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The map label for this gene is dgoK [H]

Identifier: 162147957

GI number: 162147957

Start: 2224025

End: 2224975

Strand: Reverse

Name: dgoK [H]

Synonym: GDI_2173

Alternate gene names: 162147957

Gene position: 2224975-2224025 (Counterclockwise)

Preceding gene: 162147958

Following gene: 162147956

Centisome position: 56.41

GC content: 72.87

Gene sequence:

>951_bases
CTGATCGCGATCGACTGGGGAACCTCCGCGCTGCGGGCCTGGCGCATGGCGGCGGATGGCACGGTGCTGGACGCGGCCAG
CGGGCCGTGGGGCATCCTGAACCTGCCGGAGGGCGGGTTTCCGGCGGCGCTGGTGGCGCTGCTGGCCGACTGGCCGGATG
CGGCGGGCCTGAAGCTGATCGCGTGCGGGATGATCGGCAGCGTGAACGGCTGGCACGAGGTCCCCTATGTCGACTGCCCG
GCCGATGCCGCCGCCCTGGCCCGGGCGCTGGGGCGGCCGCACATGGGCGGCGCGGTGCCGGGAATCGTGCCCGGCCTGCG
GCAGTTCCAGCCCCTGCCGGACGTGATGCGGGGCGAGGAGACCCAGATCGTCGGCGCGCTGGCGCTGCACCCGGACCTGT
CCCACGCCGCGACGCTGATCCTGCCCGGAACCCATTCCAAGTGGGTGACGGTGCGTCATGGACGGATCACGGGCTTCCAC
ACCGCCATGACGGGCGAACTGTTCGCCGTGCTGTCCCAGCACAGCATCCTGGGTCGCCCGGCGGAAGGCGCCGAACCGGT
GGCCGAGGACGAGGCCCGCGCGGCCTTCCGTCGTGGCGTCCAGGCGGCTTCGTCGTCCCGCCAGGGGGTGGCCCCGCTGC
TGTTCTCGGCCCGCAGCCTGTTCCTGACCGGCGGCCTGGGCGCGGCCGCCACGCGGGATTACCTGTCCGGCCTGCTGGTC
GGGGACGAGATCCGCGCCTTCCTGGCCGACAGGACGGAGATGTTGCCGACCGTCCTGGTGGGCGAGGACCGGCTGTGCGG
CCTGTACGCCCAGGCGTTCGAAATGCTGGGCGCCCCGGTGCCGCGCCTGGTCGGCAACACCGCGCCGGCCGGGCTGTACC
GCATCGCGGTGGAAGCCGGATACCTGCGGCCGACCCCCGAGGAAGATACGACACACGGAGATACGACATGA

Upstream 100 bases:

>100_bases
GCCCTGGCGCCGGTCGTGCGCCGCGCGGCGGCCGACCTGTCGGCCCGGCTGGGATGGAGGTCCGATGTCCGTGCCGCATG
AACAACCCGGGGACGGAGCC

Downstream 100 bases:

>100_bases
TGACGTTCGACCGCGCCCTGGACGTCTGCCCCCTGGTCGCCATCCTACGCGGCATCCGCCCGGACGAGGTGCTGGACATC
GGTCAGGCGCTGGTCGAAGC

Product: 2-dehydro-3-deoxygalactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIAIDWGTSALRAWRMAADGTVLDAASGPWGILNLPEGGFPAALVALLADWPDAAGLKLIACGMIGSVNGWHEVPYVDCP
ADAAALARALGRPHMGGAVPGIVPGLRQFQPLPDVMRGEETQIVGALALHPDLSHAATLILPGTHSKWVTVRHGRITGFH
TAMTGELFAVLSQHSILGRPAEGAEPVAEDEARAAFRRGVQAASSSRQGVAPLLFSARSLFLTGGLGAAATRDYLSGLLV
GDEIRAFLADRTEMLPTVLVGEDRLCGLYAQAFEMLGAPVPRLVGNTAPAGLYRIAVEAGYLRPTPEEDTTHGDTT

Sequences:

>Translated_316_residues
MIAIDWGTSALRAWRMAADGTVLDAASGPWGILNLPEGGFPAALVALLADWPDAAGLKLIACGMIGSVNGWHEVPYVDCP
ADAAALARALGRPHMGGAVPGIVPGLRQFQPLPDVMRGEETQIVGALALHPDLSHAATLILPGTHSKWVTVRHGRITGFH
TAMTGELFAVLSQHSILGRPAEGAEPVAEDEARAAFRRGVQAASSSRQGVAPLLFSARSLFLTGGLGAAATRDYLSGLLV
GDEIRAFLADRTEMLPTVLVGEDRLCGLYAQAFEMLGAPVPRLVGNTAPAGLYRIAVEAGYLRPTPEEDTTHGDTT
>Mature_316_residues
MIAIDWGTSALRAWRMAADGTVLDAASGPWGILNLPEGGFPAALVALLADWPDAAGLKLIACGMIGSVNGWHEVPYVDCP
ADAAALARALGRPHMGGAVPGIVPGLRQFQPLPDVMRGEETQIVGALALHPDLSHAATLILPGTHSKWVTVRHGRITGFH
TAMTGELFAVLSQHSILGRPAEGAEPVAEDEARAAFRRGVQAASSSRQGVAPLLFSARSLFLTGGLGAAATRDYLSGLLV
GDEIRAFLADRTEMLPTVLVGEDRLCGLYAQAFEMLGAPVPRLVGNTAPAGLYRIAVEAGYLRPTPEEDTTHGDTT

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=298, Percent_Identity=34.8993288590604, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 33075; Mature: 33075

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIDWGTSALRAWRMAADGTVLDAASGPWGILNLPEGGFPAALVALLADWPDAAGLKLI
CEEEECCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
ACGMIGSVNGWHEVPYVDCPADAAALARALGRPHMGGAVPGIVPGLRQFQPLPDVMRGEE
EECHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHCCCC
TQIVGALALHPDLSHAATLILPGTHSKWVTVRHGRITGFHTAMTGELFAVLSQHSILGRP
CEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCC
AEGAEPVAEDEARAAFRRGVQAASSSRQGVAPLLFSARSLFLTGGLGAAATRDYLSGLLV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
GDEIRAFLADRTEMLPTVLVGEDRLCGLYAQAFEMLGAPVPRLVGNTAPAGLYRIAVEAG
HHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECC
YLRPTPEEDTTHGDTT
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIAIDWGTSALRAWRMAADGTVLDAASGPWGILNLPEGGFPAALVALLADWPDAAGLKLI
CEEEECCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
ACGMIGSVNGWHEVPYVDCPADAAALARALGRPHMGGAVPGIVPGLRQFQPLPDVMRGEE
EECHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHCCCC
TQIVGALALHPDLSHAATLILPGTHSKWVTVRHGRITGFHTAMTGELFAVLSQHSILGRP
CEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCC
AEGAEPVAEDEARAAFRRGVQAASSSRQGVAPLLFSARSLFLTGGLGAAATRDYLSGLLV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
GDEIRAFLADRTEMLPTVLVGEDRLCGLYAQAFEMLGAPVPRLVGNTAPAGLYRIAVEAG
HHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECC
YLRPTPEEDTTHGDTT
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]