Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yedZ [H]

Identifier: 162147948

GI number: 162147948

Start: 2215608

End: 2216231

Strand: Reverse

Name: yedZ [H]

Synonym: GDI_2164

Alternate gene names: 162147948

Gene position: 2216231-2215608 (Counterclockwise)

Preceding gene: 162147949

Following gene: 162147947

Centisome position: 56.19

GC content: 68.75

Gene sequence:

>624_bases
GTGGCGGTGTCCCGGCGCGGGCCGTCCGCCCTTCTGACCCGTCAGGGCCTGATCCGGTTCGGCCTGTACGCCGTGGGGCT
GGTCCCGGCGGTGGCGACCTTCGTCATGGGGGCGACCAATCGCCTGGGTGCCGATCCGGTCAACAGCTTCGAACGCACGC
TGGGCCTGTGGGCGCTGCGGTTCCTGATCCTGTCGCTGTGCGTGACCCCGCTGCGCGAACGCACCGGGGTCAACCTGCTG
CGCTACCGGCGGGCACTGGGGCTGCTGGCCTTCTGGTATGCGCTGTTCCACCTGTCGGCCTATGTGGGGCTGGACCAGGG
GTTCGACCTGCCCGTGCTGCTGGCCGACGTGACGCGGCGGCCCTTCATCATCCTGGGCATGGTGGCCTTCACCATCCTGG
TCGTCCTGGCCGCGACCTCCAACGCCTGGTCGATCCGCCGGCTGGGACGGCGATGGCGGTCCGTGCATCGCTGGGTCTAT
CTGGCCGCATTGTGCGCCGCGATCCATTTCATCCTGTCGTTCAAGGTGATTCGGGCCGAAACGCTGGTCTATGCCCTGAT
CGTCGTCGGCCTGCTGGCCTATCGGCTGCTGCCGGCGGCGCTGCGTCGCCCCAGGGTTGCATGA

Upstream 100 bases:

>100_bases
TTCTTCGGCGCGGCCCGGCAGCCGACGCTGCCGTTCAACGGCTATGGCGCGCAGGTCGCCGGCCTGTATGCCGGCATGGA
CCTGCGGCGAGACTTCTGAC

Downstream 100 bases:

>100_bases
ACCTGTCGCATAAAGATGATGGCGCCCCCGACCCCGGGGCATGGCATGACGGACGAAGTGACGGATGCCAAGATGGACGC
CATGATCGCCGGACCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALRFLILSLCVTPLRERTGVNLL
RYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRRPFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVY
LAALCAAIHFILSFKVIRAETLVYALIVVGLLAYRLLPAALRRPRVA

Sequences:

>Translated_207_residues
MAVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALRFLILSLCVTPLRERTGVNLL
RYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRRPFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVY
LAALCAAIHFILSFKVIRAETLVYALIVVGLLAYRLLPAALRRPRVA
>Mature_206_residues
AVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALRFLILSLCVTPLRERTGVNLLR
YRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRRPFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVYL
AALCAAIHFILSFKVIRAETLVYALIVVGLLAYRLLPAALRRPRVA

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=171, Percent_Identity=38.0116959064327, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 23118; Mature: 22987

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FLILSLCVTPLRERTGVNLLRYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVYLAALCAAIHFILSFKVIRAE
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVYALIVVGLLAYRLLPAALRRPRVA
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FLILSLCVTPLRERTGVNLLRYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVYLAALCAAIHFILSFKVIRAE
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVYALIVVGLLAYRLLPAALRRPRVA
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA