| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yedZ [H]
Identifier: 162147948
GI number: 162147948
Start: 2215608
End: 2216231
Strand: Reverse
Name: yedZ [H]
Synonym: GDI_2164
Alternate gene names: 162147948
Gene position: 2216231-2215608 (Counterclockwise)
Preceding gene: 162147949
Following gene: 162147947
Centisome position: 56.19
GC content: 68.75
Gene sequence:
>624_bases GTGGCGGTGTCCCGGCGCGGGCCGTCCGCCCTTCTGACCCGTCAGGGCCTGATCCGGTTCGGCCTGTACGCCGTGGGGCT GGTCCCGGCGGTGGCGACCTTCGTCATGGGGGCGACCAATCGCCTGGGTGCCGATCCGGTCAACAGCTTCGAACGCACGC TGGGCCTGTGGGCGCTGCGGTTCCTGATCCTGTCGCTGTGCGTGACCCCGCTGCGCGAACGCACCGGGGTCAACCTGCTG CGCTACCGGCGGGCACTGGGGCTGCTGGCCTTCTGGTATGCGCTGTTCCACCTGTCGGCCTATGTGGGGCTGGACCAGGG GTTCGACCTGCCCGTGCTGCTGGCCGACGTGACGCGGCGGCCCTTCATCATCCTGGGCATGGTGGCCTTCACCATCCTGG TCGTCCTGGCCGCGACCTCCAACGCCTGGTCGATCCGCCGGCTGGGACGGCGATGGCGGTCCGTGCATCGCTGGGTCTAT CTGGCCGCATTGTGCGCCGCGATCCATTTCATCCTGTCGTTCAAGGTGATTCGGGCCGAAACGCTGGTCTATGCCCTGAT CGTCGTCGGCCTGCTGGCCTATCGGCTGCTGCCGGCGGCGCTGCGTCGCCCCAGGGTTGCATGA
Upstream 100 bases:
>100_bases TTCTTCGGCGCGGCCCGGCAGCCGACGCTGCCGTTCAACGGCTATGGCGCGCAGGTCGCCGGCCTGTATGCCGGCATGGA CCTGCGGCGAGACTTCTGAC
Downstream 100 bases:
>100_bases ACCTGTCGCATAAAGATGATGGCGCCCCCGACCCCGGGGCATGGCATGACGGACGAAGTGACGGATGCCAAGATGGACGC CATGATCGCCGGACCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALRFLILSLCVTPLRERTGVNLL RYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRRPFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVY LAALCAAIHFILSFKVIRAETLVYALIVVGLLAYRLLPAALRRPRVA
Sequences:
>Translated_207_residues MAVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALRFLILSLCVTPLRERTGVNLL RYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRRPFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVY LAALCAAIHFILSFKVIRAETLVYALIVVGLLAYRLLPAALRRPRVA >Mature_206_residues AVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALRFLILSLCVTPLRERTGVNLLR YRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRRPFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVYL AALCAAIHFILSFKVIRAETLVYALIVVGLLAYRLLPAALRRPRVA
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=171, Percent_Identity=38.0116959064327, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 23118; Mature: 22987
Theoretical pI: Translated: 12.18; Mature: 12.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FLILSLCVTPLRERTGVNLLRYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC PFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVYLAALCAAIHFILSFKVIRAE CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVYALIVVGLLAYRLLPAALRRPRVA HHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVSRRGPSALLTRQGLIRFGLYAVGLVPAVATFVMGATNRLGADPVNSFERTLGLWALR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FLILSLCVTPLRERTGVNLLRYRRALGLLAFWYALFHLSAYVGLDQGFDLPVLLADVTRR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC PFIILGMVAFTILVVLAATSNAWSIRRLGRRWRSVHRWVYLAALCAAIHFILSFKVIRAE CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVYALIVVGLLAYRLLPAALRRPRVA HHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA