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The map label for this gene is yedY [H]

Identifier: 162147949

GI number: 162147949

Start: 2216233

End: 2217186

Strand: Reverse

Name: yedY [H]

Synonym: GDI_2165

Alternate gene names: 162147949

Gene position: 2217186-2216233 (Counterclockwise)

Preceding gene: 162147951

Following gene: 162147948

Centisome position: 56.21

GC content: 68.03

Gene sequence:

>954_bases
ATGAGTGTCTTTCGCTACCCGCGCCCCCCGTCATCGGACATCACGCCTCATGCGGCGTGGCTGTCGCGGCGCGATATCCT
GGCGACCGGGCTGGCGGGTGCTGCCGGCGCGATCCTGCCGCCCCGGATTGCCCAGGCGGACACGCTGGCCGCGCGCCCCG
GCCCCCTGTCCGATGGCGGGCTGACGCCCACTCCACTGCAGGACGTCACGCATTACAATAATTTCTATGAATTCGGGCTG
GAGAAAACCGACCCCGCCGAACGATCCGGCGATTTCCATCCGCGTCCCTGGACGCTGCGGGTCGAGGGCATGGTGGCAAA
GCCCCGGACCTATGACATCGACACGCTGCTGGCCCGCCCGCTGGAGGAACGGATCTACCGGATGCGCTGCGTCGAGGCCT
GGTCGATGGTCATTCCGTGGATCGGCTTTTCGCTGGGCGACCTGCTGCGCGAGGTCGAACCGCTGGGCAGCGCCCGATAT
GTCGCGTTCGAATCCGTGTTGCGGCCGTCGGAAATGCCGGGGCAGAGTGGCCTGCTGCCGGTCCTGGACTGGCCGTATGT
CGAGGCCCTGCGCCTGGACGAGGCCCTGCACCCGCTGACGATCCTGGCGGTCGGGCTGTATGGCCAGACGCTGCCCAACC
AGAACGGCGCGCCGGTCCGACTGGTGGTGCCATGGAAATACGGCTTCAAGGGAATCAAGTCGGTCGTGCGGATCCGCCTG
ACCGACAGCCGCCCCCGGACGGCCTGGAACGTCCGCGCGCCGGACGAATACGGGTTCTATGCCAACGTCAATCCAGCGGT
CGATCATCCCCGCTGGAGCCAGGCGACGGAACGGCCGATCGGCGTGCGCGGCGGCTTCTTCGGCGCGGCCCGGCAGCCGA
CGCTGCCGTTCAACGGCTATGGCGCGCAGGTCGCCGGCCTGTATGCCGGCATGGACCTGCGGCGAGACTTCTGA

Upstream 100 bases:

>100_bases
AATTGGACATGATCCTGACCCTTTCCTTTTCTGCCCTGGCGCGGGCACAGTGCGGGACCGTCCCGGCGACGTCACGTCCG
GGCCCCTGCAAGGCCGCCAC

Downstream 100 bases:

>100_bases
CGTGGCGGTGTCCCGGCGCGGGCCGTCCGCCCTTCTGACCCGTCAGGGCCTGATCCGGTTCGGCCTGTACGCCGTGGGGC
TGGTCCCGGCGGTGGCGACC

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSVFRYPRPPSSDITPHAAWLSRRDILATGLAGAAGAILPPRIAQADTLAARPGPLSDGGLTPTPLQDVTHYNNFYEFGL
EKTDPAERSGDFHPRPWTLRVEGMVAKPRTYDIDTLLARPLEERIYRMRCVEAWSMVIPWIGFSLGDLLREVEPLGSARY
VAFESVLRPSEMPGQSGLLPVLDWPYVEALRLDEALHPLTILAVGLYGQTLPNQNGAPVRLVVPWKYGFKGIKSVVRIRL
TDSRPRTAWNVRAPDEYGFYANVNPAVDHPRWSQATERPIGVRGGFFGAARQPTLPFNGYGAQVAGLYAGMDLRRDF

Sequences:

>Translated_317_residues
MSVFRYPRPPSSDITPHAAWLSRRDILATGLAGAAGAILPPRIAQADTLAARPGPLSDGGLTPTPLQDVTHYNNFYEFGL
EKTDPAERSGDFHPRPWTLRVEGMVAKPRTYDIDTLLARPLEERIYRMRCVEAWSMVIPWIGFSLGDLLREVEPLGSARY
VAFESVLRPSEMPGQSGLLPVLDWPYVEALRLDEALHPLTILAVGLYGQTLPNQNGAPVRLVVPWKYGFKGIKSVVRIRL
TDSRPRTAWNVRAPDEYGFYANVNPAVDHPRWSQATERPIGVRGGFFGAARQPTLPFNGYGAQVAGLYAGMDLRRDF
>Mature_316_residues
SVFRYPRPPSSDITPHAAWLSRRDILATGLAGAAGAILPPRIAQADTLAARPGPLSDGGLTPTPLQDVTHYNNFYEFGLE
KTDPAERSGDFHPRPWTLRVEGMVAKPRTYDIDTLLARPLEERIYRMRCVEAWSMVIPWIGFSLGDLLREVEPLGSARYV
AFESVLRPSEMPGQSGLLPVLDWPYVEALRLDEALHPLTILAVGLYGQTLPNQNGAPVRLVVPWKYGFKGIKSVVRIRLT
DSRPRTAWNVRAPDEYGFYANVNPAVDHPRWSQATERPIGVRGGFFGAARQPTLPFNGYGAQVAGLYAGMDLRRDF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=328, Percent_Identity=55.7926829268293, Blast_Score=348, Evalue=3e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 35235; Mature: 35103

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFRYPRPPSSDITPHAAWLSRRDILATGLAGAAGAILPPRIAQADTLAARPGPLSDGG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
LTPTPLQDVTHYNNFYEFGLEKTDPAERSGDFHPRPWTLRVEGMVAKPRTYDIDTLLARP
CCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHH
LEERIYRMRCVEAWSMVIPWIGFSLGDLLREVEPLGSARYVAFESVLRPSEMPGQSGLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
VLDWPYVEALRLDEALHPLTILAVGLYGQTLPNQNGAPVRLVVPWKYGFKGIKSVVRIRL
CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHCHHHHHHHEEEEE
TDSRPRTAWNVRAPDEYGFYANVNPAVDHPRWSQATERPIGVRGGFFGAARQPTLPFNGY
ECCCCCCEEECCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
GAQVAGLYAGMDLRRDF
CCHHHHHHHCCHHHCCC
>Mature Secondary Structure 
SVFRYPRPPSSDITPHAAWLSRRDILATGLAGAAGAILPPRIAQADTLAARPGPLSDGG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
LTPTPLQDVTHYNNFYEFGLEKTDPAERSGDFHPRPWTLRVEGMVAKPRTYDIDTLLARP
CCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHH
LEERIYRMRCVEAWSMVIPWIGFSLGDLLREVEPLGSARYVAFESVLRPSEMPGQSGLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
VLDWPYVEALRLDEALHPLTILAVGLYGQTLPNQNGAPVRLVVPWKYGFKGIKSVVRIRL
CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHCHHHHHHHEEEEE
TDSRPRTAWNVRAPDEYGFYANVNPAVDHPRWSQATERPIGVRGGFFGAARQPTLPFNGY
ECCCCCCEEECCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
GAQVAGLYAGMDLRRDF
CCHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA