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The map label for this gene is yagI [H]

Identifier: 162147958

GI number: 162147958

Start: 2224995

End: 2225828

Strand: Reverse

Name: yagI [H]

Synonym: GDI_2174

Alternate gene names: 162147958

Gene position: 2225828-2224995 (Counterclockwise)

Preceding gene: 162147959

Following gene: 162147957

Centisome position: 56.43

GC content: 69.9

Gene sequence:

>834_bases
TTGAGTTTCTTCCTCGTCTGGCCTAGCGATTTGGGACGGGAGGGCACGATGATGGGCCATAATGACGGCAAGGGGACGGC
GGCCAGCGGAACGCAGGCCCTGGAACGCGGGATCGCGATCGTCGATGCCGTGGATTCGGGACACCGGACCTTGCCTGCCA
TCGCGACCGCGACCGGCTGCACCCGCAGCACCACGCAACGAATCGTGCAGTCGCTGGTCCGGCTGAACTGGCTGCTTCAG
CAGTCCGACGGAACCTACGACCTGGGTCCGCGCCTGGCGGCGCTGTCCCAGCGCGCGCGGGCCGAGACCTCGCTGGCCAC
GCTGGCACGGCCCGTGGCCGAGCGGCTGGGGGCGGAAACGCGCGACACAGTGCATGTGGGTGTGCGCTCCGGCGCCGACA
TTCTCTATCTGGACAAGATCCCCGGACAGCGGGGCCTGGAAATGCGCTCGCGCGTCAGGCAGCGCATGAGGCTGGCCCTG
ACCGGGATCGGGCGTGCCCTGATGCTGGACCTGGACGAGGACGAGTGGGGCCTGCTGTTCGATGCCGCCCGGCCCGATGC
CACGCCGGATGAGCGCACGGCGTGGGTGGAGCGGATGCGCGCCTATCGGGCCGAGGGCTGCGTGTTCGACCTGGAGGATA
ACGAGATCGGGATTCGCTGTGTCGCGGCCCCGGTGCGCGATCGTGACGGACGGATCGTCGTGGCGCTGAGCGTTGCCAGC
GCCACGCCCTATCTGTCGCCCGTGCGCATGCAGGCCCTGGCGCCGGTCGTGCGCCGCGCGGCGGCCGACCTGTCGGCCCG
GCTGGGATGGAGGTCCGATGTCCGTGCCGCATGA

Upstream 100 bases:

>100_bases
CCGTCCAGTACGGACAGCGACCGGGCGTTTCGCGTTTCCGGATGGCGGAAAGTCGCCATTTTTCTTCAAAAACCCACAAT
GTGGGTCAATAGTTCATATA

Downstream 100 bases:

>100_bases
ACAACCCGGGGACGGAGCCCTGATCGCGATCGACTGGGGAACCTCCGCGCTGCGGGCCTGGCGCATGGCGGCGGATGGCA
CGGTGCTGGACGCGGCCAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSFFLVWPSDLGREGTMMGHNDGKGTAASGTQALERGIAIVDAVDSGHRTLPAIATATGCTRSTTQRIVQSLVRLNWLLQ
QSDGTYDLGPRLAALSQRARAETSLATLARPVAERLGAETRDTVHVGVRSGADILYLDKIPGQRGLEMRSRVRQRMRLAL
TGIGRALMLDLDEDEWGLLFDAARPDATPDERTAWVERMRAYRAEGCVFDLEDNEIGIRCVAAPVRDRDGRIVVALSVAS
ATPYLSPVRMQALAPVVRRAAADLSARLGWRSDVRAA

Sequences:

>Translated_277_residues
MSFFLVWPSDLGREGTMMGHNDGKGTAASGTQALERGIAIVDAVDSGHRTLPAIATATGCTRSTTQRIVQSLVRLNWLLQ
QSDGTYDLGPRLAALSQRARAETSLATLARPVAERLGAETRDTVHVGVRSGADILYLDKIPGQRGLEMRSRVRQRMRLAL
TGIGRALMLDLDEDEWGLLFDAARPDATPDERTAWVERMRAYRAEGCVFDLEDNEIGIRCVAAPVRDRDGRIVVALSVAS
ATPYLSPVRMQALAPVVRRAAADLSARLGWRSDVRAA
>Mature_276_residues
SFFLVWPSDLGREGTMMGHNDGKGTAASGTQALERGIAIVDAVDSGHRTLPAIATATGCTRSTTQRIVQSLVRLNWLLQQ
SDGTYDLGPRLAALSQRARAETSLATLARPVAERLGAETRDTVHVGVRSGADILYLDKIPGQRGLEMRSRVRQRMRLALT
GIGRALMLDLDEDEWGLLFDAARPDATPDERTAWVERMRAYRAEGCVFDLEDNEIGIRCVAAPVRDRDGRIVVALSVASA
TPYLSPVRMQALAPVVRRAAADLSARLGWRSDVRAA

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=217, Percent_Identity=29.9539170506912, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786468, Length=246, Percent_Identity=26.8292682926829, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789999, Length=252, Percent_Identity=25, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786715, Length=254, Percent_Identity=25.1968503937008, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788581, Length=257, Percent_Identity=26.0700389105058, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790752, Length=219, Percent_Identity=21.4611872146119, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082359, Length=252, Percent_Identity=21.8253968253968, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 30178; Mature: 30047

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFLVWPSDLGREGTMMGHNDGKGTAASGTQALERGIAIVDAVDSGHRTLPAIATATGC
CEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHCCC
TRSTTQRIVQSLVRLNWLLQQSDGTYDLGPRLAALSQRARAETSLATLARPVAERLGAET
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDTVHVGVRSGADILYLDKIPGQRGLEMRSRVRQRMRLALTGIGRALMLDLDEDEWGLLF
CCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEE
DAARPDATPDERTAWVERMRAYRAEGCVFDLEDNEIGIRCVAAPVRDRDGRIVVALSVAS
ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCEEEEEEEECC
ATPYLSPVRMQALAPVVRRAAADLSARLGWRSDVRAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SFFLVWPSDLGREGTMMGHNDGKGTAASGTQALERGIAIVDAVDSGHRTLPAIATATGC
EEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHCCC
TRSTTQRIVQSLVRLNWLLQQSDGTYDLGPRLAALSQRARAETSLATLARPVAERLGAET
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDTVHVGVRSGADILYLDKIPGQRGLEMRSRVRQRMRLALTGIGRALMLDLDEDEWGLLF
CCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEE
DAARPDATPDERTAWVERMRAYRAEGCVFDLEDNEIGIRCVAAPVRDRDGRIVVALSVAS
ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCEEEEEEEECC
ATPYLSPVRMQALAPVVRRAAADLSARLGWRSDVRAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]