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The map label for this gene is 162147951

Identifier: 162147951

GI number: 162147951

Start: 2218207

End: 2219085

Strand: Reverse

Name: 162147951

Synonym: GDI_2167

Alternate gene names: NA

Gene position: 2219085-2218207 (Counterclockwise)

Preceding gene: 162147953

Following gene: 162147949

Centisome position: 56.26

GC content: 72.58

Gene sequence:

>879_bases
ATGACGAATACTACGGAAAAGCGCGCGGCCGAAACGGGCCTCTCCGCCATGGGCGAAATCGCCCGGCGGTCCGATCCGGA
CCGGTTTTTCTGCACGCTGTTCCTGCCGGCCTCCGTCAGGGAAGACGCCTTCACGCTGATCGCGTTCAATCACGAATCCG
TCCGCGCCCTGTCCGGTATGCACTCCCGGTCCGTTGCCGGCCCCATGGCCGGGCTGATTCGCCTGCAATGGTGGCGGGAA
ATCGTCGAGGGCGCCTCCCACCCGCACGAAGTCGCGGATCCCCTGCGCGCCCTGATCCGCGCCGGCCGGGTCCGACGGGA
CACCCTGCTGGGAATCCTGGACGCGCGTGAGGCCGAACTGGAGGGCCTGCCGGACTGGGCAGCGTGGCGGGCCGCGATGC
GCGCCGGTGCCGGCGGCGTCCAGGCCGCCATCGCCCAGGTTGCCGGGACCGGGACGACCGATCCCGACCTGTTGCGGGCG
GTCGAATTCCTGGGTGCCGCCTATGGCGTGGGCGGGCTGCTGCGTCACATGGGCGCGGTACTGGCTGGTGGCCGCTGTCC
GCTGCCGGAGCCGGCATTGCAGGAATTCGGCCTGTCGGGAGAATCGATCCGGGACGGCGCCGGTATCCAGGGGTCCGACC
TGACGCCCCTTCGGGCCCGCCTGCGCGACGAGGGACGGGAATTTCTGGCCCAGGCGGGGATGCAGGTGGCGGCCGGGGCC
GTCCGGGTGCGGCTGCCCCGTGCGGTGCGCGCGGCGGGCCTGCCGGGTGCCCTGGCCCGGCGCGACCTGGGCCGTGGCCA
TGATCGCGAAGTCGGAGCGGCGCGCGGACTGGGCGACCGGCTGGCGGTCATGGCCGCGATGGCGCGGGGGCGGATCTGA

Upstream 100 bases:

>100_bases
CTATGAGCGCCGGCCGGGTGCGTCAAGTGACGGAGAGATGACCACATCCCCCGTCGCCGCCGGGCTTGTGCCCGCGGCCG
GCGCGCGGCATGTCCGTGAC

Downstream 100 bases:

>100_bases
CCCGCCCAGCCGCGGTGTCGGTCAAGGGCTGTTGGCCACCGTGCGTTCCAGCACGGCGAACAGGGCGGAATAATCGTCGT
CGGGATGGGTGCGCCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene/Squalene Synthetase-Like Protein; Phytoene/Squalene Synthase; Phytoene Synthase Family Protein

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTNTTEKRAAETGLSAMGEIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGMHSRSVAGPMAGLIRLQWWRE
IVEGASHPHEVADPLRALIRAGRVRRDTLLGILDAREAELEGLPDWAAWRAAMRAGAGGVQAAIAQVAGTGTTDPDLLRA
VEFLGAAYGVGGLLRHMGAVLAGGRCPLPEPALQEFGLSGESIRDGAGIQGSDLTPLRARLRDEGREFLAQAGMQVAAGA
VRVRLPRAVRAAGLPGALARRDLGRGHDREVGAARGLGDRLAVMAAMARGRI

Sequences:

>Translated_292_residues
MTNTTEKRAAETGLSAMGEIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGMHSRSVAGPMAGLIRLQWWRE
IVEGASHPHEVADPLRALIRAGRVRRDTLLGILDAREAELEGLPDWAAWRAAMRAGAGGVQAAIAQVAGTGTTDPDLLRA
VEFLGAAYGVGGLLRHMGAVLAGGRCPLPEPALQEFGLSGESIRDGAGIQGSDLTPLRARLRDEGREFLAQAGMQVAAGA
VRVRLPRAVRAAGLPGALARRDLGRGHDREVGAARGLGDRLAVMAAMARGRI
>Mature_291_residues
TNTTEKRAAETGLSAMGEIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGMHSRSVAGPMAGLIRLQWWREI
VEGASHPHEVADPLRALIRAGRVRRDTLLGILDAREAELEGLPDWAAWRAAMRAGAGGVQAAIAQVAGTGTTDPDLLRAV
EFLGAAYGVGGLLRHMGAVLAGGRCPLPEPALQEFGLSGESIRDGAGIQGSDLTPLRARLRDEGREFLAQAGMQVAAGAV
RVRLPRAVRAAGLPGALARRDLGRGHDREVGAARGLGDRLAVMAAMARGRI

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30945; Mature: 30814

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTTEKRAAETGLSAMGEIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGM
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
HSRSVAGPMAGLIRLQWWREIVEGASHPHEVADPLRALIRAGRVRRDTLLGILDAREAEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EGLPDWAAWRAAMRAGAGGVQAAIAQVAGTGTTDPDLLRAVEFLGAAYGVGGLLRHMGAV
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGGRCPLPEPALQEFGLSGESIRDGAGIQGSDLTPLRARLRDEGREFLAQAGMQVAAGA
HCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VRVRLPRAVRAAGLPGALARRDLGRGHDREVGAARGLGDRLAVMAAMARGRI
HHHHCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNTTEKRAAETGLSAMGEIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGM
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
HSRSVAGPMAGLIRLQWWREIVEGASHPHEVADPLRALIRAGRVRRDTLLGILDAREAEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EGLPDWAAWRAAMRAGAGGVQAAIAQVAGTGTTDPDLLRAVEFLGAAYGVGGLLRHMGAV
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGGRCPLPEPALQEFGLSGESIRDGAGIQGSDLTPLRARLRDEGREFLAQAGMQVAAGA
HCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VRVRLPRAVRAAGLPGALARRDLGRGHDREVGAARGLGDRLAVMAAMARGRI
HHHHCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA