTDLVDEAAIAARRARRSTRWRACTGPS
HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCC
AATSRPIVLDQGGFDLARALEHAHALRGVHPAHSHEENVTSMSYVVEEPLDAAKFQAWIG
CCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ALLRTGGRQWWRNRWMRRSWRAWIGALLQAQGADILRAKGILNYAGENRRFAFQAVHMMA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
DGGFIGPWKEGDARDARLVFAGRNLNRPRLRRGFESCRAQ
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVPVTVLTGFLGAGKTTLLNHILTAEHGRKYAVVINEFGELGVDNDLVVDADEEVFEMNN
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCCEEECCCHHHHHCCC
GCICCTVRGDLIRILGSLMKRRGKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTRLDAV
CEEEEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHEEEECCCCCCCHHHHHH
VTVVDAMNVLQTLDESPEAVNQIAFADVIILNKTDLVDEAAIAARRARRSTRWRACTGPS
HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCC
AATSRPIVLDQGGFDLARALEHAHALRGVHPAHSHEENVTSMSYVVEEPLDAAKFQAWIG
CCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ALLRTGGRQWWRNRWMRRSWRAWIGALLQAQGADILRAKGILNYAGENRRFAFQAVHMMA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
DGGFIGPWKEGDARDARLVFAGRNLNRPRLRRGFESCRAQ
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]