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The map label for this gene is scpA [H]

Identifier: 162148007

GI number: 162148007

Start: 2278079

End: 2278924

Strand: Reverse

Name: scpA [H]

Synonym: GDI_2223

Alternate gene names: 162148007

Gene position: 2278924-2278079 (Counterclockwise)

Preceding gene: 162148008

Following gene: 162148006

Centisome position: 57.78

GC content: 71.63

Gene sequence:

>846_bases
CTGCCCGATGGCCTGCCGGGGGGCCTGACCGCGCCCATGCTGCGCCTGGAGGGGTTCGAGGGACCGCTGGACCTGCTGCT
GGAACTGGCGCGGGCGCAGAAGGTCGACCTGGCACGGATTTCGATCCTGCAACTGGTCGAGCAATATCTGGCGATCGTGG
AATCCGCCCGGCGCATCCGCCTGGAACTGGCGGCGGACTGGCTGGTGATGGCGGCGTGGCTGGCCTGGCTGAAATCGCGC
CTGCTGCTGCCGGCCGAGGAGGGCGAGGCCGTCGATGCCGAGGAAGCGGCCGAACTGCTGCAGGCCCGGCTGCTGGAACT
GGCGCGGATCGGCCGGGCGGCGGAATGGCTGGCGGCGCGGCCGCAACTGGGCCGTGACGTCTTCGCCCGGGGCGAGCGCG
AGGACCTGACGGAAATCGATCGCTCGGGTCTGGCGCTGGACCTGCCCCAACTGATGGGCGCCTATATGGCGGCCATGCGG
CGCGGCGCGCGCAAGCGCGTCTATCAGCCCCGGCGGCTGAATTTCTGGACGGTGCAGGATGCGCTGGCCCGCCTGCACCG
CCTGCTGGGCACCGACATCGTCCCCGGCACCGGCTGGTGCGATCTGGGCGCGTTCCTGCCGGACTCCGGCCCGGGCCTGG
ATGGCGGGGACGAGGACGAACGGCTGCGGCTGCGTCGGGCCGCGATGGCCGGCACCCTGATCGCCGGGCTGGAACTGGCG
CGCAGCGGCAGCATCGAACTGCGCCAGGACGAACAGTTCGGCCGGATCATGCTGCGCCCCTGCACGGCCGACGATGCGGC
CGAGGACGCGGGCGAGGATATGGACAGGATGGACGCGGCGGAATGA

Upstream 100 bases:

>100_bases
GGCCTGGCCTGTACCCTGGCGGGCTTCTAGGACCCGGCCCATGCAGCCGGACGCGGTACAGGGGGGGGCGGCCGTCGGGC
CGGGCGGTCAGGATGGCGGG

Downstream 100 bases:

>100_bases
CCGACACACCCCTTCCCGAAACCACGGTCCGGGCGGACCCCGCGTCGGTGCGGCTGGTCGAGGCCCTGATCTTCGCCAGC
CCCGACCCGGTGTCCGAACG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MPDGLPGGLTAPMLRLEGFEGPLDLLLELARAQKVDLARISILQLVEQYLAIVESARRIRLELAADWLVMAAWLAWLKSR
LLLPAEEGEAVDAEEAAELLQARLLELARIGRAAEWLAARPQLGRDVFARGEREDLTEIDRSGLALDLPQLMGAYMAAMR
RGARKRVYQPRRLNFWTVQDALARLHRLLGTDIVPGTGWCDLGAFLPDSGPGLDGGDEDERLRLRRAAMAGTLIAGLELA
RSGSIELRQDEQFGRIMLRPCTADDAAEDAGEDMDRMDAAE

Sequences:

>Translated_281_residues
MPDGLPGGLTAPMLRLEGFEGPLDLLLELARAQKVDLARISILQLVEQYLAIVESARRIRLELAADWLVMAAWLAWLKSR
LLLPAEEGEAVDAEEAAELLQARLLELARIGRAAEWLAARPQLGRDVFARGEREDLTEIDRSGLALDLPQLMGAYMAAMR
RGARKRVYQPRRLNFWTVQDALARLHRLLGTDIVPGTGWCDLGAFLPDSGPGLDGGDEDERLRLRRAAMAGTLIAGLELA
RSGSIELRQDEQFGRIMLRPCTADDAAEDAGEDMDRMDAAE
>Mature_280_residues
PDGLPGGLTAPMLRLEGFEGPLDLLLELARAQKVDLARISILQLVEQYLAIVESARRIRLELAADWLVMAAWLAWLKSRL
LLPAEEGEAVDAEEAAELLQARLLELARIGRAAEWLAARPQLGRDVFARGEREDLTEIDRSGLALDLPQLMGAYMAAMRR
GARKRVYQPRRLNFWTVQDALARLHRLLGTDIVPGTGWCDLGAFLPDSGPGLDGGDEDERLRLRRAAMAGTLIAGLELAR
SGSIELRQDEQFGRIMLRPCTADDAAEDAGEDMDRMDAAE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31019; Mature: 30888

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGLPGGLTAPMLRLEGFEGPLDLLLELARAQKVDLARISILQLVEQYLAIVESARRIR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELAADWLVMAAWLAWLKSRLLLPAEEGEAVDAEEAAELLQARLLELARIGRAAEWLAAR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PQLGRDVFARGEREDLTEIDRSGLALDLPQLMGAYMAAMRRGARKRVYQPRRLNFWTVQD
CCCCHHHHHCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ALARLHRLLGTDIVPGTGWCDLGAFLPDSGPGLDGGDEDERLRLRRAAMAGTLIAGLELA
HHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RSGSIELRQDEQFGRIMLRPCTADDAAEDAGEDMDRMDAAE
CCCCCEECCCHHHCCEEECCCCCCHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
PDGLPGGLTAPMLRLEGFEGPLDLLLELARAQKVDLARISILQLVEQYLAIVESARRIR
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELAADWLVMAAWLAWLKSRLLLPAEEGEAVDAEEAAELLQARLLELARIGRAAEWLAAR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PQLGRDVFARGEREDLTEIDRSGLALDLPQLMGAYMAAMRRGARKRVYQPRRLNFWTVQD
CCCCHHHHHCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ALARLHRLLGTDIVPGTGWCDLGAFLPDSGPGLDGGDEDERLRLRRAAMAGTLIAGLELA
HHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RSGSIELRQDEQFGRIMLRPCTADDAAEDAGEDMDRMDAAE
CCCCCEECCCHHHCCEEECCCCCCHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]