| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162147928
Identifier: 162147928
GI number: 162147928
Start: 2195765
End: 2196655
Strand: Reverse
Name: 162147928
Synonym: GDI_2144
Alternate gene names: NA
Gene position: 2196655-2195765 (Counterclockwise)
Preceding gene: 162147929
Following gene: 162147927
Centisome position: 55.69
GC content: 71.83
Gene sequence:
>891_bases GTGACAATGCTTCGTTCTCGTGGCGTATCCGCCCTGGTCGCGGCCGTCGTGATGTCCTGCGCCGGCCTGCCGTCCACCGC AGCCCTGGCCCAGGGGGCAGCGGCATCCGGTGGAAATGCCGGCTGGTTCGTGCCCAAGTCCGCGCAACCTGCCGCCGGAA CGGCCGCCCCGCGCGGGCCCGCGCGTACCGCTCCGGTGCCGCTGCCCGCCGCCCCCGCCGACAGTGACGACGCCCAGTCC CAGACGCCGCCGGTCCTGCCGATGCCGCCGGTTCCCGCCTCGCCGGACATTCCGCGCGGCGTGGCCCCGCCGGTGCCGGT CATCGGCGTCATCAGCGTGCCCGACGTGATGCGCCTGTCCAGTGCCGCGCAGCAGGCCGAGCGCGTCCTGGGCGCCCGGC GCGACGAGCTGGCCCGCGACGCGCAGAAGGAACAGGGCGGCTGGCGCGACGAGCAGCAGAAGCTGCAGGCCCAGGCCAAG AACATGGCGTCGGACCAGATCCAGTTGCGTGAGCGTCGCCTGCAGGAACGCGTGATCGCCGCCCAGCGCGATTTCCGCAA CCGCAACCGGATCATCCAGGAAGCGGCGCAGGTCTCGCTGAACCAGATCGAGCGCGAACTGGTCCAGATCCTTCGCCAGG TCGCCGGAAGCCGCGGCATGAACCTTGTGCTGCATCGCGAGCAGGTCGCGCTCAGCCAGGACGGACTGGACATCACGCAG CAGGTTGCCGACCAGTTGAACAAGGTCCTGCCGACCGTGTTCATCCCGGCGGCGAATGTCGATCCCGAGGAACTGGCGAA GTCCGGCACGATGCCGACGACGGCCGATGCCGGCCGGCAGGCGGCGCCTGCCCCGACACCCGCGCCGGTCGCGGCGACGG CCCGGCACTGA
Upstream 100 bases:
>100_bases CCATTCGGCCTGATCAATATCGACCTTGGTATTCCGGTCCTGAAGGAAAAACATGACCGGACCCAATTGTTCCGCTTTGG CTTCGGCCAGCAATTCTGAG
Downstream 100 bases:
>100_bases CGGGCGCCAGCGCAATGGAAAGGCAGGACGCGGCCCTGCCGGGGGACCGGCGGTTCTTCGAGCGGAACGGCCCGTTCTCG CTCCGGGCACTGGCGGAATG
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein OmpH; Outer Membrane Chaperone Skp; Outer Membrane Protien
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTMLRSRGVSALVAAVVMSCAGLPSTAALAQGAAASGGNAGWFVPKSAQPAAGTAAPRGPARTAPVPLPAAPADSDDAQS QTPPVLPMPPVPASPDIPRGVAPPVPVIGVISVPDVMRLSSAAQQAERVLGARRDELARDAQKEQGGWRDEQQKLQAQAK NMASDQIQLRERRLQERVIAAQRDFRNRNRIIQEAAQVSLNQIERELVQILRQVAGSRGMNLVLHREQVALSQDGLDITQ QVADQLNKVLPTVFIPAANVDPEELAKSGTMPTTADAGRQAAPAPTPAPVAATARH
Sequences:
>Translated_296_residues MTMLRSRGVSALVAAVVMSCAGLPSTAALAQGAAASGGNAGWFVPKSAQPAAGTAAPRGPARTAPVPLPAAPADSDDAQS QTPPVLPMPPVPASPDIPRGVAPPVPVIGVISVPDVMRLSSAAQQAERVLGARRDELARDAQKEQGGWRDEQQKLQAQAK NMASDQIQLRERRLQERVIAAQRDFRNRNRIIQEAAQVSLNQIERELVQILRQVAGSRGMNLVLHREQVALSQDGLDITQ QVADQLNKVLPTVFIPAANVDPEELAKSGTMPTTADAGRQAAPAPTPAPVAATARH >Mature_295_residues TMLRSRGVSALVAAVVMSCAGLPSTAALAQGAAASGGNAGWFVPKSAQPAAGTAAPRGPARTAPVPLPAAPADSDDAQSQ TPPVLPMPPVPASPDIPRGVAPPVPVIGVISVPDVMRLSSAAQQAERVLGARRDELARDAQKEQGGWRDEQQKLQAQAKN MASDQIQLRERRLQERVIAAQRDFRNRNRIIQEAAQVSLNQIERELVQILRQVAGSRGMNLVLHREQVALSQDGLDITQQ VADQLNKVLPTVFIPAANVDPEELAKSGTMPTTADAGRQAAPAPTPAPVAATARH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31126; Mature: 30995
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLRSRGVSALVAAVVMSCAGLPSTAALAQGAAASGGNAGWFVPKSAQPAAGTAAPRGP CCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCC ARTAPVPLPAAPADSDDAQSQTPPVLPMPPVPASPDIPRGVAPPVPVIGVISVPDVMRLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHH SAAQQAERVLGARRDELARDAQKEQGGWRDEQQKLQAQAKNMASDQIQLRERRLQERVIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRDFRNRNRIIQEAAQVSLNQIERELVQILRQVAGSRGMNLVLHREQVALSQDGLDITQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCHHHH QVADQLNKVLPTVFIPAANVDPEELAKSGTMPTTADAGRQAAPAPTPAPVAATARH HHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TMLRSRGVSALVAAVVMSCAGLPSTAALAQGAAASGGNAGWFVPKSAQPAAGTAAPRGP CCHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCC ARTAPVPLPAAPADSDDAQSQTPPVLPMPPVPASPDIPRGVAPPVPVIGVISVPDVMRLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHH SAAQQAERVLGARRDELARDAQKEQGGWRDEQQKLQAQAKNMASDQIQLRERRLQERVIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRDFRNRNRIIQEAAQVSLNQIERELVQILRQVAGSRGMNLVLHREQVALSQDGLDITQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCHHHH QVADQLNKVLPTVFIPAANVDPEELAKSGTMPTTADAGRQAAPAPTPAPVAATARH HHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA