| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yaeT [H]
Identifier: 162147929
GI number: 162147929
Start: 2196657
End: 2198969
Strand: Reverse
Name: yaeT [H]
Synonym: GDI_2145
Alternate gene names: 162147929
Gene position: 2198969-2196657 (Counterclockwise)
Preceding gene: 162147930
Following gene: 162147928
Centisome position: 55.75
GC content: 61.0
Gene sequence:
>2313_bases GTGGCGCATACGCCCACGGGCGGGGTCATCGAATCGATCGACATTTCCGGCAACGACCGTATCGAGACCAACACGGTCCT GTCCTACATGGTCGTGCAGCCCGGCGACCCGTTCAACCAGGACCAGCTCGACCGGTCCCTCAAGACGCTGTACGCCACCG GCCTGTTCCGCGACGTGACGCTGCACCGCGCCGGCAACGTGCTGCAGGTGCACCTGGTCGAGAACCCGATCGTGAATCGC ATCGTCTTCGAAGGCAACCATGCCGCGAAGGACGAGGACCTGCGCAAGGTGATCGCGCTGCGGCCGCGCGCCGTCTTCTC GACGCAGACCACGGCAGCCGACCGGCAGAAGATCCTGGGCGTCTATGCCGAGAAGGCACGCTATGCCGCGACGGTGACGC CGCAGATCATCCGCCTGTCGCATAACCGTGTGGATGTGGTCTTCCAAATCAACGAGGCGACGCAGACACTGATCAAGAAG ATCTCGTTCGTCGGCAACCGCGCGTTCAGCGAGGCCCGGCTGGCGCAGGTGGTCTCGTCCAAGGAAACGGCCTGGTACCG CTTCTTCGCCTCGTCGGATGAATATAATCCCGAGCGCCTGCGCTATGACGGCGAATTGCTGCGCCGCTTCTACCTGCGTA ACGGGTTCGTCGATTTCCAGGTGAAGAACGCCACGGGCGAACTGTCGCCGGATCGCAAGTCCTTCTACGTGACCTTCACG GTAGACGAAGGCCTGCGCTATCGCCTCGGTCGGGTGAACATCCGCTCGTCCCTCAAGCATGTCCCCGCCGCGTCGCTGCG CAAATATATCGAACTGTTCGCGAACCAGTGGTACGACGGCAGTGCGGTCCAGCACAACGCGACGGACATGGAGGAAATCC TGCAGGGCCAGGGGCATCCCTTCGCGATGGTGCGCCCCGAAATCGCCCGCAATCCGGAAAAGCGCACCGTCGACCTGCTG TTCGACGTCAGCGAGGGCCCGCGGGTATATGTCGAACGCATCGACATCAACGGCAACACCATTACCGAGGACAAGGTCAT CCGGCGCAACCTGCCGATGGCCGAGGGCGATCCGTACACCCCGAGCGAGCGCAAATACGCCAAGGCTATGCTACAGGATC TGGGATATTTCAGTTCGGTTTCGATCGACCAGAGCCCCGGTTCGGCACCGGACAAGATAAACGTGGCCGCCAACCTGGTC GAAAAGCCGACCGGGGAGTTCTCACTGGGTGGCGGCTATTCGACCGACGTGGGTATCCTGGGCAATATCGGGCTGAAGCA GCATAACCTGCTGGGGTCGGGCGTTGATGCTGGAATTTCCGGCACCATGGCGTATTACCAGCGGCAGGCCGATATTTCGG TCAGTGACCCCTACTTCCTGAATCGTAACATGGTGGCGGGTGTCGATATCTTCGCCATCCAGAACAACTACCAGACCTAT CAGAACTATTCGGAAGGGCGGTACGGCATCTCGTTCCGCATGGGGTACTCGTACAACAACCACCTGTCGCAGTCGTTCAG CTATTCGCTGACGGATCGTGACATCGACAATGCGTACAGCGATGCGTCGTGGTACGTGCTGAAGCAGACGGGCTGGTCGC TGCTGTCGCAGCTCAGCACTACGCTGACCTATGACACGCGTGACAACCGCATGAATCCGCACAGCGGCTATGTGGTCCGT CTGGCGGGTGATTTCGCCGGTATCGGTGGAAACGAGCGTTATCTGCGCGGCAAGCTCGATGCCGCCTATTACATTCCGCT GGACGACCTGATGGGCAACCACGACTGGACGGTCGCGCTGACCGCCGGAGCGGGTGACATCGTGAACTGGGGCGGCGGCC GCAGCGACATCATCGACAACTTCTACCTGGGCGGCAGCACGCTGCGCGGCTTCATGGATGGCGGCGCCGGCCCCCGTACC ATGGGCATCCCCGCTTATACGTGGCAGGGTGTCACCTACCCGATGCATTCGCAGGAGGACTTCCTGGGCGGCCGCTTCAT GTATACCGGTTCGGCCACCGTCAATTTCCCGATGCCGCTGGCGGCGGATATGGGCATCAAGGGCCGCTATTTCGTCGATA TGGGCGGCCTGGACGGGCTGCGTATCCCGCGGCGCTATACCGCCTATCCGCAGGATATGCCCTATTATACGCCGGTCTAT AGCGACACGATCAAGCCGCGTGTCAGCACGGGCGTGGGCTTTTCGTGGAAGAGCCCATTCGGCCTGATCAATATCGACCT TGGTATTCCGGTCCTGAAGGAAAAACATGACCGGACCCAATTGTTCCGCTTTGGCTTCGGCCAGCAATTCTGA
Upstream 100 bases:
>100_bases GCCGACTAAACGTTCAACGCTTCTTGCGTCGGTTTGCCTCATACCGCTGTTTTTCGCCGGGGCCGCCGAGGCACGGCAGG GCGTTGCGACGCGGGGCCCG
Downstream 100 bases:
>100_bases GGTGACAATGCTTCGTTCTCGTGGCGTATCCGCCCTGGTCGCGGCCGTCGTGATGTCCTGCGCCGGCCTGCCGTCCACCG CAGCCCTGGCCCAGGGGGCA
Product: outer membrane protein assembly factor yaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 770; Mature: 769
Protein sequence:
>770_residues MAHTPTGGVIESIDISGNDRIETNTVLSYMVVQPGDPFNQDQLDRSLKTLYATGLFRDVTLHRAGNVLQVHLVENPIVNR IVFEGNHAAKDEDLRKVIALRPRAVFSTQTTAADRQKILGVYAEKARYAATVTPQIIRLSHNRVDVVFQINEATQTLIKK ISFVGNRAFSEARLAQVVSSKETAWYRFFASSDEYNPERLRYDGELLRRFYLRNGFVDFQVKNATGELSPDRKSFYVTFT VDEGLRYRLGRVNIRSSLKHVPAASLRKYIELFANQWYDGSAVQHNATDMEEILQGQGHPFAMVRPEIARNPEKRTVDLL FDVSEGPRVYVERIDINGNTITEDKVIRRNLPMAEGDPYTPSERKYAKAMLQDLGYFSSVSIDQSPGSAPDKINVAANLV EKPTGEFSLGGGYSTDVGILGNIGLKQHNLLGSGVDAGISGTMAYYQRQADISVSDPYFLNRNMVAGVDIFAIQNNYQTY QNYSEGRYGISFRMGYSYNNHLSQSFSYSLTDRDIDNAYSDASWYVLKQTGWSLLSQLSTTLTYDTRDNRMNPHSGYVVR LAGDFAGIGGNERYLRGKLDAAYYIPLDDLMGNHDWTVALTAGAGDIVNWGGGRSDIIDNFYLGGSTLRGFMDGGAGPRT MGIPAYTWQGVTYPMHSQEDFLGGRFMYTGSATVNFPMPLAADMGIKGRYFVDMGGLDGLRIPRRYTAYPQDMPYYTPVY SDTIKPRVSTGVGFSWKSPFGLINIDLGIPVLKEKHDRTQLFRFGFGQQF
Sequences:
>Translated_770_residues MAHTPTGGVIESIDISGNDRIETNTVLSYMVVQPGDPFNQDQLDRSLKTLYATGLFRDVTLHRAGNVLQVHLVENPIVNR IVFEGNHAAKDEDLRKVIALRPRAVFSTQTTAADRQKILGVYAEKARYAATVTPQIIRLSHNRVDVVFQINEATQTLIKK ISFVGNRAFSEARLAQVVSSKETAWYRFFASSDEYNPERLRYDGELLRRFYLRNGFVDFQVKNATGELSPDRKSFYVTFT VDEGLRYRLGRVNIRSSLKHVPAASLRKYIELFANQWYDGSAVQHNATDMEEILQGQGHPFAMVRPEIARNPEKRTVDLL FDVSEGPRVYVERIDINGNTITEDKVIRRNLPMAEGDPYTPSERKYAKAMLQDLGYFSSVSIDQSPGSAPDKINVAANLV EKPTGEFSLGGGYSTDVGILGNIGLKQHNLLGSGVDAGISGTMAYYQRQADISVSDPYFLNRNMVAGVDIFAIQNNYQTY QNYSEGRYGISFRMGYSYNNHLSQSFSYSLTDRDIDNAYSDASWYVLKQTGWSLLSQLSTTLTYDTRDNRMNPHSGYVVR LAGDFAGIGGNERYLRGKLDAAYYIPLDDLMGNHDWTVALTAGAGDIVNWGGGRSDIIDNFYLGGSTLRGFMDGGAGPRT MGIPAYTWQGVTYPMHSQEDFLGGRFMYTGSATVNFPMPLAADMGIKGRYFVDMGGLDGLRIPRRYTAYPQDMPYYTPVY SDTIKPRVSTGVGFSWKSPFGLINIDLGIPVLKEKHDRTQLFRFGFGQQF >Mature_769_residues AHTPTGGVIESIDISGNDRIETNTVLSYMVVQPGDPFNQDQLDRSLKTLYATGLFRDVTLHRAGNVLQVHLVENPIVNRI VFEGNHAAKDEDLRKVIALRPRAVFSTQTTAADRQKILGVYAEKARYAATVTPQIIRLSHNRVDVVFQINEATQTLIKKI SFVGNRAFSEARLAQVVSSKETAWYRFFASSDEYNPERLRYDGELLRRFYLRNGFVDFQVKNATGELSPDRKSFYVTFTV DEGLRYRLGRVNIRSSLKHVPAASLRKYIELFANQWYDGSAVQHNATDMEEILQGQGHPFAMVRPEIARNPEKRTVDLLF DVSEGPRVYVERIDINGNTITEDKVIRRNLPMAEGDPYTPSERKYAKAMLQDLGYFSSVSIDQSPGSAPDKINVAANLVE KPTGEFSLGGGYSTDVGILGNIGLKQHNLLGSGVDAGISGTMAYYQRQADISVSDPYFLNRNMVAGVDIFAIQNNYQTYQ NYSEGRYGISFRMGYSYNNHLSQSFSYSLTDRDIDNAYSDASWYVLKQTGWSLLSQLSTTLTYDTRDNRMNPHSGYVVRL AGDFAGIGGNERYLRGKLDAAYYIPLDDLMGNHDWTVALTAGAGDIVNWGGGRSDIIDNFYLGGSTLRGFMDGGAGPRTM GIPAYTWQGVTYPMHSQEDFLGGRFMYTGSATVNFPMPLAADMGIKGRYFVDMGGLDGLRIPRRYTAYPQDMPYYTPVYS DTIKPRVSTGVGFSWKSPFGLINIDLGIPVLKEKHDRTQLFRFGFGQQF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=810, Percent_Identity=29.2592592592593, Blast_Score=304, Evalue=1e-83,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 86225; Mature: 86094
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTPTGGVIESIDISGNDRIETNTVLSYMVVQPGDPFNQDQLDRSLKTLYATGLFRDVT CCCCCCCCCEEEEECCCCCCEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEH LHRAGNVLQVHLVENPIVNRIVFEGNHAAKDEDLRKVIALRPRAVFSTQTTAADRQKILG HHCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHH VYAEKARYAATVTPQIIRLSHNRVDVVFQINEATQTLIKKISFVGNRAFSEARLAQVVSS HHHHHCCEEEECCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHC KETAWYRFFASSDEYNPERLRYDGELLRRFYLRNGFVDFQVKNATGELSPDRKSFYVTFT CCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEEE VDEGLRYRLGRVNIRSSLKHVPAASLRKYIELFANQWYDGSAVQHNATDMEEILQGQGHP ECCCCEEEECEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC FAMVRPEIARNPEKRTVDLLFDVSEGPRVYVERIDINGNTITEDKVIRRNLPMAEGDPYT EEEECCHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCEECCCHHHHHCCCCCCCCCCC PSERKYAKAMLQDLGYFSSVSIDQSPGSAPDKINVAANLVEKPTGEFSLGGGYSTDVGIL CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHCCCCCEECCCCCCCCCEEE GNIGLKQHNLLGSGVDAGISGTMAYYQRQADISVSDPYFLNRNMVAGVDIFAIQNNYQTY ECCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCEEECCCEEECEEEEEEECCCHHH QNYSEGRYGISFRMGYSYNNHLSQSFSYSLTDRDIDNAYSDASWYVLKQTGWSLLSQLST HCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHH TLTYDTRDNRMNPHSGYVVRLAGDFAGIGGNERYLRGKLDAAYYIPLDDLMGNHDWTVAL HEEECCCCCCCCCCCCEEEEEECCEECCCCCCCEEEECCCEEEEEEHHHHCCCCCEEEEE TAGAGDIVNWGGGRSDIIDNFYLGGSTLRGFMDGGAGPRTMGIPAYTWQGVTYPMHSQED ECCCCCEEECCCCCHHHHHCEEECCHHHHHHHCCCCCCCCCCCCCEEECCEECCCCCCCC FLGGRFMYTGSATVNFPMPLAADMGIKGRYFVDMGGLDGLRIPRRYTAYPQDMPYYTPVY CCCCEEEEECCEEEECCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC SDTIKPRVSTGVGFSWKSPFGLINIDLGIPVLKEKHDRTQLFRFGFGQQF CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCHHHHHHCCCCCCC >Mature Secondary Structure AHTPTGGVIESIDISGNDRIETNTVLSYMVVQPGDPFNQDQLDRSLKTLYATGLFRDVT CCCCCCCCEEEEECCCCCCEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEH LHRAGNVLQVHLVENPIVNRIVFEGNHAAKDEDLRKVIALRPRAVFSTQTTAADRQKILG HHCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHH VYAEKARYAATVTPQIIRLSHNRVDVVFQINEATQTLIKKISFVGNRAFSEARLAQVVSS HHHHHCCEEEECCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHC KETAWYRFFASSDEYNPERLRYDGELLRRFYLRNGFVDFQVKNATGELSPDRKSFYVTFT CCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEEE VDEGLRYRLGRVNIRSSLKHVPAASLRKYIELFANQWYDGSAVQHNATDMEEILQGQGHP ECCCCEEEECEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC FAMVRPEIARNPEKRTVDLLFDVSEGPRVYVERIDINGNTITEDKVIRRNLPMAEGDPYT EEEECCHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCEECCCHHHHHCCCCCCCCCCC PSERKYAKAMLQDLGYFSSVSIDQSPGSAPDKINVAANLVEKPTGEFSLGGGYSTDVGIL CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHCCCCCEECCCCCCCCCEEE GNIGLKQHNLLGSGVDAGISGTMAYYQRQADISVSDPYFLNRNMVAGVDIFAIQNNYQTY ECCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCEEECCCEEECEEEEEEECCCHHH QNYSEGRYGISFRMGYSYNNHLSQSFSYSLTDRDIDNAYSDASWYVLKQTGWSLLSQLST HCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHH TLTYDTRDNRMNPHSGYVVRLAGDFAGIGGNERYLRGKLDAAYYIPLDDLMGNHDWTVAL HEEECCCCCCCCCCCCEEEEEECCEECCCCCCCEEEECCCEEEEEEHHHHCCCCCEEEEE TAGAGDIVNWGGGRSDIIDNFYLGGSTLRGFMDGGAGPRTMGIPAYTWQGVTYPMHSQED ECCCCCEEECCCCCHHHHHCEEECCHHHHHHHCCCCCCCCCCCCCEEECCEECCCCCCCC FLGGRFMYTGSATVNFPMPLAADMGIKGRYFVDMGGLDGLRIPRRYTAYPQDMPYYTPVY CCCCEEEEECCEEEECCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC SDTIKPRVSTGVGFSWKSPFGLINIDLGIPVLKEKHDRTQLFRFGFGQQF CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA