| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is gltX
Identifier: 162147995
GI number: 162147995
Start: 2264360
End: 2265691
Strand: Reverse
Name: gltX
Synonym: GDI_2211
Alternate gene names: 162147995
Gene position: 2265691-2264360 (Counterclockwise)
Preceding gene: 162147996
Following gene: 162147994
Centisome position: 57.44
GC content: 68.99
Gene sequence:
>1332_bases ATGAAACTCCGTTTTGCGCCCAGCCCGACGGGCCTGATCCATGTCGGCAACGCCCGCCAGGCGATTGCCAACGCCCTGTA CGCGCGCCGTCACGGCGGCACGTTCCAACTGCGCATCGACGATACCGACCGCGAGCGTTCGCGCGACGAGTATGTCGATG CCCTGCATACCGACCTGGCCTGGCTGGGGATCACGTGGGACGAAACGTTCCGCCAGTCCGACCGGCTGGACCGCTATGCG GCGGCGATCGAAACGCTGAAGGCGTCGGGCCGACTGTATCCGTGTTTCGAGAGCGAGCAGGAACTGGCGTCGAAGCGCGA GGCCCGGATTCGCATGCGCAAGCCGCCGATCTATGACCGCGCGATGCTGCGCATGACGGCGGAACAGCGCGCCCAGGCCG AGGCGAACGGCAAGGTGCCGTACTGGCGCTTCCGCCTGTCGGACCAGGACCGTGGCGTGGACGACATGGTCATGGGCCGC TCGCAGGTCAAATTGCAGTCGATTTCCGACCCGGTCCTGGTCCGGGCCGACGGCACGGTGCTGTACACGCTGGCCTCGGT CGTGGACGACATGGAAACCGGCGTGACCCACGTGCTGCGCGGCGAGGACCATCTGACCAACACCGGGGTGCAGATCGACA TCGCCGAGGCCCTGGGCGGAAAGGTCGGCCAGTTCGCCTTCGCCCACCTGCCGCTGCTGCTGGACGAAGCCGGGGGCAAG CTGTCCAAGCGGTTCGACGGGCTGTCGATCCGCGCGCTGCGGCAGGACGGGATCGATCCCGTCGCCATCGTGTCCTACCT GGCGCGGCTGGGCAGCGCGGACGACCCGGCGCCGCTGTCGTTCGACGACCTGGCCGCCAGCTATGACGTGCGGCGAGTGT CGCGCTCGGCGGCCCGTTTCGACATGCGGCAGCTTCTGGCCCTGAACCGGCGGGTCATGCACCAGATGCCCTTCGGCGCC ATTCGCGACCGCCTGCCCGAGGGTGCGACCGAGGCGTTCTGGATGGCCGTGCGCGGCAATGTCGACATGGTATCCGAACT GCGCCACTGGTGGGACGTCGTCGGCGGCGTGATCGTGCCGCCGGTCCAGGACGATGAAGGCGCCTACCTGCTGCAGGCGC TGGCCCTGCTGCCGCCCGAACCGTGGGACGCGCAGACCTGGAAGGACTGGACCACCGCCGTCCGCGACGCCACCGGCCGC AGCGGCAAATCGGTCTTCCACCCCCTGCGCGTCGCCCTGACCGGCGAGGAAGAGGGCCCCGAAATGCGCGACCTGCTGCC CCTGATGGGCCATGACCGGGTGGCGGAACGGCTACGCATCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases ATGGTCGAGGATGACGAGGACGAGACCCCGGAATAGACCGCATCCGGCGGCCTTTCGTCGCGGCTGGTCTTTCGGGCGCG TCCGACGCATATAGGGCGGC
Downstream 100 bases:
>100_bases ACAGGATGCCCGCGGCGTCCCGGGCCGCGTGAGGGGCCATGGCCATGCGTTCGAACGGACTGGAATTCTTCTGGGGAAAA GCGCGTGCTGTTCCAGCGGA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 2; GluRS 2
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKLRFAPSPTGLIHVGNARQAIANALYARRHGGTFQLRIDDTDRERSRDEYVDALHTDLAWLGITWDETFRQSDRLDRYA AAIETLKASGRLYPCFESEQELASKREARIRMRKPPIYDRAMLRMTAEQRAQAEANGKVPYWRFRLSDQDRGVDDMVMGR SQVKLQSISDPVLVRADGTVLYTLASVVDDMETGVTHVLRGEDHLTNTGVQIDIAEALGGKVGQFAFAHLPLLLDEAGGK LSKRFDGLSIRALRQDGIDPVAIVSYLARLGSADDPAPLSFDDLAASYDVRRVSRSAARFDMRQLLALNRRVMHQMPFGA IRDRLPEGATEAFWMAVRGNVDMVSELRHWWDVVGGVIVPPVQDDEGAYLLQALALLPPEPWDAQTWKDWTTAVRDATGR SGKSVFHPLRVALTGEEEGPEMRDLLPLMGHDRVAERLRIAAR
Sequences:
>Translated_443_residues MKLRFAPSPTGLIHVGNARQAIANALYARRHGGTFQLRIDDTDRERSRDEYVDALHTDLAWLGITWDETFRQSDRLDRYA AAIETLKASGRLYPCFESEQELASKREARIRMRKPPIYDRAMLRMTAEQRAQAEANGKVPYWRFRLSDQDRGVDDMVMGR SQVKLQSISDPVLVRADGTVLYTLASVVDDMETGVTHVLRGEDHLTNTGVQIDIAEALGGKVGQFAFAHLPLLLDEAGGK LSKRFDGLSIRALRQDGIDPVAIVSYLARLGSADDPAPLSFDDLAASYDVRRVSRSAARFDMRQLLALNRRVMHQMPFGA IRDRLPEGATEAFWMAVRGNVDMVSELRHWWDVVGGVIVPPVQDDEGAYLLQALALLPPEPWDAQTWKDWTTAVRDATGR SGKSVFHPLRVALTGEEEGPEMRDLLPLMGHDRVAERLRIAAR >Mature_443_residues MKLRFAPSPTGLIHVGNARQAIANALYARRHGGTFQLRIDDTDRERSRDEYVDALHTDLAWLGITWDETFRQSDRLDRYA AAIETLKASGRLYPCFESEQELASKREARIRMRKPPIYDRAMLRMTAEQRAQAEANGKVPYWRFRLSDQDRGVDDMVMGR SQVKLQSISDPVLVRADGTVLYTLASVVDDMETGVTHVLRGEDHLTNTGVQIDIAEALGGKVGQFAFAHLPLLLDEAGGK LSKRFDGLSIRALRQDGIDPVAIVSYLARLGSADDPAPLSFDDLAASYDVRRVSRSAARFDMRQLLALNRRVMHQMPFGA IRDRLPEGATEAFWMAVRGNVDMVSELRHWWDVVGGVIVPPVQDDEGAYLLQALALLPPEPWDAQTWKDWTTAVRDATGR SGKSVFHPLRVALTGEEEGPEMRDLLPLMGHDRVAERLRIAAR
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=486, Percent_Identity=30.0411522633745, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI4826960, Length=285, Percent_Identity=23.1578947368421, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1788743, Length=480, Percent_Identity=31.875, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI226510925, Length=249, Percent_Identity=32.1285140562249, Blast_Score=94, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71993394, Length=477, Percent_Identity=27.8825995807128, Blast_Score=162, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6324540, Length=497, Percent_Identity=26.9617706237425, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6324742, Length=107, Percent_Identity=33.6448598130841, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321192, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24665321, Length=489, Percent_Identity=31.0838445807771, Blast_Score=186, Evalue=3e-47,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE2_GLUDA (A9HLD9)
Other databases:
- EMBL: AM889285 - EMBL: CP001189 - RefSeq: YP_001602456.1 - RefSeq: YP_002274840.1 - ProteinModelPortal: A9HLD9 - SMR: A9HLD9 - GeneID: 5792212 - GeneID: 6973823 - GenomeReviews: AM889285_GR - GenomeReviews: CP001189_GR - KEGG: gdj:Gdia_0429 - HOGENOM: HBG628189 - OMA: PHWRFKL - ProtClustDB: PRK12558 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 49681; Mature: 49681
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 243-243
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRFAPSPTGLIHVGNARQAIANALYARRHGGTFQLRIDDTDRERSRDEYVDALHTDLA CCEECCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCHH WLGITWDETFRQSDRLDRYAAAIETLKASGRLYPCFESEQELASKREARIRMRKPPIYDR EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHEEECCCCCHHH AMLRMTAEQRAQAEANGKVPYWRFRLSDQDRGVDDMVMGRSQVKLQSISDPVLVRADGTV HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCHHHHHHHCCCCCEEEEECCHH LYTLASVVDDMETGVTHVLRGEDHLTNTGVQIDIAEALGGKVGQFAFAHLPLLLDEAGGK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCH LSKRFDGLSIRALRQDGIDPVAIVSYLARLGSADDPAPLSFDDLAASYDVRRVSRSAARF HHHHCCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DMRQLLALNRRVMHQMPFGAIRDRLPEGATEAFWMAVRGNVDMVSELRHWWDVVGGVIVP HHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHEEEEECCCHHHHHHHHHHHHHHCCEEEC PVQDDEGAYLLQALALLPPEPWDAQTWKDWTTAVRDATGRSGKSVFHPLRVALTGEEEGP CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCEEEEEEECCCCCC EMRDLLPLMGHDRVAERLRIAAR HHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MKLRFAPSPTGLIHVGNARQAIANALYARRHGGTFQLRIDDTDRERSRDEYVDALHTDLA CCEECCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCHH WLGITWDETFRQSDRLDRYAAAIETLKASGRLYPCFESEQELASKREARIRMRKPPIYDR EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHEEECCCCCHHH AMLRMTAEQRAQAEANGKVPYWRFRLSDQDRGVDDMVMGRSQVKLQSISDPVLVRADGTV HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCHHHHHHHCCCCCEEEEECCHH LYTLASVVDDMETGVTHVLRGEDHLTNTGVQIDIAEALGGKVGQFAFAHLPLLLDEAGGK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCH LSKRFDGLSIRALRQDGIDPVAIVSYLARLGSADDPAPLSFDDLAASYDVRRVSRSAARF HHHHCCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DMRQLLALNRRVMHQMPFGAIRDRLPEGATEAFWMAVRGNVDMVSELRHWWDVVGGVIVP HHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHEEEEECCCHHHHHHHHHHHHHHCCEEEC PVQDDEGAYLLQALALLPPEPWDAQTWKDWTTAVRDATGRSGKSVFHPLRVALTGEEEGP CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCEEEEEEECCCCCC EMRDLLPLMGHDRVAERLRIAAR HHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA