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The map label for this gene is scpB [H]

Identifier: 162148006

GI number: 162148006

Start: 2277387

End: 2278082

Strand: Reverse

Name: scpB [H]

Synonym: GDI_2222

Alternate gene names: 162148006

Gene position: 2278082-2277387 (Counterclockwise)

Preceding gene: 162148007

Following gene: 162148005

Centisome position: 57.76

GC content: 73.13

Gene sequence:

>696_bases
ATGACCGACACACCCCTTCCCGAAACCACGGTCCGGGCGGACCCCGCGTCGGTGCGGCTGGTCGAGGCCCTGATCTTCGC
CAGCCCCGACCCGGTGTCCGAACGCGCGATCGCCGAACTGCTGGAGGCCCAGGGCCAGGTGCCCGCCGACATCGATGACC
TGGGCGCCTATGTCCGCAGCGTGATCGACGCGGTGGTGGCGCTGTATGACGGAAGGGGCGTGGCGCCGGTGCTGATCGCC
GGGGGCTGGCAGTTCCGCACCGCCGCCGACCTGGCCCCGCGGCTGACGCGGGTGCTGCACCGCCCGCGCCGGCTGGCCCG
CGCGACGCTCGAAACCCTGGCCATCATCGCCTACCACCAGCCCTGCACCCGCGCGGAAATCGAGGAGATCCGCGGCGTCT
CGCTCAGCCAGCAGGTGCTGGACACCCTGCTGGAGGCCTCGCTGATCGTCCCGCGCGGCCGCAAGGAGGTACCGGGACGG
CCGATCCTGTGGGGGACGTCGGCCGACTTCCTGCGCCATTTCGGCCTGCGCGACCTGCGCGACCTGCCCCGGCGCGAGGA
ACTGCTGGTGGACGTGCCGGATAACCCGGTCCTCAACCCGGCTCCCAATCCGGCCCCCGGCCCGGCCCTTGACCCGGCGG
TGTCCCCGCCGGCCGCGACGACTCCCCAGGCGGTTTCCGATGCGCCGCCGACGTGA

Upstream 100 bases:

>100_bases
GCCAGGACGAACAGTTCGGCCGGATCATGCTGCGCCCCTGCACGGCCGACGATGCGGCCGAGGACGCGGGCGAGGATATG
GACAGGATGGACGCGGCGGA

Downstream 100 bases:

>100_bases
TACGTCTCCAGTCCCCATCAGCCGGTCCTGATTCATCCGCTCGCCGAGTTCGTCCATGTTCCAGCACACGCCCGTGATGC
GCCTGCCGCTGGCCGGTCCC

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTDTPLPETTVRADPASVRLVEALIFASPDPVSERAIAELLEAQGQVPADIDDLGAYVRSVIDAVVALYDGRGVAPVLIA
GGWQFRTAADLAPRLTRVLHRPRRLARATLETLAIIAYHQPCTRAEIEEIRGVSLSQQVLDTLLEASLIVPRGRKEVPGR
PILWGTSADFLRHFGLRDLRDLPRREELLVDVPDNPVLNPAPNPAPGPALDPAVSPPAATTPQAVSDAPPT

Sequences:

>Translated_231_residues
MTDTPLPETTVRADPASVRLVEALIFASPDPVSERAIAELLEAQGQVPADIDDLGAYVRSVIDAVVALYDGRGVAPVLIA
GGWQFRTAADLAPRLTRVLHRPRRLARATLETLAIIAYHQPCTRAEIEEIRGVSLSQQVLDTLLEASLIVPRGRKEVPGR
PILWGTSADFLRHFGLRDLRDLPRREELLVDVPDNPVLNPAPNPAPGPALDPAVSPPAATTPQAVSDAPPT
>Mature_230_residues
TDTPLPETTVRADPASVRLVEALIFASPDPVSERAIAELLEAQGQVPADIDDLGAYVRSVIDAVVALYDGRGVAPVLIAG
GWQFRTAADLAPRLTRVLHRPRRLARATLETLAIIAYHQPCTRAEIEEIRGVSLSQQVLDTLLEASLIVPRGRKEVPGRP
ILWGTSADFLRHFGLRDLRDLPRREELLVDVPDNPVLNPAPNPAPGPALDPAVSPPAATTPQAVSDAPPT

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 24845; Mature: 24713

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTPLPETTVRADPASVRLVEALIFASPDPVSERAIAELLEAQGQVPADIDDLGAYVRS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VIDAVVALYDGRGVAPVLIAGGWQFRTAADLAPRLTRVLHRPRRLARATLETLAIIAYHQ
HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PCTRAEIEEIRGVSLSQQVLDTLLEASLIVPRGRKEVPGRPILWGTSADFLRHFGLRDLR
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHCCHHHHH
DLPRREELLVDVPDNPVLNPAPNPAPGPALDPAVSPPAATTPQAVSDAPPT
HCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDTPLPETTVRADPASVRLVEALIFASPDPVSERAIAELLEAQGQVPADIDDLGAYVRS
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VIDAVVALYDGRGVAPVLIAGGWQFRTAADLAPRLTRVLHRPRRLARATLETLAIIAYHQ
HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PCTRAEIEEIRGVSLSQQVLDTLLEASLIVPRGRKEVPGRPILWGTSADFLRHFGLRDLR
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHCCHHHHH
DLPRREELLVDVPDNPVLNPAPNPAPGPALDPAVSPPAATTPQAVSDAPPT
HCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA