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The map label for this gene is ybjT [C]

Identifier: 162147897

GI number: 162147897

Start: 2167550

End: 2168473

Strand: Reverse

Name: ybjT [C]

Synonym: GDI_2113

Alternate gene names: 162147897

Gene position: 2168473-2167550 (Counterclockwise)

Preceding gene: 162147905

Following gene: 162147896

Centisome position: 54.98

GC content: 70.24

Gene sequence:

>924_bases
ATGGCGACTCGTAAAGTGGCGGCGGTCATCGGGGGTTCGGGTTTTCTCGGCCGCTACGTGGTCCGGCGCCTGGCCGAGGA
CGGATATGTCGTCCGGGTGGCCGCGCGGCGTGCCGACCTGGCGGCGGCGCTGCGTCCGCTGGGCGATGTCGGGCAGATCG
TGCCGCTCGGGGCGTCGATCCTGGACGAGGACTCGCTGGTGCCGGTGGTCGAGAGCGCGCAGGTGGTCGTGAACCTGGTG
GGCATCCTGGCCGAACGCGGCCGGGCGACGTTCCAGGCCGTGCATGTCGATGGCGCGGCGCGCGTGGCCCGGCTGGCGGC
GTCGGCGGGGGTCGGGCGGCTGCTGCACGTCTCGGCCATCGGCGCGTCGCCGGACAGCCGCTCGGCCTACGGCCGCAGCA
AGGCGGCCGGCGAGGAGGCGGTGCTGCGCAACATGCCCGAGGCGACGATCGTGCGTCCGTCGATCCTGTTCGGGCCGGAG
GACCGGTTCACCAACCTGTTCGCCGCACTGGCGCGATACAGCCCGGTCATGCCGGTCTATGGCGCGGCGACGCGCATCCA
GCCGGTCTATGCCGCCGACGTGGCCGAGGGCATCCGCCGCATCCTGGCCGGCGAGGGGCACAGTGGCGAGATCTATGAAT
TCGGCGGCCCCGCGATCTGGACGATGGAGGGTGTCATGCGCTGGATCGTGGCCACGCTCGGCCGCAGCCGGCTGATCTTC
CCCATGCCTGGCGCGCTGGCCTGGTGGCAGGCGATGTGGCTGGAGCATCTGCCGGGCCGGATGCTGACCCGCGACCAATT
GACGATGCTGTCGGTGGACAATGTGGCGTCGGAAGGCACCCCCGGCCTGCGCCTGTTGGGGATCGATGCCGTGCCGATGG
AAATGATCGCGCCGTCCTACCTCAGCCGATACAAAATTACATAA

Upstream 100 bases:

>100_bases
GGTGACGGCGTGGCGGGCGGCGGCCCGTATGATATCGTCGCTTTAAACAACGGCCTGGCACGCGGATGCGGCGTGGGGCG
GGCGCAAAAGGGGGACGGAC

Downstream 100 bases:

>100_bases
ATGATCAAAGTCAACGCATTATCTGGCTGATTGGTCCGATACGGACCAATTTTGCGATCTGGTCATCGGGCCGATTTGAG
GTATCGCCGCGTTTTTTGTC

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Male Sterility-Like Protein; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MATRKVAAVIGGSGFLGRYVVRRLAEDGYVVRVAARRADLAAALRPLGDVGQIVPLGASILDEDSLVPVVESAQVVVNLV
GILAERGRATFQAVHVDGAARVARLAASAGVGRLLHVSAIGASPDSRSAYGRSKAAGEEAVLRNMPEATIVRPSILFGPE
DRFTNLFAALARYSPVMPVYGAATRIQPVYAADVAEGIRRILAGEGHSGEIYEFGGPAIWTMEGVMRWIVATLGRSRLIF
PMPGALAWWQAMWLEHLPGRMLTRDQLTMLSVDNVASEGTPGLRLLGIDAVPMEMIAPSYLSRYKIT

Sequences:

>Translated_307_residues
MATRKVAAVIGGSGFLGRYVVRRLAEDGYVVRVAARRADLAAALRPLGDVGQIVPLGASILDEDSLVPVVESAQVVVNLV
GILAERGRATFQAVHVDGAARVARLAASAGVGRLLHVSAIGASPDSRSAYGRSKAAGEEAVLRNMPEATIVRPSILFGPE
DRFTNLFAALARYSPVMPVYGAATRIQPVYAADVAEGIRRILAGEGHSGEIYEFGGPAIWTMEGVMRWIVATLGRSRLIF
PMPGALAWWQAMWLEHLPGRMLTRDQLTMLSVDNVASEGTPGLRLLGIDAVPMEMIAPSYLSRYKIT
>Mature_306_residues
ATRKVAAVIGGSGFLGRYVVRRLAEDGYVVRVAARRADLAAALRPLGDVGQIVPLGASILDEDSLVPVVESAQVVVNLVG
ILAERGRATFQAVHVDGAARVARLAASAGVGRLLHVSAIGASPDSRSAYGRSKAAGEEAVLRNMPEATIVRPSILFGPED
RFTNLFAALARYSPVMPVYGAATRIQPVYAADVAEGIRRILAGEGHSGEIYEFGGPAIWTMEGVMRWIVATLGRSRLIFP
MPGALAWWQAMWLEHLPGRMLTRDQLTMLSVDNVASEGTPGLRLLGIDAVPMEMIAPSYLSRYKIT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=304, Percent_Identity=37.828947368421, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17556106, Length=237, Percent_Identity=32.0675105485232, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24667554, Length=235, Percent_Identity=35.3191489361702, Blast_Score=132, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 32815; Mature: 32683

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRKVAAVIGGSGFLGRYVVRRLAEDGYVVRVAARRADLAAALRPLGDVGQIVPLGASI
CCCHHEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHCCHHH
LDEDSLVPVVESAQVVVNLVGILAERGRATFQAVHVDGAARVARLAASAGVGRLLHVSAI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCCCEEEEEEE
GASPDSRSAYGRSKAAGEEAVLRNMPEATIVRPSILFGPEDRFTNLFAALARYSPVMPVY
CCCCCCCCCCCCCCCCCHHHHHHCCCCHHEECCCEEECCCHHHHHHHHHHHHCCCCCCCC
GAATRIQPVYAADVAEGIRRILAGEGHSGEIYEFGGPAIWTMEGVMRWIVATLGRSRLIF
CCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHHHHCCCCEEEE
PMPGALAWWQAMWLEHLPGRMLTRDQLTMLSVDNVASEGTPGLRLLGIDAVPMEMIAPSY
ECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHH
LSRYKIT
HHHCCCC
>Mature Secondary Structure 
ATRKVAAVIGGSGFLGRYVVRRLAEDGYVVRVAARRADLAAALRPLGDVGQIVPLGASI
CCHHEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHCCHHH
LDEDSLVPVVESAQVVVNLVGILAERGRATFQAVHVDGAARVARLAASAGVGRLLHVSAI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCCCEEEEEEE
GASPDSRSAYGRSKAAGEEAVLRNMPEATIVRPSILFGPEDRFTNLFAALARYSPVMPVY
CCCCCCCCCCCCCCCCCHHHHHHCCCCHHEECCCEEECCCHHHHHHHHHHHHCCCCCCCC
GAATRIQPVYAADVAEGIRRILAGEGHSGEIYEFGGPAIWTMEGVMRWIVATLGRSRLIF
CCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHHHHCCCCEEEE
PMPGALAWWQAMWLEHLPGRMLTRDQLTMLSVDNVASEGTPGLRLLGIDAVPMEMIAPSY
ECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHH
LSRYKIT
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA