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The map label for this gene is yjbG [H]

Identifier: 162147894

GI number: 162147894

Start: 2159318

End: 2161165

Strand: Reverse

Name: yjbG [H]

Synonym: GDI_2110

Alternate gene names: 162147894

Gene position: 2161165-2159318 (Counterclockwise)

Preceding gene: 162147895

Following gene: 162147893

Centisome position: 54.79

GC content: 67.8

Gene sequence:

>1848_bases
ATGTCTGGACAGAATCTTTCCGCCTGGATCGACGGCCCGTGCGGGGGCCGGTGCGGGCGCGAGGCCGAGGGCGGGGCGAC
GGCCGGCACGGCCGGGGACCTGCCGCGCTGGGACCTGGGCGACCTGTATGACAGCCCCGAATCGGACAGGCTGCGGACCG
ACCTGAACCAGGCGGAAGCGGACGCGGCCGCGTTCGCCGATGTCTGGCGCGGGCGCCTGGCCGGGGCCTCGCCGGCCGCG
CTGGCGGAGGCGATCGCCGAATACCAGCGGATCGACGAGGTGCTGGGCCGTGCCGCGTCCTATGCGCAACTGCTGTTCGC
CGGCGATTCGTCCGATGCCGCGATCGGCCGGTTCTCGCAATCGGTGAACGAGCGGCTGACGGATATCTCGACCCATCTGC
TGTTCTTCACGTTGGAACTGAACCGCATCGGCGACGACGAGATGGCGGCGCGGCTGGCCGACCCGGCGCTGGCGGTCTGG
GCGCCGTTCCTGCGCGACCTGCGCGTCTTCCGCCCGCATCAATTGTCCGACGAGATCGAGCAGGTCCTGCACGAGAAATC
GGTCACCGGGGCGGCGGCGTGGTGCCGCCTGTTCGACGAGACGATGGCCGGCCTGCGTATCCCGCTGGACGACAGCCGGC
TTACGGTCGGCGAGGCGCTGAACCGGCTGTCGGACCCGGACCGCGCGGTGCGCGAACGGGCGGCCCGCGCCATCGGCGCC
GTGTTCGGCGACAATATCCGGCTGTTTTCGCTGATCACCAACACGCTGGCCAAGGACAAGGCGATTTCCGATTCGCTGCG
TCACTATCCGCGCCCGGGCTCCTACCGCAACCGCAGCAACATGGTCGAGGACGAGGTCGTGGACGCGCTGGTCCAGGCCG
TGACGACCGACTACCCGCGTCTGTCCCACCGCTATTACGCCCTGAAGGCGAAATGGCTGGGGCTGGAGAAGCTGGAACAT
TGGGACCGCAACGCCCCCCTGCCGTCGGCCGACGACCGGATCATCCCATGGGACCAGGCCACGCGGCAGGTGCTGGCGGC
CTATGAGGCGTTCGACCCGCGCATGGGCACCGTCGCGCGCCGGTTCTTCGACCATGCGTGGATCGATGCCGCACCCGCGC
CGGGCAAGGCGTCGGGCGCGTTCGCCCACCCCACGGTGCCGTCGGTCCATCCCTATCTGCTGCTGAACTATCACGGCCGT
ACCCGCGACGTGATGACCCTGGCGCACGAACTGGGGCACGGCGTGCACCAGGTGCTGGCCGCACCCCATGGCTACCTGAT
GTCGGGCACGCCGCTGACCCTGGCCGAGACCGCCAGCGTGTTCGGCGAAATGCTGACCTTCCGCGCGCTGCTGGATGCCG
AGACCGACCCCGCGCGCCGCCGGCTGATGCTGGCGGCCAAGGTCGAGGACATGCTGAACACCGTCGTCCGCCAGATCGCA
TTCTACCGGTTCGAGACCCTGGTGCATGCCGAGCGGAAATCGGGCGAATTGCTGCCCGAACGGATCGGCGCCATCTGGCG
GCAGGTCCAGACCGAAAGCCTGGGACCGGCGTTCAACTTCACCCCGGACTATGACGTCTACTGGACCTATGTCCCGCATT
TCATTCACTCTCCGTTCTACGTGTATGCCTATGCGTTCGGGGATTGCCTGGTGAATGCGCTCTATGGCGTGTTCCAGTCC
GGGCATGCGGGCTTCCAGGACAAATATCTGGACATGCTGCGCGCGGGCGGCACCATGCGGCATCGCGAATTGCTGGCGCC
GTTCGGGCTGGATGCGGCCGATCCCGGATTCTGGCGCAAGGGGCTGGATGTGATTGCCGGATTTATCGACGAGCTGGAGC
GTGCCTGA

Upstream 100 bases:

>100_bases
CCGATGATGTCGGCGGGGTCGCGCCCGCGCGCATTCCGCATTAGATGTTAGGCAGGATACGGTCACCGCGAACGCGGGAC
AGCAGGGTGGAGGCGCATCG

Downstream 100 bases:

>100_bases
CGTGGCGGAAGAACGGGATCTCGACAATACCGGGCTGTTCGGCGAATTCCGCCGGATGGTGCGGACCTCGGGCGCCGTCG
GCGGCATCGCGGCGCGGATC

Product: group B oligopeptidase pepB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MSGQNLSAWIDGPCGGRCGREAEGGATAGTAGDLPRWDLGDLYDSPESDRLRTDLNQAEADAAAFADVWRGRLAGASPAA
LAEAIAEYQRIDEVLGRAASYAQLLFAGDSSDAAIGRFSQSVNERLTDISTHLLFFTLELNRIGDDEMAARLADPALAVW
APFLRDLRVFRPHQLSDEIEQVLHEKSVTGAAAWCRLFDETMAGLRIPLDDSRLTVGEALNRLSDPDRAVRERAARAIGA
VFGDNIRLFSLITNTLAKDKAISDSLRHYPRPGSYRNRSNMVEDEVVDALVQAVTTDYPRLSHRYYALKAKWLGLEKLEH
WDRNAPLPSADDRIIPWDQATRQVLAAYEAFDPRMGTVARRFFDHAWIDAAPAPGKASGAFAHPTVPSVHPYLLLNYHGR
TRDVMTLAHELGHGVHQVLAAPHGYLMSGTPLTLAETASVFGEMLTFRALLDAETDPARRRLMLAAKVEDMLNTVVRQIA
FYRFETLVHAERKSGELLPERIGAIWRQVQTESLGPAFNFTPDYDVYWTYVPHFIHSPFYVYAYAFGDCLVNALYGVFQS
GHAGFQDKYLDMLRAGGTMRHRELLAPFGLDAADPGFWRKGLDVIAGFIDELERA

Sequences:

>Translated_615_residues
MSGQNLSAWIDGPCGGRCGREAEGGATAGTAGDLPRWDLGDLYDSPESDRLRTDLNQAEADAAAFADVWRGRLAGASPAA
LAEAIAEYQRIDEVLGRAASYAQLLFAGDSSDAAIGRFSQSVNERLTDISTHLLFFTLELNRIGDDEMAARLADPALAVW
APFLRDLRVFRPHQLSDEIEQVLHEKSVTGAAAWCRLFDETMAGLRIPLDDSRLTVGEALNRLSDPDRAVRERAARAIGA
VFGDNIRLFSLITNTLAKDKAISDSLRHYPRPGSYRNRSNMVEDEVVDALVQAVTTDYPRLSHRYYALKAKWLGLEKLEH
WDRNAPLPSADDRIIPWDQATRQVLAAYEAFDPRMGTVARRFFDHAWIDAAPAPGKASGAFAHPTVPSVHPYLLLNYHGR
TRDVMTLAHELGHGVHQVLAAPHGYLMSGTPLTLAETASVFGEMLTFRALLDAETDPARRRLMLAAKVEDMLNTVVRQIA
FYRFETLVHAERKSGELLPERIGAIWRQVQTESLGPAFNFTPDYDVYWTYVPHFIHSPFYVYAYAFGDCLVNALYGVFQS
GHAGFQDKYLDMLRAGGTMRHRELLAPFGLDAADPGFWRKGLDVIAGFIDELERA
>Mature_614_residues
SGQNLSAWIDGPCGGRCGREAEGGATAGTAGDLPRWDLGDLYDSPESDRLRTDLNQAEADAAAFADVWRGRLAGASPAAL
AEAIAEYQRIDEVLGRAASYAQLLFAGDSSDAAIGRFSQSVNERLTDISTHLLFFTLELNRIGDDEMAARLADPALAVWA
PFLRDLRVFRPHQLSDEIEQVLHEKSVTGAAAWCRLFDETMAGLRIPLDDSRLTVGEALNRLSDPDRAVRERAARAIGAV
FGDNIRLFSLITNTLAKDKAISDSLRHYPRPGSYRNRSNMVEDEVVDALVQAVTTDYPRLSHRYYALKAKWLGLEKLEHW
DRNAPLPSADDRIIPWDQATRQVLAAYEAFDPRMGTVARRFFDHAWIDAAPAPGKASGAFAHPTVPSVHPYLLLNYHGRT
RDVMTLAHELGHGVHQVLAAPHGYLMSGTPLTLAETASVFGEMLTFRALLDAETDPARRRLMLAAKVEDMLNTVVRQIAF
YRFETLVHAERKSGELLPERIGAIWRQVQTESLGPAFNFTPDYDVYWTYVPHFIHSPFYVYAYAFGDCLVNALYGVFQSG
HAGFQDKYLDMLRAGGTMRHRELLAPFGLDAADPGFWRKGLDVIAGFIDELERA

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68293; Mature: 68161

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGQNLSAWIDGPCGGRCGREAEGGATAGTAGDLPRWDLGDLYDSPESDRLRTDLNQAEA
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
DAAAFADVWRGRLAGASPAALAEAIAEYQRIDEVLGRAASYAQLLFAGDSSDAAIGRFSQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
SVNERLTDISTHLLFFTLELNRIGDDEMAARLADPALAVWAPFLRDLRVFRPHQLSDEIE
HHHHHHHHHHHHHHEEEEEHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHH
QVLHEKSVTGAAAWCRLFDETMAGLRIPLDDSRLTVGEALNRLSDPDRAVRERAARAIGA
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
VFGDNIRLFSLITNTLAKDKAISDSLRHYPRPGSYRNRSNMVEDEVVDALVQAVTTDYPR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
LSHRYYALKAKWLGLEKLEHWDRNAPLPSADDRIIPWDQATRQVLAAYEAFDPRMGTVAR
HHHHEEEEHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
RFFDHAWIDAAPAPGKASGAFAHPTVPSVHPYLLLNYHGRTRDVMTLAHELGHGVHQVLA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
APHGYLMSGTPLTLAETASVFGEMLTFRALLDAETDPARRRLMLAAKVEDMLNTVVRQIA
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FYRFETLVHAERKSGELLPERIGAIWRQVQTESLGPAFNFTPDYDVYWTYVPHFIHSPFY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCHH
VYAYAFGDCLVNALYGVFQSGHAGFQDKYLDMLRAGGTMRHRELLAPFGLDAADPGFWRK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHH
GLDVIAGFIDELERA
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGQNLSAWIDGPCGGRCGREAEGGATAGTAGDLPRWDLGDLYDSPESDRLRTDLNQAEA
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
DAAAFADVWRGRLAGASPAALAEAIAEYQRIDEVLGRAASYAQLLFAGDSSDAAIGRFSQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
SVNERLTDISTHLLFFTLELNRIGDDEMAARLADPALAVWAPFLRDLRVFRPHQLSDEIE
HHHHHHHHHHHHHHEEEEEHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHH
QVLHEKSVTGAAAWCRLFDETMAGLRIPLDDSRLTVGEALNRLSDPDRAVRERAARAIGA
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
VFGDNIRLFSLITNTLAKDKAISDSLRHYPRPGSYRNRSNMVEDEVVDALVQAVTTDYPR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
LSHRYYALKAKWLGLEKLEHWDRNAPLPSADDRIIPWDQATRQVLAAYEAFDPRMGTVAR
HHHHEEEEHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
RFFDHAWIDAAPAPGKASGAFAHPTVPSVHPYLLLNYHGRTRDVMTLAHELGHGVHQVLA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
APHGYLMSGTPLTLAETASVFGEMLTFRALLDAETDPARRRLMLAAKVEDMLNTVVRQIA
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FYRFETLVHAERKSGELLPERIGAIWRQVQTESLGPAFNFTPDYDVYWTYVPHFIHSPFY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCHH
VYAYAFGDCLVNALYGVFQSGHAGFQDKYLDMLRAGGTMRHRELLAPFGLDAADPGFWRK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHH
GLDVIAGFIDELERA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]