Click here to switch to the map view.

The map label for this gene is mmpA [C]

Identifier: 162147930

GI number: 162147930

Start: 2199227

End: 2200330

Strand: Reverse

Name: mmpA [C]

Synonym: GDI_2146

Alternate gene names: 162147930

Gene position: 2200330-2199227 (Counterclockwise)

Preceding gene: 162147931

Following gene: 162147929

Centisome position: 55.79

GC content: 67.39

Gene sequence:

>1104_bases
ATGCCCGATCTGCTTCGGACCGTCCTTGCCTTTGCCCTGGTGCTGGGCGTGCTGGTCTTCATCCACGAACTCGGCCACTA
CCTGGCCGCGCGCTGGCGGGGCGTGCATGTCGAGGTATTTTCGATCGGGTTCGGGCGTCCCCTGCTGCGCTGGCATGACA
AGGTCGGGACGGAATGGCGGATCTGCCCGCTGCCCCTGGGCGGCTATGTCAAGCCGCATGGCTTCGAAGGGCCGGAAGAG
GCGACGCCGGAACAGATGGCGGCCTGGCAGCCCGGACGGACCTTCCATGACAAGCCGGTCCTGTCCCGCGCCATCGTGAT
CGTTGCCGGGCCGGTCTTCAACTTCCTGCTGGCCATCGTGCTGTTCGCGGGCCTGTTCGCCACCGTGGGGCGGCCGGAAA
TCCGCAACGTCGTGGGGCAGGTCCTGCCGGGAAGCGCCGCGGCTTCGGCCGGCGTGAAGCCGAACGACGCCATCGTGCGG
ATCGGCGACCACGTGGTGGCGGACGTGGCGGACATCCAGGCCCGCATTTCGGCCGAACCGGGGGAAAAGACGGTCCTTAC
GGTCCGCCGTGCCGGGCAGGACGTGACCCTGCCGGTGACGGTCGGCTCCGTGACCGATTCATCGGGAAGCCATGCGGGGC
AACTGGGCGTGATGTTCACCGCGACGGTGGGCAAGCCGATGGCGCTGCCCGCCGCGATCGTCGCCGCGGGGCAGGAGACA
TGGCACCTGGTGGTGCAGACGCTGGCCGGGCTGTGGCAGATGCTGACCGGGCAGCATAGCGCCAAGGACCTGGGCGGTCC
GCTGCGCATCGCCCAGATGTCGGGCCAGGTTGCGCAGTACGGCGTGGCCAGCCTGGTGTCCTTCATGGCGCTGCTGTCGA
TCAACCTGGGCCTGATCAACCTGTTTCCCATCCCGGTGCTGGATGGCGGCCGGCTGGTTTTCTACGCGCTGGAAGCCGTG
CTGGGGCGTCCCGTATCCCGGCGGGTGCGCGATATCAGTTTCCAGGCCGGTTTCGCGGTCATCGCGGGCCTGTTCCTGTT
TTCGACGTTCAACGACCTGTCGCATTTCGGACTGTTTCGATGGGTCGCATCCCTGGCCGGATGA

Upstream 100 bases:

>100_bases
GGCGGCCCGCCTGCGCACGGCATCACTCGCGGCCTGATCCGACGCGGCCAGTTCCGGCCCAGGTTCGGCGACGATCTTTA
TCAGGAGTTAGCCCGTCATT

Downstream 100 bases:

>100_bases
TGCCATGATCACGAGGTCATGGAGGCGCTTGCGCGACGGGGGGATTTTCGGATACCTCCGCCAAGCGGATATGATCGACA
GGAAGCACGCGGCGAATCCG

Product: metalloprotease mmpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MPDLLRTVLAFALVLGVLVFIHELGHYLAARWRGVHVEVFSIGFGRPLLRWHDKVGTEWRICPLPLGGYVKPHGFEGPEE
ATPEQMAAWQPGRTFHDKPVLSRAIVIVAGPVFNFLLAIVLFAGLFATVGRPEIRNVVGQVLPGSAAASAGVKPNDAIVR
IGDHVVADVADIQARISAEPGEKTVLTVRRAGQDVTLPVTVGSVTDSSGSHAGQLGVMFTATVGKPMALPAAIVAAGQET
WHLVVQTLAGLWQMLTGQHSAKDLGGPLRIAQMSGQVAQYGVASLVSFMALLSINLGLINLFPIPVLDGGRLVFYALEAV
LGRPVSRRVRDISFQAGFAVIAGLFLFSTFNDLSHFGLFRWVASLAG

Sequences:

>Translated_367_residues
MPDLLRTVLAFALVLGVLVFIHELGHYLAARWRGVHVEVFSIGFGRPLLRWHDKVGTEWRICPLPLGGYVKPHGFEGPEE
ATPEQMAAWQPGRTFHDKPVLSRAIVIVAGPVFNFLLAIVLFAGLFATVGRPEIRNVVGQVLPGSAAASAGVKPNDAIVR
IGDHVVADVADIQARISAEPGEKTVLTVRRAGQDVTLPVTVGSVTDSSGSHAGQLGVMFTATVGKPMALPAAIVAAGQET
WHLVVQTLAGLWQMLTGQHSAKDLGGPLRIAQMSGQVAQYGVASLVSFMALLSINLGLINLFPIPVLDGGRLVFYALEAV
LGRPVSRRVRDISFQAGFAVIAGLFLFSTFNDLSHFGLFRWVASLAG
>Mature_366_residues
PDLLRTVLAFALVLGVLVFIHELGHYLAARWRGVHVEVFSIGFGRPLLRWHDKVGTEWRICPLPLGGYVKPHGFEGPEEA
TPEQMAAWQPGRTFHDKPVLSRAIVIVAGPVFNFLLAIVLFAGLFATVGRPEIRNVVGQVLPGSAAASAGVKPNDAIVRI
GDHVVADVADIQARISAEPGEKTVLTVRRAGQDVTLPVTVGSVTDSSGSHAGQLGVMFTATVGKPMALPAAIVAAGQETW
HLVVQTLAGLWQMLTGQHSAKDLGGPLRIAQMSGQVAQYGVASLVSFMALLSINLGLINLFPIPVLDGGRLVFYALEAVL
GRPVSRRVRDISFQAGFAVIAGLFLFSTFNDLSHFGLFRWVASLAG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=237, Percent_Identity=33.7552742616034, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 39140; Mature: 39009

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLLRTVLAFALVLGVLVFIHELGHYLAARWRGVHVEVFSIGFGRPLLRWHDKVGTEWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCEE
ICPLPLGGYVKPHGFEGPEEATPEQMAAWQPGRTFHDKPVLSRAIVIVAGPVFNFLLAIV
EECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHEEHEEECHHHHHHHHHH
LFAGLFATVGRPEIRNVVGQVLPGSAAASAGVKPNDAIVRIGDHVVADVADIQARISAEP
HHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC
GEKTVLTVRRAGQDVTLPVTVGSVTDSSGSHAGQLGVMFTATVGKPMALPAAIVAAGQET
CCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCHH
WHLVVQTLAGLWQMLTGQHSAKDLGGPLRIAQMSGQVAQYGVASLVSFMALLSINLGLIN
HHHHHHHHHHHHHHHCCCCCHHHCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE
LFPIPVLDGGRLVFYALEAVLGRPVSRRVRDISFQAGFAVIAGLFLFSTFNDLSHFGLFR
EECCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVASLAG
HHHHHCC
>Mature Secondary Structure 
PDLLRTVLAFALVLGVLVFIHELGHYLAARWRGVHVEVFSIGFGRPLLRWHDKVGTEWR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCEE
ICPLPLGGYVKPHGFEGPEEATPEQMAAWQPGRTFHDKPVLSRAIVIVAGPVFNFLLAIV
EECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHEEHEEECHHHHHHHHHH
LFAGLFATVGRPEIRNVVGQVLPGSAAASAGVKPNDAIVRIGDHVVADVADIQARISAEP
HHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC
GEKTVLTVRRAGQDVTLPVTVGSVTDSSGSHAGQLGVMFTATVGKPMALPAAIVAAGQET
CCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCHH
WHLVVQTLAGLWQMLTGQHSAKDLGGPLRIAQMSGQVAQYGVASLVSFMALLSINLGLIN
HHHHHHHHHHHHHHHCCCCCHHHCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE
LFPIPVLDGGRLVFYALEAVLGRPVSRRVRDISFQAGFAVIAGLFLFSTFNDLSHFGLFR
EECCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVASLAG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]